Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 RPL35AYDL191W 363 nt1.61□□□□□ -2.15
SEF1P34228 YDR182W-AYDR182W-A 204 nt1.61□□□□□ -2.15
SEF1P34228 PAU2YEL049W 363 nt1.61□□□□□ -2.15
SEF1P34228 MAM33YIL070C 801 nt1.61□□□□□ -2.15
SEF1P34228 YOR231C-AYOR231C-A 201 nt1.61□□□□□ -2.15
SEF1P34228 SPO24YPR036W-A 204 nt1.61□□□□□ -2.15
SEF1P34228 EMC5YIL027C 426 nt1.6□□□□□ -2.15
SEF1P34228 RPB10YOR210W 213 nt1.6□□□□□ -2.15
SEF1P34228 YPR002C-AYPR002C-A 198 nt1.6□□□□□ -2.15
SEF1P34228 BPH1YCR032W 6504 nt1.6□□□□□ -2.15
SEF1P34228 SAS3YBL052C 2496 nt1.6□□□□□ -2.15
SEF1P34228 YER181CYER181C 324 nt1.59□□□□□ -2.15
SEF1P34228 snR72snR72 98 nt1.58□□□□□ -2.16
SEF1P34228 YFL032WYFL032W 321 nt1.58□□□□□ -2.16
SEF1P34228 YMR242W-AYMR242W-A 90 nt1.58□□□□□ -2.16
SEF1P34228 YOL160WYOL160W 342 nt1.58□□□□□ -2.16
SEF1P34228 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
SEF1P34228 YDR426CYDR426C 378 nt1.57□□□□□ -2.16
SEF1P34228 YJL022WYJL022W 309 nt1.57□□□□□ -2.16
SEF1P34228 PCC1YKR095W-A 267 nt1.57□□□□□ -2.16
SEF1P34228 HTB2YBL002W 396 nt1.57□□□□□ -2.16
SEF1P34228 HUG1YML058W-A 207 nt1.57□□□□□ -2.16
SEF1P34228 YML099W-AYML099W-A 330 nt1.57□□□□□ -2.16
SEF1P34228 YPR010C-AYPR010C-A 219 nt1.57□□□□□ -2.16
SEF1P34228 SBE22YHR103W 2559 nt1.57□□□□□ -2.16
SEF1P34228 RTP1YMR185W 2946 nt1.57□□□□□ -2.16
SEF1P34228 KAP122YGL016W 3246 nt1.57□□□□□ -2.16
SEF1P34228 YCS4YLR272C 3531 nt1.56□□□□□ -2.16
SEF1P34228 YDR183C-AYDR183C-A 258 nt1.56□□□□□ -2.16
SEF1P34228 YIL115W-AYIL115W-A 372 nt1.56□□□□□ -2.16
SEF1P34228 TAR1YLR154W-C 375 nt1.56□□□□□ -2.16
SEF1P34228 YMR031W-AYMR031W-A 327 nt1.56□□□□□ -2.16
SEF1P34228 snR36snR36 182 nt1.56□□□□□ -2.16
SEF1P34228 NIP100YPL174C 2607 nt1.55□□□□□ -2.16
SEF1P34228 ZIP2YGL249W 2115 nt1.55□□□□□ -2.16
SEF1P34228 NUT1YGL151W 3399 nt1.55□□□□□ -2.16
SEF1P34228 ALK1YGL021W 2283 nt1.55□□□□□ -2.16
SEF1P34228 NPC2YDL046W 522 nt1.55□□□□□ -2.16
SEF1P34228 YJL135WYJL135W 318 nt1.55□□□□□ -2.16
SEF1P34228 COF1YLL050C 432 nt1.55□□□□□ -2.16
SEF1P34228 YMR175W-AYMR175W-A 195 nt1.55□□□□□ -2.16
SEF1P34228 COA6YMR244C-A 315 nt1.55□□□□□ -2.16
SEF1P34228 BST1YFL025C 3090 nt1.54□□□□□ -2.16
SEF1P34228 snR65snR65 100 nt1.54□□□□□ -2.16
SEF1P34228 YFL063WYFL063W 456 nt1.54□□□□□ -2.16
SEF1P34228 VPS55YJR044C 423 nt1.54□□□□□ -2.16
SEF1P34228 YOR108C-AYOR108C-A 210 nt1.54□□□□□ -2.16
SEF1P34228 STE5YDR103W 2754 nt1.54□□□□□ -2.16
SEF1P34228 AI5_ALPHAQ0070 1893 nt1.54□□□□□ -2.16
SEF1P34228 UFD2YDL190C 2886 nt1.53□□□□□ -2.16
SEF1P34228 YDR169C-AYDR169C-A 150 nt1.53□□□□□ -2.16
SEF1P34228 STF2YGR008C 255 nt1.53□□□□□ -2.16
SEF1P34228 CFT1YDR301W 4074 nt1.53□□□□□ -2.17
SEF1P34228 NCA2YPR155C 1851 nt1.52□□□□□ -2.17
SEF1P34228 RPL39YJL189W 156 nt1.52□□□□□ -2.17
SEF1P34228 SDH2YLL041C 801 nt1.52□□□□□ -2.17
SEF1P34228 NOC3YLR002C 1992 nt1.52□□□□□ -2.17
SEF1P34228 MAD1YGL086W 2250 nt1.51□□□□□ -2.17
SEF1P34228 YMR290W-AYMR290W-A 348 nt1.51□□□□□ -2.17
SEF1P34228 YBR174CYBR174C 315 nt1.51□□□□□ -2.17
SEF1P34228 TRM732YMR259C 4263 nt1.51□□□□□ -2.17
SEF1P34228 RAD50YNL250W 3939 nt1.51□□□□□ -2.17
SEF1P34228 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
SEF1P34228 SXM1YDR395W 2835 nt1.5□□□□□ -2.17
SEF1P34228 YAR029WYAR029W 225 nt1.5□□□□□ -2.17
SEF1P34228 RAD34YDR314C 2079 nt1.5□□□□□ -2.17
SEF1P34228 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
SEF1P34228 BRR2YER172C 6492 nt1.49□□□□□ -2.17
SEF1P34228 SMC4YLR086W 4257 nt1.49□□□□□ -2.17
SEF1P34228 YGL217CYGL217C 342 nt1.49□□□□□ -2.17
SEF1P34228 YLR140WYLR140W 327 nt1.49□□□□□ -2.17
SEF1P34228 YOR376WYOR376W 369 nt1.49□□□□□ -2.17
SEF1P34228 SPC98YNL126W 2541 nt1.49□□□□□ -2.17
SEF1P34228 PIK1YNL267W 3201 nt1.48□□□□□ -2.17
SEF1P34228 YDR048CYDR048C 315 nt1.48□□□□□ -2.17
SEF1P34228 CDC31YOR257W 486 nt1.48□□□□□ -2.17
SEF1P34228 SLX4YLR135W 2247 nt1.48□□□□□ -2.17
SEF1P34228 SEC5YDR166C 2916 nt1.48□□□□□ -2.17
SEF1P34228 VPS54YDR027C 2670 nt1.48□□□□□ -2.17
SEF1P34228 PMD1YER132C 5262 nt1.48□□□□□ -2.17
SEF1P34228 SCW11YGL028C 1629 nt1.47□□□□□ -2.17
SEF1P34228 HTL1YCR020W-B 237 nt1.46□□□□□ -2.18
SEF1P34228 SSK2YNR031C 4740 nt1.46□□□□□ -2.18
SEF1P34228 POL5YEL055C 3069 nt1.46□□□□□ -2.18
SEF1P34228 YCR022CYCR022C 345 nt1.45□□□□□ -2.18
SEF1P34228 OST1YJL002C 1431 nt1.45□□□□□ -2.18
SEF1P34228 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
SEF1P34228 ALY2YJL084C 3141 nt1.44□□□□□ -2.18
SEF1P34228 EST2YLR318W 2655 nt1.44□□□□□ -2.18
SEF1P34228 CHS1YNL192W 3396 nt1.44□□□□□ -2.18
SEF1P34228 SLI15YBR156C 2097 nt1.44□□□□□ -2.18
SEF1P34228 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
SEF1P34228 MPT5YGL178W 2580 nt1.43□□□□□ -2.18
SEF1P34228 YIR044CYIR044C 186 nt1.43□□□□□ -2.18
SEF1P34228 YOR161W-BYOR161W-B 261 nt1.43□□□□□ -2.18
SEF1P34228 YPR063CYPR063C 423 nt1.43□□□□□ -2.18
SEF1P34228 COG4YPR105C 2586 nt1.42□□□□□ -2.18
SEF1P34228 ALG13YGL047W 609 nt1.42□□□□□ -2.18
SEF1P34228 YIL102CYIL102C 306 nt1.42□□□□□ -2.18
SEF1P34228 snR14snR14 160 nt1.42□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms