Protein–RNA interactions for Protein: P38200

SHE1, Mitotic spindle-associated protein SHE1, yeastyeast

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE1P38200 snR72snR72 98 nt1.21□□□□□ -2.22
SHE1P38200 YDR182W-AYDR182W-A 204 nt1.21□□□□□ -2.22
SHE1P38200 EMC5YIL027C 426 nt1.21□□□□□ -2.22
SHE1P38200 tW(UCA)QtW(UCA)Q 74 nt1.21□□□□□ -2.22
SHE1P38200 CDC31YOR257W 486 nt1.21□□□□□ -2.22
SHE1P38200 SGO1YOR073W 1773 nt1.21□□□□□ -2.22
SHE1P38200 NCA2YPR155C 1851 nt1.2□□□□□ -2.22
SHE1P38200 YGR109W-BYGR109W-B 4644 nt1.2□□□□□ -2.22
SHE1P38200 YGL217CYGL217C 342 nt1.2□□□□□ -2.22
SHE1P38200 RPL40BYKR094C 387 nt1.2□□□□□ -2.22
SHE1P38200 TIM18YOR297C 579 nt1.2□□□□□ -2.22
SHE1P38200 BIL1YOR304C-A 231 nt1.2□□□□□ -2.22
SHE1P38200 SLX4YLR135W 2247 nt1.2□□□□□ -2.22
SHE1P38200 SPC98YNL126W 2541 nt1.2□□□□□ -2.22
SHE1P38200 KCS1YDR017C 3153 nt1.2□□□□□ -2.22
SHE1P38200 POL5YEL055C 3069 nt1.19□□□□□ -2.22
SHE1P38200 YAL063C-AYAL063C-A 291 nt1.19□□□□□ -2.22
SHE1P38200 YMR175W-AYMR175W-A 195 nt1.19□□□□□ -2.22
SHE1P38200 PIK1YNL267W 3201 nt1.19□□□□□ -2.22
SHE1P38200 NOC3YLR002C 1992 nt1.19□□□□□ -2.22
SHE1P38200 ZIP2YGL249W 2115 nt1.18□□□□□ -2.22
SHE1P38200 YMR242W-AYMR242W-A 90 nt1.18□□□□□ -2.22
SHE1P38200 YPR016W-AYPR016W-A 261 nt1.18□□□□□ -2.22
SHE1P38200 ENV11YGR071C 2583 nt1.18□□□□□ -2.22
SHE1P38200 APL2YKL135C 2181 nt1.17□□□□□ -2.22
SHE1P38200 CSN9YDR179C 489 nt1.17□□□□□ -2.22
SHE1P38200 YDR426CYDR426C 378 nt1.17□□□□□ -2.22
SHE1P38200 RPS20YHL015W 366 nt1.17□□□□□ -2.22
SHE1P38200 YHL046W-AYHL046W-A 327 nt1.17□□□□□ -2.22
SHE1P38200 YML007C-AYML007C-A 111 nt1.17□□□□□ -2.22
SHE1P38200 INP2YMR163C 2118 nt1.17□□□□□ -2.22
SHE1P38200 YOR199WYOR199W 330 nt1.17□□□□□ -2.22
SHE1P38200 YPR197CYPR197C 564 nt1.17□□□□□ -2.22
SHE1P38200 KIP1YBL063W 3336 nt1.17□□□□□ -2.22
SHE1P38200 VPS54YDR027C 2670 nt1.16□□□□□ -2.22
SHE1P38200 SCW11YGL028C 1629 nt1.16□□□□□ -2.22
SHE1P38200 MAD1YGL086W 2250 nt1.16□□□□□ -2.22
SHE1P38200 tR(ACG)Q2tR(ACG)Q2 74 nt1.16□□□□□ -2.22
SHE1P38200 VPS55YJR044C 423 nt1.16□□□□□ -2.22
SHE1P38200 snR14snR14 160 nt1.16□□□□□ -2.22
SHE1P38200 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
SHE1P38200 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
SHE1P38200 BUD3YCL014W 4911 nt1.15□□□□□ -2.22
SHE1P38200 NUP192YJL039C 5052 nt1.15□□□□□ -2.23
SHE1P38200 KAP122YGL016W 3246 nt1.15□□□□□ -2.23
SHE1P38200 ATP6Q0085 780 nt1.15□□□□□ -2.23
SHE1P38200 YJL015CYJL015C 285 nt1.15□□□□□ -2.23
SHE1P38200 YPR002C-AYPR002C-A 198 nt1.15□□□□□ -2.23
SHE1P38200 PBY1YBR094W 2262 nt1.14□□□□□ -2.23
SHE1P38200 YLL054CYLL054C 2532 nt1.14□□□□□ -2.23
SHE1P38200 NPC2YDL046W 522 nt1.14□□□□□ -2.23
SHE1P38200 YOL160WYOL160W 342 nt1.14□□□□□ -2.23
SHE1P38200 RPL33BYOR234C 324 nt1.14□□□□□ -2.23
SHE1P38200 SEC21YNL287W 2808 nt1.13□□□□□ -2.23
SHE1P38200 MDS3YGL197W 4464 nt1.13□□□□□ -2.23
SHE1P38200 YIL020C-AYIL020C-A 339 nt1.13□□□□□ -2.23
SHE1P38200 PCC1YKR095W-A 267 nt1.13□□□□□ -2.23
SHE1P38200 RPL38YLR325C 237 nt1.13□□□□□ -2.23
SHE1P38200 YOR108C-AYOR108C-A 210 nt1.13□□□□□ -2.23
SHE1P38200 AZF1YOR113W 2745 nt1.13□□□□□ -2.23
SHE1P38200 RIM20YOR275C 1986 nt1.12□□□□□ -2.23
SHE1P38200 RPL35AYDL191W 363 nt1.12□□□□□ -2.23
SHE1P38200 YDL211CYDL211C 1119 nt1.12□□□□□ -2.23
SHE1P38200 NUP188YML103C 4968 nt1.12□□□□□ -2.23
SHE1P38200 EST2YLR318W 2655 nt1.12□□□□□ -2.23
SHE1P38200 tH(GUG)E1tH(GUG)E1 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)E2tH(GUG)E2 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)G1tH(GUG)G1 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)G2tH(GUG)G2 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)HtH(GUG)H 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)KtH(GUG)K 72 nt1.11□□□□□ -2.23
SHE1P38200 tH(GUG)MtH(GUG)M 72 nt1.11□□□□□ -2.23
SHE1P38200 MPT5YGL178W 2580 nt1.1□□□□□ -2.23
SHE1P38200 SLI15YBR156C 2097 nt1.09□□□□□ -2.23
SHE1P38200 YAR029WYAR029W 225 nt1.09□□□□□ -2.23
SHE1P38200 HTB2YBL002W 396 nt1.09□□□□□ -2.23
SHE1P38200 YAF9YNL107W 681 nt1.09□□□□□ -2.23
SHE1P38200 YPL038W-AYPL038W-A 192 nt1.09□□□□□ -2.23
SHE1P38200 COG4YPR105C 2586 nt1.09□□□□□ -2.24
SHE1P38200 NUT1YGL151W 3399 nt1.09□□□□□ -2.24
SHE1P38200 AIM44YPL158C 2277 nt1.09□□□□□ -2.24
SHE1P38200 TRM732YMR259C 4263 nt1.09□□□□□ -2.24
SHE1P38200 LCD1YDR499W 2244 nt1.08□□□□□ -2.24
SHE1P38200 SPT21YMR179W 2277 nt1.08□□□□□ -2.24
SHE1P38200 LAA1YJL207C 6045 nt1.08□□□□□ -2.24
SHE1P38200 MAM33YIL070C 801 nt1.08□□□□□ -2.24
SHE1P38200 YBL008W-AYBL008W-A 240 nt1.08□□□□□ -2.24
SHE1P38200 YMR290W-AYMR290W-A 348 nt1.08□□□□□ -2.24
SHE1P38200 YSY6YBR162W-A 198 nt1.08□□□□□ -2.24
SHE1P38200 PIP2YOR363C 2991 nt1.08□□□□□ -2.24
SHE1P38200 RAD34YDR314C 2079 nt1.08□□□□□ -2.24
SHE1P38200 FIG4YNL325C 2640 nt1.07□□□□□ -2.24
SHE1P38200 CDC36YDL165W 576 nt1.07□□□□□ -2.24
SHE1P38200 YDR048CYDR048C 315 nt1.07□□□□□ -2.24
SHE1P38200 YHR007C-AYHR007C-A 216 nt1.07□□□□□ -2.24
SHE1P38200 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
SHE1P38200 PKH2YOL100W 3246 nt1.06□□□□□ -2.24
SHE1P38200 RSM22YKL155C 1887 nt1.05□□□□□ -2.24
SHE1P38200 YDL240C-AYDL240C-A 138 nt1.05□□□□□ -2.24
SHE1P38200 YLL020CYLL020C 306 nt1.05□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms