Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 BSC3YLR465C 309 nt-0.35□□□□□ -2.47
TY1B-PR3P0C2J1 YNL050CYNL050C 813 nt-0.35□□□□□ -2.47
TY1B-PR3P0C2J1 PET20YPL159C 762 nt-0.35□□□□□ -2.47
TY1B-PR3P0C2J1 ORC3YLL004W 1851 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 YMR158C-AYMR158C-A 138 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 YOL118CYOL118C 309 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 ATP20YPR020W 348 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 YPR099CYPR099C 357 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 YBR184WYBR184W 1572 nt-0.36□□□□□ -2.47
TY1B-PR3P0C2J1 SOV1YMR066W 2697 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 RPS10BYMR230W 318 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 OLI1Q0130 231 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 MAM33YIL070C 801 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 YJR011CYJR011C 786 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 YPL044CYPL044C 549 nt-0.37□□□□□ -2.47
TY1B-PR3P0C2J1 MMS21YEL019C 804 nt-0.38□□□□□ -2.47
TY1B-PR3P0C2J1 RSM18YER050C 417 nt-0.38□□□□□ -2.47
TY1B-PR3P0C2J1 RPL29YFR032C-A 180 nt-0.38□□□□□ -2.47
TY1B-PR3P0C2J1 ERV15YBR210W 429 nt-0.38□□□□□ -2.47
TY1B-PR3P0C2J1 RAD61YDR014W 1944 nt-0.39□□□□□ -2.47
TY1B-PR3P0C2J1 PFS1YHR185C 714 nt-0.39□□□□□ -2.47
TY1B-PR3P0C2J1 YPR170W-AYPR170W-A 186 nt-0.39□□□□□ -2.47
TY1B-PR3P0C2J1 COX5BYIL111W 456 nt-0.4□□□□□ -2.47
TY1B-PR3P0C2J1 YLR271WYLR271W 825 nt-0.4□□□□□ -2.47
TY1B-PR3P0C2J1 CDC33YOL139C 642 nt-0.4□□□□□ -2.47
TY1B-PR3P0C2J1 VPS63YLR261C 327 nt-0.41□□□□□ -2.47
TY1B-PR3P0C2J1 SUS1YBR111W-A 291 nt-0.42□□□□□ -2.48
TY1B-PR3P0C2J1 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
TY1B-PR3P0C2J1 YDR008CYDR008C 351 nt-0.42□□□□□ -2.48
TY1B-PR3P0C2J1 TDA2YER071C 381 nt-0.42□□□□□ -2.48
TY1B-PR3P0C2J1 snR128snR128 126 nt-0.42□□□□□ -2.48
TY1B-PR3P0C2J1 YLL032CYLL032C 2478 nt-0.43□□□□□ -2.48
TY1B-PR3P0C2J1 SEC10YLR166C 2616 nt-0.43□□□□□ -2.48
TY1B-PR3P0C2J1 snR79snR79 84 nt-0.43□□□□□ -2.48
TY1B-PR3P0C2J1 YMR153C-AYMR153C-A 336 nt-0.43□□□□□ -2.48
TY1B-PR3P0C2J1 ASE1YOR058C 2658 nt-0.43□□□□□ -2.48
TY1B-PR3P0C2J1 YDR371C-AYDR371C-A 105 nt-0.44□□□□□ -2.48
TY1B-PR3P0C2J1 YIR030W-AYIR030W-A 384 nt-0.44□□□□□ -2.48
TY1B-PR3P0C2J1 NIP1YMR309C 2439 nt-0.44□□□□□ -2.48
TY1B-PR3P0C2J1 RUB1YDR139C 234 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 YDR210WYDR210W 228 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 YJR079WYJR079W 330 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 YJR141WYJR141W 1044 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 GSP1YLR293C 660 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 YPL185WYPL185W 396 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 YPL197CYPL197C 414 nt-0.45□□□□□ -2.48
TY1B-PR3P0C2J1 NPC2YDL046W 522 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 HTB1YDR224C 396 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 YER038W-AYER038W-A 381 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 YLR146W-AYLR146W-A 189 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 YKU70YMR284W 1809 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 15S_rRNA15S_rRNA 1649 nt-0.46□□□□□ -2.48
TY1B-PR3P0C2J1 IRC2YDR112W 309 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 YEL073CYEL073C 324 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 EMC4YGL231C 573 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 DFG10YIL049W 762 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 ECM9YKR004C 1134 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 YOL160WYOL160W 342 nt-0.47□□□□□ -2.48
TY1B-PR3P0C2J1 YGL204CYGL204C 306 nt-0.47□□□□□ -2.49
TY1B-PR3P0C2J1 LSO2YGR169C-A 279 nt-0.47□□□□□ -2.49
TY1B-PR3P0C2J1 RPS26AYGL189C 360 nt-0.48□□□□□ -2.49
TY1B-PR3P0C2J1 YBR121C-AYBR121C-A 159 nt-0.48□□□□□ -2.49
TY1B-PR3P0C2J1 YDR344CYDR344C 444 nt-0.49□□□□□ -2.49
TY1B-PR3P0C2J1 YPR160W-AYPR160W-A 81 nt-0.49□□□□□ -2.49
TY1B-PR3P0C2J1 YBR206WYBR206W 324 nt-0.49□□□□□ -2.49
TY1B-PR3P0C2J1 DAD1YDR016C 285 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 LIN1YHR156C 1023 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 snR59snR59 78 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 YAL067W-AYAL067W-A 228 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 YMR141W-AYMR141W-A 225 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 YMR290W-AYMR290W-A 348 nt-0.5□□□□□ -2.49
TY1B-PR3P0C2J1 PAN3YKL025C 2040 nt-0.51□□□□□ -2.49
TY1B-PR3P0C2J1 YLR399W-AYLR399W-A 105 nt-0.51□□□□□ -2.49
TY1B-PR3P0C2J1 TFB6YOR352W 1032 nt-0.51□□□□□ -2.49
TY1B-PR3P0C2J1 YJR140W-AYJR140W-A 150 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 RFX1YLR176C 2436 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 ZIP2YGL249W 2115 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 YJL135WYJL135W 318 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 YNR077CYNR077C 255 nt-0.52□□□□□ -2.49
TY1B-PR3P0C2J1 snR57snR57 88 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 NFU1YKL040C 771 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 YBL008W-AYBL008W-A 240 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 YNL146WYNL146W 303 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 UBS1YBR165W 834 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 RSM23YGL129C 1353 nt-0.53□□□□□ -2.49
TY1B-PR3P0C2J1 OST4YDL232W 111 nt-0.54□□□□□ -2.5
TY1B-PR3P0C2J1 RMD6YEL072W 696 nt-0.54□□□□□ -2.5
TY1B-PR3P0C2J1 SEM1YDR363W-A 270 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 RPS7BYNL096C 573 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 YCR024C-BYCR024C-B 267 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 YFR057WYFR057W 456 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 POP6YGR030C 477 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 tT(UGU)Q1tT(UGU)Q1 76 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 YJL120WYJL120W 324 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 YKL023C-AYKL023C-A 228 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 MRPL31YKL138C 396 nt-0.55□□□□□ -2.5
TY1B-PR3P0C2J1 YOL106WYOL106W 354 nt-0.55□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 47.8 ms