Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 YOR011W-AYOR011W-A 207 nt2.78□□□□□ -1.96
SSF1P38789 YPR092WYPR092W 306 nt2.78□□□□□ -1.96
SSF1P38789 ZIP2YGL249W 2115 nt2.78□□□□□ -1.96
SSF1P38789 MSC6YOR354C 2079 nt2.78□□□□□ -1.96
SSF1P38789 SVL3YPL032C 2478 nt2.77□□□□□ -1.97
SSF1P38789 CTR9YOL145C 3234 nt2.77□□□□□ -1.97
SSF1P38789 YJL182CYJL182C 318 nt2.77□□□□□ -1.97
SSF1P38789 YLR294CYLR294C 330 nt2.77□□□□□ -1.97
SSF1P38789 SAP190YKR028W 3102 nt2.77□□□□□ -1.97
SSF1P38789 HMI1YOL095C 2121 nt2.76□□□□□ -1.97
SSF1P38789 HSH155YMR288W 2916 nt2.75□□□□□ -1.97
SSF1P38789 MLH3YPL164C 2148 nt2.75□□□□□ -1.97
SSF1P38789 SEC5YDR166C 2916 nt2.75□□□□□ -1.97
SSF1P38789 PUT3YKL015W 2940 nt2.75□□□□□ -1.97
SSF1P38789 MSH5YDL154W 2706 nt2.75□□□□□ -1.97
SSF1P38789 IRE1YHR079C 3348 nt2.74□□□□□ -1.97
SSF1P38789 YCR087C-AYCR087C-A 462 nt2.74□□□□□ -1.97
SSF1P38789 OLI1Q0130 231 nt2.74□□□□□ -1.97
SSF1P38789 YLR466C-BYLR466C-B 117 nt2.74□□□□□ -1.97
SSF1P38789 BUD2YKL092C 3315 nt2.74□□□□□ -1.97
SSF1P38789 AI5_ALPHAQ0070 1893 nt2.73□□□□□ -1.97
SSF1P38789 RLM1YPL089C 2031 nt2.73□□□□□ -1.97
SSF1P38789 YEL014CYEL014C 306 nt2.73□□□□□ -1.97
SSF1P38789 YMR194C-AYMR194C-A 225 nt2.73□□□□□ -1.97
SSF1P38789 TDA9YML081W 3756 nt2.73□□□□□ -1.97
SSF1P38789 MLH1YMR167W 2310 nt2.73□□□□□ -1.97
SSF1P38789 ENV11YGR071C 2583 nt2.72□□□□□ -1.97
SSF1P38789 BNR1YIL159W 4128 nt2.72□□□□□ -1.97
SSF1P38789 RAD34YDR314C 2079 nt2.72□□□□□ -1.97
SSF1P38789 RPL34BYIL052C 366 nt2.72□□□□□ -1.97
SSF1P38789 APL2YKL135C 2181 nt2.72□□□□□ -1.97
SSF1P38789 UBP15YMR304W 3693 nt2.72□□□□□ -1.97
SSF1P38789 ATG11YPR049C 3537 nt2.72□□□□□ -1.97
SSF1P38789 SAP185YJL098W 3177 nt2.71□□□□□ -1.97
SSF1P38789 MCM10YIL150C 1716 nt2.71□□□□□ -1.98
SSF1P38789 YBR182C-AYBR182C-A 195 nt2.71□□□□□ -1.98
SSF1P38789 SEC16YPL085W 6588 nt2.71□□□□□ -1.98
SSF1P38789 SPO75YLL005C 2607 nt2.71□□□□□ -1.98
SSF1P38789 YKU70YMR284W 1809 nt2.7□□□□□ -1.98
SSF1P38789 AGC1YPR021C 2709 nt2.7□□□□□ -1.98
SSF1P38789 DGR2YKL121W 2559 nt2.7□□□□□ -1.98
SSF1P38789 MAD1YGL086W 2250 nt2.7□□□□□ -1.98
SSF1P38789 YIR044CYIR044C 186 nt2.69□□□□□ -1.98
SSF1P38789 ELG1YOR144C 2376 nt2.68□□□□□ -1.98
SSF1P38789 YGR151CYGR151C 336 nt2.68□□□□□ -1.98
SSF1P38789 YIR030W-AYIR030W-A 384 nt2.68□□□□□ -1.98
SSF1P38789 CAT2YML042W 2013 nt2.68□□□□□ -1.98
SSF1P38789 FRK1YPL141C 2598 nt2.67□□□□□ -1.98
SSF1P38789 HER1YOR227W 3741 nt2.67□□□□□ -1.98
SSF1P38789 ATP7YKL016C 525 nt2.67□□□□□ -1.98
SSF1P38789 CHC1YGL206C 4962 nt2.67□□□□□ -1.98
SSF1P38789 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
SSF1P38789 YOR376WYOR376W 369 nt2.66□□□□□ -1.98
SSF1P38789 SGF11YPL047W 300 nt2.66□□□□□ -1.98
SSF1P38789 SPF1YEL031W 3648 nt2.66□□□□□ -1.98
SSF1P38789 UTP22YGR090W 3714 nt2.66□□□□□ -1.98
SSF1P38789 TOR1YJR066W 7413 nt2.65□□□□□ -1.98
SSF1P38789 RPS25BYLR333C 327 nt2.65□□□□□ -1.99
SSF1P38789 SEY1YOR165W 2331 nt2.65□□□□□ -1.99
SSF1P38789 PIG1YLR273C 1947 nt2.64□□□□□ -1.99
SSF1P38789 CUL3YGR003W 2235 nt2.64□□□□□ -1.99
SSF1P38789 NOC3YLR002C 1992 nt2.64□□□□□ -1.99
SSF1P38789 TFC3YAL001C 3483 nt2.64□□□□□ -1.99
SSF1P38789 PTP2YOR208W 2253 nt2.63□□□□□ -1.99
SSF1P38789 YDR182W-AYDR182W-A 204 nt2.63□□□□□ -1.99
SSF1P38789 SEC63YOR254C 1992 nt2.62□□□□□ -1.99
SSF1P38789 TRA1YHR099W 11235 nt2.62□□□□□ -1.99
SSF1P38789 snR74snR74 88 nt2.62□□□□□ -1.99
SSF1P38789 YHR180W-AYHR180W-A 183 nt2.62□□□□□ -1.99
SSF1P38789 YJL120WYJL120W 324 nt2.62□□□□□ -1.99
SSF1P38789 YLR342W-AYLR342W-A 174 nt2.62□□□□□ -1.99
SSF1P38789 YBR174CYBR174C 315 nt2.62□□□□□ -1.99
SSF1P38789 SPO21YOL091W 1830 nt2.62□□□□□ -1.99
SSF1P38789 YLR035C-AYLR035C-A 3468 nt2.62□□□□□ -1.99
SSF1P38789 RGA1YOR127W 3024 nt2.61□□□□□ -1.99
SSF1P38789 YDL118WYDL118W 381 nt2.61□□□□□ -1.99
SSF1P38789 YLL007CYLL007C 1998 nt2.6□□□□□ -1.99
SSF1P38789 YJL052C-AYJL052C-A 120 nt2.6□□□□□ -1.99
SSF1P38789 YKL165C-AYKL165C-A 234 nt2.6□□□□□ -1.99
SSF1P38789 YOR072W-BYOR072W-B 162 nt2.6□□□□□ -1.99
SSF1P38789 UFD4YKL010C 4452 nt2.6□□□□□ -1.99
SSF1P38789 YOR343W-BYOR343W-B 5313 nt2.59□□□□□ -1.99
SSF1P38789 ECM12YHR021W-A 456 nt2.59□□□□□ -1.99
SSF1P38789 YOL098CYOL098C 3114 nt2.58□□□□□ -2
SSF1P38789 MSH6YDR097C 3729 nt2.57□□□□□ -2
SSF1P38789 TOF1YNL273W 3717 nt2.56□□□□□ -2
SSF1P38789 RPL31AYDL075W 342 nt2.56□□□□□ -2
SSF1P38789 ULI1YFR026C 510 nt2.56□□□□□ -2
SSF1P38789 YLR140WYLR140W 327 nt2.56□□□□□ -2
SSF1P38789 ATG9YDL149W 2994 nt2.55□□□□□ -2
SSF1P38789 IRC8YJL051W 2469 nt2.55□□□□□ -2
SSF1P38789 IRA2YOL081W 9240 nt2.54□□□□□ -2
SSF1P38789 HIR3YJR140C 4947 nt2.54□□□□□ -2
SSF1P38789 YNL144CYNL144C 2223 nt2.53□□□□□ -2
SSF1P38789 SFB2YNL049C 2631 nt2.53□□□□□ -2
SSF1P38789 YJL150WYJL150W 303 nt2.53□□□□□ -2
SSF1P38789 YMR175W-AYMR175W-A 195 nt2.53□□□□□ -2
SSF1P38789 BRE1YDL074C 2103 nt2.53□□□□□ -2.01
SSF1P38789 DNF1YER166W 4716 nt2.53□□□□□ -2.01
SSF1P38789 SAC3YDR159W 3906 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms