Protein–RNA interactions for Protein: P38203

LSM2, U6 snRNA-associated Sm-like protein LSm2, yeastyeast

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM2P38203 GIM5YML094W 492 nt-0.76□□□□□ -2.53
LSM2P38203 YNL162W-AYNL162W-A 219 nt-0.76□□□□□ -2.53
LSM2P38203 RPS7BYNL096C 573 nt-0.77□□□□□ -2.53
LSM2P38203 YJL007CYJL007C 315 nt-0.78□□□□□ -2.53
LSM2P38203 YPR160W-AYPR160W-A 81 nt-0.78□□□□□ -2.53
LSM2P38203 DIE2YGR227W 1578 nt-0.79□□□□□ -2.54
LSM2P38203 MMS21YEL019C 804 nt-0.79□□□□□ -2.54
LSM2P38203 COX5BYIL111W 456 nt-0.79□□□□□ -2.54
LSM2P38203 PRP21YJL203W 843 nt-0.79□□□□□ -2.54
LSM2P38203 HTB2YBL002W 396 nt-0.79□□□□□ -2.54
LSM2P38203 YOR345CYOR345C 351 nt-0.79□□□□□ -2.54
LSM2P38203 VPS28YPL065W 729 nt-0.79□□□□□ -2.54
LSM2P38203 YBR076C-AYBR076C-A 267 nt-0.79□□□□□ -2.54
LSM2P38203 NIP1YMR309C 2439 nt-0.79□□□□□ -2.54
LSM2P38203 NPC2YDL046W 522 nt-0.8□□□□□ -2.54
LSM2P38203 YDL068WYDL068W 330 nt-0.8□□□□□ -2.54
LSM2P38203 GPG1YGL121C 381 nt-0.8□□□□□ -2.54
LSM2P38203 ARV1YLR242C 966 nt-0.8□□□□□ -2.54
LSM2P38203 MCM10YIL150C 1716 nt-0.81□□□□□ -2.54
LSM2P38203 NNF2YGR089W 2811 nt-0.81□□□□□ -2.54
LSM2P38203 YKL023C-AYKL023C-A 228 nt-0.82□□□□□ -2.54
LSM2P38203 ECM9YKR004C 1134 nt-0.82□□□□□ -2.54
LSM2P38203 YAL067W-AYAL067W-A 228 nt-0.82□□□□□ -2.54
LSM2P38203 YLL032CYLL032C 2478 nt-0.82□□□□□ -2.54
LSM2P38203 YDR008CYDR008C 351 nt-0.83□□□□□ -2.54
LSM2P38203 YER038W-AYER038W-A 381 nt-0.83□□□□□ -2.54
LSM2P38203 YFR012W-AYFR012W-A 87 nt-0.83□□□□□ -2.54
LSM2P38203 RMD6YEL072W 696 nt-0.84□□□□□ -2.54
LSM2P38203 RPL29YFR032C-A 180 nt-0.84□□□□□ -2.54
LSM2P38203 SVS1YPL163C 783 nt-0.84□□□□□ -2.54
LSM2P38203 YGL042CYGL042C 306 nt-0.85□□□□□ -2.55
LSM2P38203 YMR158C-AYMR158C-A 138 nt-0.85□□□□□ -2.55
LSM2P38203 MFA2YNL145W 117 nt-0.85□□□□□ -2.55
LSM2P38203 PET20YPL159C 762 nt-0.85□□□□□ -2.55
LSM2P38203 snR24snR24 89 nt-0.85□□□□□ -2.55
LSM2P38203 BI3Q0115 1554 nt-0.86□□□□□ -2.55
LSM2P38203 YCR022CYCR022C 345 nt-0.86□□□□□ -2.55
LSM2P38203 YBR064WYBR064W 429 nt-0.86□□□□□ -2.55
LSM2P38203 YLR198CYLR198C 360 nt-0.87□□□□□ -2.55
LSM2P38203 NIP100YPL174C 2607 nt-0.88□□□□□ -2.55
LSM2P38203 YJR079WYJR079W 330 nt-0.88□□□□□ -2.55
LSM2P38203 TFB6YOR352W 1032 nt-0.88□□□□□ -2.55
LSM2P38203 RFX1YLR176C 2436 nt-0.88□□□□□ -2.55
LSM2P38203 HTB1YDR224C 396 nt-0.89□□□□□ -2.55
LSM2P38203 MRPL31YKL138C 396 nt-0.89□□□□□ -2.55
LSM2P38203 YMR153C-AYMR153C-A 336 nt-0.89□□□□□ -2.55
LSM2P38203 YPL205CYPL205C 345 nt-0.89□□□□□ -2.55
LSM2P38203 YPR142CYPR142C 564 nt-0.89□□□□□ -2.55
LSM2P38203 GLG1YKR058W 1851 nt-0.9□□□□□ -2.55
LSM2P38203 PFS1YHR185C 714 nt-0.9□□□□□ -2.55
LSM2P38203 YPL185WYPL185W 396 nt-0.9□□□□□ -2.55
LSM2P38203 RUB1YDR139C 234 nt-0.91□□□□□ -2.56
LSM2P38203 AFB1YLR040C 675 nt-0.91□□□□□ -2.56
LSM2P38203 YPL119C-AYPL119C-A 264 nt-0.91□□□□□ -2.56
LSM2P38203 15S_rRNA15S_rRNA 1649 nt-0.91□□□□□ -2.56
LSM2P38203 PTP2YOR208W 2253 nt-0.92□□□□□ -2.56
LSM2P38203 YGL204CYGL204C 306 nt-0.92□□□□□ -2.56
LSM2P38203 YLR399W-AYLR399W-A 105 nt-0.92□□□□□ -2.56
LSM2P38203 ATP20YPR020W 348 nt-0.92□□□□□ -2.56
LSM2P38203 YER076W-AYER076W-A 348 nt-0.93□□□□□ -2.56
LSM2P38203 PAN3YKL025C 2040 nt-0.94□□□□□ -2.56
LSM2P38203 QCR7YDR529C 384 nt-0.94□□□□□ -2.56
LSM2P38203 YPR099CYPR099C 357 nt-0.94□□□□□ -2.56
LSM2P38203 BI4Q0120 1917 nt-0.95□□□□□ -2.56
LSM2P38203 tT(UGU)G1tT(UGU)G1 72 nt-0.95□□□□□ -2.56
LSM2P38203 tT(UGU)G2tT(UGU)G2 72 nt-0.95□□□□□ -2.56
LSM2P38203 tT(UGU)PtT(UGU)P 72 nt-0.95□□□□□ -2.56
LSM2P38203 snR33snR33 183 nt-0.95□□□□□ -2.56
LSM2P38203 snR79snR79 84 nt-0.96□□□□□ -2.56
LSM2P38203 TDA2YER071C 381 nt-0.96□□□□□ -2.56
LSM2P38203 YER138W-AYER138W-A 105 nt-0.96□□□□□ -2.56
LSM2P38203 YMR075C-AYMR075C-A 366 nt-0.96□□□□□ -2.56
LSM2P38203 GSP1YLR293C 660 nt-0.97□□□□□ -2.56
LSM2P38203 YDR290WYDR290W 330 nt-0.98□□□□□ -2.57
LSM2P38203 YNL067W-BYNL067W-B 141 nt-0.98□□□□□ -2.57
LSM2P38203 YBR121C-AYBR121C-A 159 nt-0.98□□□□□ -2.57
LSM2P38203 YPL060C-AYPL060C-A 3315 nt-0.99□□□□□ -2.57
LSM2P38203 PSF2YJL072C 642 nt-0.99□□□□□ -2.57
LSM2P38203 CMS1YLR003C 876 nt-0.99□□□□□ -2.57
LSM2P38203 YPR096CYPR096C 303 nt-0.99□□□□□ -2.57
LSM2P38203 RSM18YER050C 417 nt-1□□□□□ -2.57
LSM2P38203 ZIP2YGL249W 2115 nt-1□□□□□ -2.57
LSM2P38203 YCR024C-BYCR024C-B 267 nt-1.01□□□□□ -2.57
LSM2P38203 LSM4YER112W 564 nt-1.01□□□□□ -2.57
LSM2P38203 tN(GUU)QtN(GUU)Q 71 nt-1.01□□□□□ -2.57
LSM2P38203 YJL086CYJL086C 369 nt-1.01□□□□□ -2.57
LSM2P38203 YJL135WYJL135W 318 nt-1.01□□□□□ -2.57
LSM2P38203 YLR271WYLR271W 825 nt-1.01□□□□□ -2.57
LSM2P38203 COX7YMR256C 183 nt-1.01□□□□□ -2.57
LSM2P38203 SNU56YDR240C 1479 nt-1.01□□□□□ -2.57
LSM2P38203 YHL009W-BYHL009W-B 5409 nt-1.01□□□□□ -2.57
LSM2P38203 YHR131W-AYHR131W-A 246 nt-1.02□□□□□ -2.57
LSM2P38203 SDS22YKL193C 1017 nt-1.02□□□□□ -2.57
LSM2P38203 YLR146W-AYLR146W-A 189 nt-1.02□□□□□ -2.57
LSM2P38203 snR44snR44 211 nt-1.02□□□□□ -2.57
LSM2P38203 RSM23YGL129C 1353 nt-1.03□□□□□ -2.57
LSM2P38203 YAP6YDR259C 1152 nt-1.03□□□□□ -2.57
LSM2P38203 UBS1YBR165W 834 nt-1.03□□□□□ -2.57
LSM2P38203 PAA1YDR071C 576 nt-1.04□□□□□ -2.58
LSM2P38203 SEM1YDR363W-A 270 nt-1.04□□□□□ -2.58
Retrieved 100 of 7,029 protein–RNA pairs in 77 ms