Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 YPR153WYPR153W 423 nt0.49□□□□□ -2.33
TDA4P47153 RFX1YLR176C 2436 nt0.49□□□□□ -2.33
TDA4P47153 NPC2YDL046W 522 nt0.48□□□□□ -2.33
TDA4P47153 YFR009W-AYFR009W-A 258 nt0.48□□□□□ -2.33
TDA4P47153 VMA21YGR105W 234 nt0.48□□□□□ -2.33
TDA4P47153 YIL059CYIL059C 366 nt0.48□□□□□ -2.33
TDA4P47153 YIR018C-AYIR018C-A 138 nt0.48□□□□□ -2.33
TDA4P47153 INA22YIR024C 651 nt0.48□□□□□ -2.33
TDA4P47153 YHR063W-AYHR063W-A 336 nt0.47□□□□□ -2.33
TDA4P47153 YML002WYML002W 2214 nt0.46□□□□□ -2.34
TDA4P47153 UTP20YBL004W 7482 nt0.46□□□□□ -2.34
TDA4P47153 ECM12YHR021W-A 456 nt0.46□□□□□ -2.34
TDA4P47153 YKL023C-AYKL023C-A 228 nt0.46□□□□□ -2.34
TDA4P47153 YKL068W-AYKL068W-A 237 nt0.46□□□□□ -2.34
TDA4P47153 YJR003CYJR003C 1560 nt0.45□□□□□ -2.34
TDA4P47153 URM1YIL008W 300 nt0.45□□□□□ -2.34
TDA4P47153 YKL044WYKL044W 321 nt0.45□□□□□ -2.34
TDA4P47153 RPL38YLR325C 237 nt0.45□□□□□ -2.34
TDA4P47153 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
TDA4P47153 YDR269CYDR269C 324 nt0.44□□□□□ -2.34
TDA4P47153 YER087C-AYER087C-A 552 nt0.44□□□□□ -2.34
TDA4P47153 APQ13YJL075C 417 nt0.44□□□□□ -2.34
TDA4P47153 RCN2YOR220W 798 nt0.44□□□□□ -2.34
TDA4P47153 BFR2YDR299W 1605 nt0.44□□□□□ -2.34
TDA4P47153 ISD11YER048W-A 285 nt0.43□□□□□ -2.34
TDA4P47153 YER135CYER135C 393 nt0.43□□□□□ -2.34
TDA4P47153 HUR1YGL168W 333 nt0.43□□□□□ -2.34
TDA4P47153 PHS1YJL097W 654 nt0.43□□□□□ -2.34
TDA4P47153 YGL239CYGL239C 315 nt0.42□□□□□ -2.34
TDA4P47153 ZIP2YGL249W 2115 nt0.41□□□□□ -2.34
TDA4P47153 Q0255Q0255 1419 nt0.41□□□□□ -2.34
TDA4P47153 BER1YLR412W 825 nt0.41□□□□□ -2.34
TDA4P47153 YLL007CYLL007C 1998 nt0.41□□□□□ -2.34
TDA4P47153 YGR025WYGR025W 303 nt0.4□□□□□ -2.35
TDA4P47153 SVS1YPL163C 783 nt0.4□□□□□ -2.35
TDA4P47153 tF(GAA)BtF(GAA)B 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)FtF(GAA)F 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)GtF(GAA)G 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)H1tF(GAA)H1 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)H2tF(GAA)H2 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)MtF(GAA)M 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)P1tF(GAA)P1 73 nt0.39□□□□□ -2.35
TDA4P47153 tF(GAA)P2tF(GAA)P2 73 nt0.39□□□□□ -2.35
TDA4P47153 GPG1YGL121C 381 nt0.39□□□□□ -2.35
TDA4P47153 RPL9AYGL147C 576 nt0.39□□□□□ -2.35
TDA4P47153 snR13snR13 124 nt0.39□□□□□ -2.35
TDA4P47153 EFR3YMR212C 2349 nt0.38□□□□□ -2.35
TDA4P47153 YJR141WYJR141W 1044 nt0.38□□□□□ -2.35
TDA4P47153 LOA1YPR139C 903 nt0.38□□□□□ -2.35
TDA4P47153 YSP1YHR155W 3687 nt0.37□□□□□ -2.35
TDA4P47153 YMR141W-AYMR141W-A 225 nt0.37□□□□□ -2.35
TDA4P47153 YOR218CYOR218C 420 nt0.37□□□□□ -2.35
TDA4P47153 YOR282WYOR282W 321 nt0.37□□□□□ -2.35
TDA4P47153 CHS6YJL099W 2241 nt0.36□□□□□ -2.35
TDA4P47153 YDR344CYDR344C 444 nt0.36□□□□□ -2.35
TDA4P47153 YJL135WYJL135W 318 nt0.36□□□□□ -2.35
TDA4P47153 NPR2YEL062W 1848 nt0.36□□□□□ -2.35
TDA4P47153 SNU56YDR240C 1479 nt0.35□□□□□ -2.35
TDA4P47153 PKH2YOL100W 3246 nt0.35□□□□□ -2.35
TDA4P47153 ULP2YIL031W 3105 nt0.35□□□□□ -2.35
TDA4P47153 PMP1YCR024C-A 123 nt0.35□□□□□ -2.35
TDA4P47153 YDL016CYDL016C 303 nt0.35□□□□□ -2.35
TDA4P47153 RPB10YOR210W 213 nt0.35□□□□□ -2.35
TDA4P47153 PAN2YGL094C 3348 nt0.35□□□□□ -2.35
TDA4P47153 YDR029WYDR029W 315 nt0.34□□□□□ -2.36
TDA4P47153 YHL042WYHL042W 453 nt0.34□□□□□ -2.36
TDA4P47153 YIL066W-AYIL066W-A 444 nt0.34□□□□□ -2.36
TDA4P47153 RPS27AYKL156W 249 nt0.34□□□□□ -2.36
TDA4P47153 UBX4YMR067C 1251 nt0.34□□□□□ -2.36
TDA4P47153 YOR108C-AYOR108C-A 210 nt0.34□□□□□ -2.36
TDA4P47153 TSC3YBR058C-A 243 nt0.34□□□□□ -2.36
TDA4P47153 YIL134C-AYIL134C-A 204 nt0.33□□□□□ -2.36
TDA4P47153 YKL145W-AYKL145W-A 93 nt0.33□□□□□ -2.36
TDA4P47153 CDC33YOL139C 642 nt0.33□□□□□ -2.36
TDA4P47153 NOP9YJL010C 2001 nt0.32□□□□□ -2.36
TDA4P47153 HMLALPHA2YCL067C 633 nt0.32□□□□□ -2.36
TDA4P47153 MATALPHA2YCR039C 633 nt0.32□□□□□ -2.36
TDA4P47153 YMR290W-AYMR290W-A 348 nt0.32□□□□□ -2.36
TDA4P47153 FMP27YLR454W 7887 nt0.32□□□□□ -2.36
TDA4P47153 YCK3YER123W 1575 nt0.32□□□□□ -2.36
TDA4P47153 RPL26BYGR034W 384 nt0.31□□□□□ -2.36
TDA4P47153 RPS24BYIL069C 408 nt0.31□□□□□ -2.36
TDA4P47153 snR72snR72 98 nt0.3□□□□□ -2.36
TDA4P47153 ABF2YMR072W 552 nt0.3□□□□□ -2.36
TDA4P47153 BIG1YHR101C 1008 nt0.29□□□□□ -2.36
TDA4P47153 YPL182CYPL182C 384 nt0.28□□□□□ -2.36
TDA4P47153 WIP1YDR374W-A 270 nt0.27□□□□□ -2.37
TDA4P47153 SBH1YER087C-B 249 nt0.27□□□□□ -2.37
TDA4P47153 TIM13YGR181W 318 nt0.27□□□□□ -2.37
TDA4P47153 YKL202WYKL202W 582 nt0.27□□□□□ -2.37
TDA4P47153 YBL008W-AYBL008W-A 240 nt0.27□□□□□ -2.37
TDA4P47153 BSC3YLR465C 309 nt0.27□□□□□ -2.37
TDA4P47153 YOL160WYOL160W 342 nt0.27□□□□□ -2.37
TDA4P47153 YPL044CYPL044C 549 nt0.27□□□□□ -2.37
TDA4P47153 YBR076C-AYBR076C-A 267 nt0.27□□□□□ -2.37
TDA4P47153 AI1Q0050 2505 nt0.27□□□□□ -2.37
TDA4P47153 UBC7YMR022W 498 nt0.26□□□□□ -2.37
TDA4P47153 RAD34YDR314C 2079 nt0.25□□□□□ -2.37
TDA4P47153 TRS65YGR166W 1683 nt0.25□□□□□ -2.37
TDA4P47153 YEL030C-AYEL030C-A 315 nt0.25□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms