Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 YER023C-AYER023C-A 213 nt0.75□□□□□ -2.29
TRM9P49957 tR(UCU)Q1tR(UCU)Q1 73 nt0.75□□□□□ -2.29
TRM9P49957 MRPL31YKL138C 396 nt0.75□□□□□ -2.29
TRM9P49957 RPL32YBL092W 393 nt0.75□□□□□ -2.29
TRM9P49957 LCD1YDR499W 2244 nt0.74□□□□□ -2.29
TRM9P49957 YDL073WYDL073W 2955 nt0.74□□□□□ -2.29
TRM9P49957 YAP3YHL009C 993 nt0.74□□□□□ -2.29
TRM9P49957 NBL1YHR199C-A 222 nt0.74□□□□□ -2.29
TRM9P49957 YKL123WYKL123W 381 nt0.74□□□□□ -2.29
TRM9P49957 TSC3YBR058C-A 243 nt0.74□□□□□ -2.29
TRM9P49957 YDR269CYDR269C 324 nt0.73□□□□□ -2.29
TRM9P49957 YER076W-AYER076W-A 348 nt0.73□□□□□ -2.29
TRM9P49957 RRT1YBL048W 312 nt0.73□□□□□ -2.29
TRM9P49957 YER135CYER135C 393 nt0.72□□□□□ -2.29
TRM9P49957 BIG1YHR101C 1008 nt0.72□□□□□ -2.29
TRM9P49957 SLI15YBR156C 2097 nt0.72□□□□□ -2.29
TRM9P49957 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
TRM9P49957 YMR160WYMR160W 2451 nt0.71□□□□□ -2.3
TRM9P49957 YDR029WYDR029W 315 nt0.7□□□□□ -2.3
TRM9P49957 RPL9AYGL147C 576 nt0.7□□□□□ -2.3
TRM9P49957 YKL145W-AYKL145W-A 93 nt0.7□□□□□ -2.3
TRM9P49957 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
TRM9P49957 YPL182CYPL182C 384 nt0.7□□□□□ -2.3
TRM9P49957 SLD3YGL113W 2007 nt0.69□□□□□ -2.3
TRM9P49957 EFR3YMR212C 2349 nt0.69□□□□□ -2.3
TRM9P49957 NPC2YDL046W 522 nt0.69□□□□□ -2.3
TRM9P49957 URM1YIL008W 300 nt0.69□□□□□ -2.3
TRM9P49957 YDL196WYDL196W 330 nt0.68□□□□□ -2.3
TRM9P49957 YHR139C-AYHR139C-A 312 nt0.68□□□□□ -2.3
TRM9P49957 RPS27AYKL156W 249 nt0.68□□□□□ -2.3
TRM9P49957 YPR153WYPR153W 423 nt0.68□□□□□ -2.3
TRM9P49957 PRP16YKR086W 3216 nt0.67□□□□□ -2.3
TRM9P49957 NHP2YDL208W 471 nt0.67□□□□□ -2.3
TRM9P49957 CMC4YMR194C-B 222 nt0.67□□□□□ -2.3
TRM9P49957 YOR108C-AYOR108C-A 210 nt0.67□□□□□ -2.3
TRM9P49957 WAR1YML076C 2835 nt0.67□□□□□ -2.3
TRM9P49957 PAN2YGL094C 3348 nt0.67□□□□□ -2.3
TRM9P49957 ZIP2YGL249W 2115 nt0.67□□□□□ -2.3
TRM9P49957 YCR001WYCR001W 315 nt0.66□□□□□ -2.3
TRM9P49957 YIL066W-AYIL066W-A 444 nt0.66□□□□□ -2.3
TRM9P49957 ISF1YMR081C 1017 nt0.66□□□□□ -2.3
TRM9P49957 YDR521WYDR521W 336 nt0.65□□□□□ -2.31
TRM9P49957 YER087C-AYER087C-A 552 nt0.65□□□□□ -2.31
TRM9P49957 GEA2YEL022W 4380 nt0.64□□□□□ -2.31
TRM9P49957 WIP1YDR374W-A 270 nt0.64□□□□□ -2.31
TRM9P49957 ISD11YER048W-A 285 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
TRM9P49957 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
TRM9P49957 YKL202WYKL202W 582 nt0.64□□□□□ -2.31
TRM9P49957 GPI15YNL038W 690 nt0.64□□□□□ -2.31
TRM9P49957 YBR076C-AYBR076C-A 267 nt0.64□□□□□ -2.31
TRM9P49957 ALG13YGL047W 609 nt0.63□□□□□ -2.31
TRM9P49957 EAF6YJR082C 342 nt0.63□□□□□ -2.31
TRM9P49957 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
TRM9P49957 YMR290W-AYMR290W-A 348 nt0.63□□□□□ -2.31
TRM9P49957 DBP6YNR038W 1890 nt0.63□□□□□ -2.31
TRM9P49957 SWF1YDR126W 1011 nt0.62□□□□□ -2.31
TRM9P49957 GPG1YGL121C 381 nt0.62□□□□□ -2.31
TRM9P49957 PBI2YNL015W 228 nt0.62□□□□□ -2.31
TRM9P49957 IES4YOR189W 351 nt0.62□□□□□ -2.31
TRM9P49957 YPR159C-AYPR159C-A 102 nt0.62□□□□□ -2.31
TRM9P49957 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
TRM9P49957 TIM13YGR181W 318 nt0.6□□□□□ -2.31
TRM9P49957 YJL135WYJL135W 318 nt0.6□□□□□ -2.31
TRM9P49957 NFU1YKL040C 771 nt0.6□□□□□ -2.31
TRM9P49957 YLR269CYLR269C 351 nt0.6□□□□□ -2.31
TRM9P49957 YGR042WYGR042W 816 nt0.59□□□□□ -2.31
TRM9P49957 YHL042WYHL042W 453 nt0.59□□□□□ -2.31
TRM9P49957 ULP2YIL031W 3105 nt0.58□□□□□ -2.32
TRM9P49957 YOL160WYOL160W 342 nt0.58□□□□□ -2.32
TRM9P49957 RPB10YOR210W 213 nt0.58□□□□□ -2.32
TRM9P49957 YOR282WYOR282W 321 nt0.58□□□□□ -2.32
TRM9P49957 YPL261CYPL261C 309 nt0.58□□□□□ -2.32
TRM9P49957 LOA1YPR139C 903 nt0.58□□□□□ -2.32
TRM9P49957 EMC4YGL231C 573 nt0.57□□□□□ -2.32
TRM9P49957 YHR063W-AYHR063W-A 336 nt0.57□□□□□ -2.32
TRM9P49957 PKH2YOL100W 3246 nt0.56□□□□□ -2.32
TRM9P49957 RPF1YHR088W 888 nt0.56□□□□□ -2.32
TRM9P49957 YHR125WYHR125W 306 nt0.56□□□□□ -2.32
TRM9P49957 YML108WYML108W 318 nt0.56□□□□□ -2.32
TRM9P49957 YOR218CYOR218C 420 nt0.56□□□□□ -2.32
TRM9P49957 LTE1YAL024C 4308 nt0.56□□□□□ -2.32
TRM9P49957 STE18YJR086W 333 nt0.55□□□□□ -2.32
TRM9P49957 TRS65YGR166W 1683 nt0.54□□□□□ -2.32
TRM9P49957 YDL011CYDL011C 324 nt0.54□□□□□ -2.32
TRM9P49957 ECM12YHR021W-A 456 nt0.54□□□□□ -2.32
TRM9P49957 RKR1YMR247C 4689 nt0.54□□□□□ -2.32
TRM9P49957 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
TRM9P49957 YHR130CYHR130C 336 nt0.53□□□□□ -2.32
TRM9P49957 YIR044CYIR044C 186 nt0.53□□□□□ -2.32
TRM9P49957 YMR141W-AYMR141W-A 225 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 41 ms