Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 UPS1YLR193C 528 nt0.92□□□□□ -2.26
NIF3P53081 HCH1YNL281W 462 nt0.92□□□□□ -2.26
NIF3P53081 SCW11YGL028C 1629 nt0.92□□□□□ -2.26
NIF3P53081 ANS1YHR126C 480 nt0.91□□□□□ -2.26
NIF3P53081 YJL020W-AYJL020W-A 258 nt0.91□□□□□ -2.26
NIF3P53081 YKL202WYKL202W 582 nt0.91□□□□□ -2.26
NIF3P53081 ROM2YLR371W 4071 nt0.9□□□□□ -2.27
NIF3P53081 MRPL50YNR022C 420 nt0.9□□□□□ -2.27
NIF3P53081 YBR012CYBR012C 420 nt0.9□□□□□ -2.27
NIF3P53081 BEM2YER155C 6504 nt0.9□□□□□ -2.27
NIF3P53081 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
NIF3P53081 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
NIF3P53081 SET3YKR029C 2256 nt0.89□□□□□ -2.27
NIF3P53081 AIM9YER080W 1884 nt0.88□□□□□ -2.27
NIF3P53081 YLR456WYLR456W 615 nt0.88□□□□□ -2.27
NIF3P53081 YML003WYML003W 873 nt0.88□□□□□ -2.27
NIF3P53081 YMR242W-AYMR242W-A 90 nt0.88□□□□□ -2.27
NIF3P53081 YBR221W-AYBR221W-A 105 nt0.88□□□□□ -2.27
NIF3P53081 Q0017Q0017 162 nt0.88□□□□□ -2.27
NIF3P53081 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
NIF3P53081 AIM44YPL158C 2277 nt0.87□□□□□ -2.27
NIF3P53081 SDH7YDR511W 402 nt0.87□□□□□ -2.27
NIF3P53081 tV(UAC)BtV(UAC)B 74 nt0.87□□□□□ -2.27
NIF3P53081 tV(UAC)DtV(UAC)D 74 nt0.87□□□□□ -2.27
NIF3P53081 RRT1YBL048W 312 nt0.87□□□□□ -2.27
NIF3P53081 LCD1YDR499W 2244 nt0.87□□□□□ -2.27
NIF3P53081 IML1YJR138W 4755 nt0.87□□□□□ -2.27
NIF3P53081 FIG4YNL325C 2640 nt0.86□□□□□ -2.27
NIF3P53081 KAP120YPL125W 3099 nt0.86□□□□□ -2.27
NIF3P53081 NPC2YDL046W 522 nt0.86□□□□□ -2.27
NIF3P53081 EMT1tM(CAU)D 73 nt0.86□□□□□ -2.27
NIF3P53081 EMT5tM(CAU)J1 73 nt0.86□□□□□ -2.27
NIF3P53081 EMT3tM(CAU)J2 73 nt0.86□□□□□ -2.27
NIF3P53081 EMT4tM(CAU)M 73 nt0.86□□□□□ -2.27
NIF3P53081 EMT2tM(CAU)O2 73 nt0.86□□□□□ -2.27
NIF3P53081 YJL007CYJL007C 315 nt0.86□□□□□ -2.27
NIF3P53081 YPL229WYPL229W 621 nt0.86□□□□□ -2.27
NIF3P53081 ZIP2YGL249W 2115 nt0.86□□□□□ -2.27
NIF3P53081 SLD3YGL113W 2007 nt0.86□□□□□ -2.27
NIF3P53081 SLI15YBR156C 2097 nt0.85□□□□□ -2.27
NIF3P53081 NUP157YER105C 4176 nt0.85□□□□□ -2.27
NIF3P53081 RPS24BYIL069C 408 nt0.85□□□□□ -2.27
NIF3P53081 YJR003CYJR003C 1560 nt0.85□□□□□ -2.27
NIF3P53081 YPR117WYPR117W 7470 nt0.85□□□□□ -2.27
NIF3P53081 MMS4YBR098W 2076 nt0.84□□□□□ -2.27
NIF3P53081 STO1YMR125W 2586 nt0.84□□□□□ -2.27
NIF3P53081 YAP6YDR259C 1152 nt0.84□□□□□ -2.27
NIF3P53081 YJL135WYJL135W 318 nt0.84□□□□□ -2.27
NIF3P53081 YOR108C-AYOR108C-A 210 nt0.84□□□□□ -2.27
NIF3P53081 RPB10YOR210W 213 nt0.84□□□□□ -2.27
NIF3P53081 PDE2YOR360C 1581 nt0.83□□□□□ -2.28
NIF3P53081 BUD3YCL014W 4911 nt0.83□□□□□ -2.28
NIF3P53081 YHL041WYHL041W 450 nt0.83□□□□□ -2.28
NIF3P53081 RPL26AYLR344W 384 nt0.83□□□□□ -2.28
NIF3P53081 YPL261CYPL261C 309 nt0.83□□□□□ -2.28
NIF3P53081 YGR130CYGR130C 2451 nt0.82□□□□□ -2.28
NIF3P53081 SMC1YFL008W 3678 nt0.82□□□□□ -2.28
NIF3P53081 COG4YPR105C 2586 nt0.82□□□□□ -2.28
NIF3P53081 snR72snR72 98 nt0.82□□□□□ -2.28
NIF3P53081 YKL083WYKL083W 615 nt0.82□□□□□ -2.28
NIF3P53081 YAR047CYAR047C 321 nt0.82□□□□□ -2.28
NIF3P53081 YOL160WYOL160W 342 nt0.82□□□□□ -2.28
NIF3P53081 YOR199WYOR199W 330 nt0.82□□□□□ -2.28
NIF3P53081 YBR200W-AYBR200W-A 165 nt0.82□□□□□ -2.28
NIF3P53081 snR51snR51 107 nt0.82□□□□□ -2.28
NIF3P53081 YDR169C-AYDR169C-A 150 nt0.81□□□□□ -2.28
NIF3P53081 YLR202CYLR202C 327 nt0.81□□□□□ -2.28
NIF3P53081 YLR406C-AYLR406C-A 150 nt0.81□□□□□ -2.28
NIF3P53081 ISF1YMR081C 1017 nt0.81□□□□□ -2.28
NIF3P53081 YMR290W-AYMR290W-A 348 nt0.81□□□□□ -2.28
NIF3P53081 IFH1YLR223C 3258 nt0.81□□□□□ -2.28
NIF3P53081 PCF11YDR228C 1881 nt0.81□□□□□ -2.28
NIF3P53081 RIM20YOR275C 1986 nt0.81□□□□□ -2.28
NIF3P53081 PAN2YGL094C 3348 nt0.8□□□□□ -2.28
NIF3P53081 YKL063CYKL063C 504 nt0.8□□□□□ -2.28
NIF3P53081 IRC23YOR044W 474 nt0.8□□□□□ -2.28
NIF3P53081 YPL185WYPL185W 396 nt0.79□□□□□ -2.28
NIF3P53081 YPL205CYPL205C 345 nt0.79□□□□□ -2.28
NIF3P53081 TTI1YKL033W 3117 nt0.79□□□□□ -2.28
NIF3P53081 RAD34YDR314C 2079 nt0.79□□□□□ -2.28
NIF3P53081 YPL068CYPL068C 882 nt0.78□□□□□ -2.28
NIF3P53081 YDL206WYDL206W 2289 nt0.78□□□□□ -2.28
NIF3P53081 INP2YMR163C 2118 nt0.77□□□□□ -2.29
NIF3P53081 YGR042WYGR042W 816 nt0.77□□□□□ -2.29
NIF3P53081 YNL058CYNL058C 951 nt0.77□□□□□ -2.29
NIF3P53081 YAR009CYAR009C 3591 nt0.77□□□□□ -2.29
NIF3P53081 YDL073WYDL073W 2955 nt0.76□□□□□ -2.29
NIF3P53081 ATG31YDR022C 591 nt0.76□□□□□ -2.29
NIF3P53081 YGR174W-AYGR174W-A 87 nt0.76□□□□□ -2.29
NIF3P53081 YLR434CYLR434C 384 nt0.76□□□□□ -2.29
NIF3P53081 PAU24YBR301W 363 nt0.76□□□□□ -2.29
NIF3P53081 GEA2YEL022W 4380 nt0.75□□□□□ -2.29
NIF3P53081 GPG1YGL121C 381 nt0.75□□□□□ -2.29
NIF3P53081 YHL042WYHL042W 453 nt0.75□□□□□ -2.29
NIF3P53081 NIP100YPL174C 2607 nt0.75□□□□□ -2.29
NIF3P53081 WAR1YML076C 2835 nt0.74□□□□□ -2.29
NIF3P53081 PRP16YKR086W 3216 nt0.74□□□□□ -2.29
NIF3P53081 YIR044CYIR044C 186 nt0.74□□□□□ -2.29
NIF3P53081 YBL008W-AYBL008W-A 240 nt0.74□□□□□ -2.29
NIF3P53081 PRM3YPL192C 402 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms