Protein–RNA interactions for Protein: P38871

SSP1, Sporulation-specific protein 1, yeastyeast

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSP1P38871 NUP159YIL115C 4383 nt3.79□□□□□ -1.8
SSP1P38871 YAL037C-AYAL037C-A 93 nt3.79□□□□□ -1.8
SSP1P38871 RDS1YCR106W 2499 nt3.79□□□□□ -1.8
SSP1P38871 LRG1YDL240W 3054 nt3.79□□□□□ -1.8
SSP1P38871 SMC6YLR383W 3345 nt3.78□□□□□ -1.8
SSP1P38871 TAF1YGR274C 3201 nt3.78□□□□□ -1.8
SSP1P38871 MLH1YMR167W 2310 nt3.78□□□□□ -1.8
SSP1P38871 SCP160YJL080C 3669 nt3.78□□□□□ -1.8
SSP1P38871 UBP15YMR304W 3693 nt3.78□□□□□ -1.8
SSP1P38871 UTP8YGR128C 2142 nt3.77□□□□□ -1.81
SSP1P38871 YBT1YLL048C 4986 nt3.77□□□□□ -1.81
SSP1P38871 YJR039WYJR039W 3366 nt3.76□□□□□ -1.81
SSP1P38871 ISW1YBR245C 3390 nt3.76□□□□□ -1.81
SSP1P38871 snR39BsnR39B 96 nt3.74□□□□□ -1.81
SSP1P38871 BUD2YKL092C 3315 nt3.74□□□□□ -1.81
SSP1P38871 MSH5YDL154W 2706 nt3.74□□□□□ -1.81
SSP1P38871 PKH2YOL100W 3246 nt3.73□□□□□ -1.81
SSP1P38871 RAD26YJR035W 3258 nt3.73□□□□□ -1.81
SSP1P38871 YGL063C-AYGL063C-A 150 nt3.72□□□□□ -1.81
SSP1P38871 YBL039C-AYBL039C-A 84 nt3.72□□□□□ -1.81
SSP1P38871 HMI1YOL095C 2121 nt3.72□□□□□ -1.81
SSP1P38871 TRS120YDR407C 3870 nt3.72□□□□□ -1.81
SSP1P38871 MET18YIL128W 3099 nt3.72□□□□□ -1.81
SSP1P38871 SLA1YBL007C 3735 nt3.71□□□□□ -1.81
SSP1P38871 UBP1YDL122W 2430 nt3.71□□□□□ -1.82
SSP1P38871 AMS1YGL156W 3252 nt3.71□□□□□ -1.82
SSP1P38871 YLR278CYLR278C 4026 nt3.71□□□□□ -1.82
SSP1P38871 BFR2YDR299W 1605 nt3.7□□□□□ -1.82
SSP1P38871 SPA2YLL021W 4401 nt3.7□□□□□ -1.82
SSP1P38871 RPL37BYDR500C 267 nt3.7□□□□□ -1.82
SSP1P38871 AUS1YOR011W 4185 nt3.7□□□□□ -1.82
SSP1P38871 JSN1YJR091C 3276 nt3.69□□□□□ -1.82
SSP1P38871 YPP1YGR198W 2454 nt3.69□□□□□ -1.82
SSP1P38871 MRD1YPR112C 2664 nt3.68□□□□□ -1.82
SSP1P38871 CAF120YNL278W 3183 nt3.68□□□□□ -1.82
SSP1P38871 YGR109W-BYGR109W-B 4644 nt3.67□□□□□ -1.82
SSP1P38871 tV(CAC)DtV(CAC)D 73 nt3.66□□□□□ -1.82
SSP1P38871 tV(CAC)HtV(CAC)H 73 nt3.66□□□□□ -1.82
SSP1P38871 COG4YPR105C 2586 nt3.66□□□□□ -1.82
SSP1P38871 YDL206WYDL206W 2289 nt3.65□□□□□ -1.82
SSP1P38871 ARO1YDR127W 4767 nt3.65□□□□□ -1.83
SSP1P38871 YKL100W-AYKL100W-A 90 nt3.65□□□□□ -1.83
SSP1P38871 SLI15YBR156C 2097 nt3.65□□□□□ -1.83
SSP1P38871 URA2YJL130C 6645 nt3.64□□□□□ -1.83
SSP1P38871 YGL123C-AYGL123C-A 231 nt3.64□□□□□ -1.83
SSP1P38871 YPR108W-AYPR108W-A 213 nt3.64□□□□□ -1.83
SSP1P38871 TRS130YMR218C 3309 nt3.64□□□□□ -1.83
SSP1P38871 YOL019W-AYOL019W-A 153 nt3.63□□□□□ -1.83
SSP1P38871 UFD2YDL190C 2886 nt3.63□□□□□ -1.83
SSP1P38871 MDN1YLR106C 14733 nt3.63□□□□□ -1.83
SSP1P38871 YPL150WYPL150W 2706 nt3.63□□□□□ -1.83
SSP1P38871 SSM4YIL030C 3960 nt3.62□□□□□ -1.83
SSP1P38871 STU2YLR045C 2667 nt3.62□□□□□ -1.83
SSP1P38871 AGC1YPR021C 2709 nt3.62□□□□□ -1.83
SSP1P38871 TRM3YDL112W 4311 nt3.61□□□□□ -1.83
SSP1P38871 tM(CAU)Q2tM(CAU)Q2 78 nt3.61□□□□□ -1.83
SSP1P38871 YMR175W-AYMR175W-A 195 nt3.61□□□□□ -1.83
SSP1P38871 IST2YBR086C 2841 nt3.61□□□□□ -1.83
SSP1P38871 ADR1YDR216W 3972 nt3.6□□□□□ -1.83
SSP1P38871 TBS1YBR150C 3285 nt3.59□□□□□ -1.83
SSP1P38871 EAF1YDR359C 2949 nt3.58□□□□□ -1.84
SSP1P38871 SLX4YLR135W 2247 nt3.58□□□□□ -1.84
SSP1P38871 TAH1YCR060W 336 nt3.58□□□□□ -1.84
SSP1P38871 SPO71YDR104C 3738 nt3.58□□□□□ -1.84
SSP1P38871 AKR1YDR264C 2295 nt3.58□□□□□ -1.84
SSP1P38871 FLO1YAR050W 4614 nt3.58□□□□□ -1.84
SSP1P38871 NMD2YHR077C 3270 nt3.57□□□□□ -1.84
SSP1P38871 RRP5YMR229C 5190 nt3.57□□□□□ -1.84
SSP1P38871 CTR9YOL145C 3234 nt3.57□□□□□ -1.84
SSP1P38871 STU1YBL034C 4542 nt3.56□□□□□ -1.84
SSP1P38871 NUP100YKL068W 2880 nt3.56□□□□□ -1.84
SSP1P38871 YBR072C-AYBR072C-A 162 nt3.56□□□□□ -1.84
SSP1P38871 COG6YNL041C 2520 nt3.55□□□□□ -1.84
SSP1P38871 POL5YEL055C 3069 nt3.55□□□□□ -1.84
SSP1P38871 RAX2YLR084C 3663 nt3.55□□□□□ -1.84
SSP1P38871 NAB6YML117W 3405 nt3.54□□□□□ -1.84
SSP1P38871 CSR2YPR030W 3366 nt3.54□□□□□ -1.84
SSP1P38871 PAU10YDR542W 363 nt3.53□□□□□ -1.84
SSP1P38871 PAU11YGL261C 363 nt3.53□□□□□ -1.84
SSP1P38871 COX5BYIL111W 456 nt3.53□□□□□ -1.84
SSP1P38871 PAU4YLR461W 363 nt3.53□□□□□ -1.84
SSP1P38871 SSD1YDR293C 3753 nt3.53□□□□□ -1.84
SSP1P38871 PDR8YLR266C 2106 nt3.53□□□□□ -1.84
SSP1P38871 BIR1YJR089W 2865 nt3.53□□□□□ -1.85
SSP1P38871 YMR122W-AYMR122W-A 255 nt3.52□□□□□ -1.85
SSP1P38871 YNL266WYNL266W 420 nt3.52□□□□□ -1.85
SSP1P38871 GCN2YDR283C 4980 nt3.52□□□□□ -1.85
SSP1P38871 KAP120YPL125W 3099 nt3.52□□□□□ -1.85
SSP1P38871 POL3YDL102W 3294 nt3.52□□□□□ -1.85
SSP1P38871 YEL025CYEL025C 3567 nt3.51□□□□□ -1.85
SSP1P38871 STT4YLR305C 5703 nt3.5□□□□□ -1.85
SSP1P38871 RSM22YKL155C 1887 nt3.5□□□□□ -1.85
SSP1P38871 GCN1YGL195W 8019 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)DtK(UUU)D 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)G1tK(UUU)G1 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)G2tK(UUU)G2 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)KtK(UUU)K 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)LtK(UUU)L 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)OtK(UUU)O 73 nt3.49□□□□□ -1.85
SSP1P38871 tK(UUU)PtK(UUU)P 73 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms