Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
TY1B-PR2P0C2J0 SEC10YLR166C 2616 nt-0.42□□□□□ -2.48
TY1B-PR2P0C2J0 YJR011CYJR011C 786 nt-0.42□□□□□ -2.48
TY1B-PR2P0C2J0 YDR210WYDR210W 228 nt-0.43□□□□□ -2.48
TY1B-PR2P0C2J0 HTB2YBL002W 396 nt-0.43□□□□□ -2.48
TY1B-PR2P0C2J0 RUF20RUF20 443 nt-0.43□□□□□ -2.48
TY1B-PR2P0C2J0 YNL171CYNL171C 369 nt-0.43□□□□□ -2.48
TY1B-PR2P0C2J0 RPL29YFR032C-A 180 nt-0.44□□□□□ -2.48
TY1B-PR2P0C2J0 YIR030W-AYIR030W-A 384 nt-0.44□□□□□ -2.48
TY1B-PR2P0C2J0 BSC3YLR465C 309 nt-0.44□□□□□ -2.48
TY1B-PR2P0C2J0 RPS10BYMR230W 318 nt-0.44□□□□□ -2.48
TY1B-PR2P0C2J0 YOL118CYOL118C 309 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 SOV1YMR066W 2697 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 RSM18YER050C 417 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 TDA2YER071C 381 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 PET20YPL159C 762 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 ATP20YPR020W 348 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 ORC3YLL004W 1851 nt-0.45□□□□□ -2.48
TY1B-PR2P0C2J0 BI4Q0120 1917 nt-0.46□□□□□ -2.48
TY1B-PR2P0C2J0 PFS1YHR185C 714 nt-0.46□□□□□ -2.48
TY1B-PR2P0C2J0 COX5BYIL111W 456 nt-0.46□□□□□ -2.48
TY1B-PR2P0C2J0 YJR141WYJR141W 1044 nt-0.46□□□□□ -2.48
TY1B-PR2P0C2J0 YPR099CYPR099C 357 nt-0.46□□□□□ -2.48
TY1B-PR2P0C2J0 OLI1Q0130 231 nt-0.47□□□□□ -2.48
TY1B-PR2P0C2J0 MAM33YIL070C 801 nt-0.47□□□□□ -2.48
TY1B-PR2P0C2J0 YMR158C-AYMR158C-A 138 nt-0.47□□□□□ -2.48
TY1B-PR2P0C2J0 MMS21YEL019C 804 nt-0.47□□□□□ -2.49
TY1B-PR2P0C2J0 YPL044CYPL044C 549 nt-0.47□□□□□ -2.49
TY1B-PR2P0C2J0 YBR064WYBR064W 429 nt-0.47□□□□□ -2.49
TY1B-PR2P0C2J0 NPC2YDL046W 522 nt-0.48□□□□□ -2.49
TY1B-PR2P0C2J0 YPL197CYPL197C 414 nt-0.48□□□□□ -2.49
TY1B-PR2P0C2J0 YLR271WYLR271W 825 nt-0.49□□□□□ -2.49
TY1B-PR2P0C2J0 YPL185WYPL185W 396 nt-0.49□□□□□ -2.49
TY1B-PR2P0C2J0 VPS63YLR261C 327 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 GSP1YLR293C 660 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 snR128snR128 126 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TY1B-PR2P0C2J0 YDR008CYDR008C 351 nt-0.51□□□□□ -2.49
TY1B-PR2P0C2J0 YEL073CYEL073C 324 nt-0.51□□□□□ -2.49
TY1B-PR2P0C2J0 YNR077CYNR077C 255 nt-0.51□□□□□ -2.49
TY1B-PR2P0C2J0 CDC33YOL139C 642 nt-0.51□□□□□ -2.49
TY1B-PR2P0C2J0 YDR371C-AYDR371C-A 105 nt-0.52□□□□□ -2.49
TY1B-PR2P0C2J0 YER038W-AYER038W-A 381 nt-0.52□□□□□ -2.49
TY1B-PR2P0C2J0 YLL032CYLL032C 2478 nt-0.52□□□□□ -2.49
TY1B-PR2P0C2J0 EMC4YGL231C 573 nt-0.53□□□□□ -2.49
TY1B-PR2P0C2J0 HTB1YDR224C 396 nt-0.54□□□□□ -2.5
TY1B-PR2P0C2J0 snR33snR33 183 nt-0.54□□□□□ -2.5
TY1B-PR2P0C2J0 ASE1YOR058C 2658 nt-0.54□□□□□ -2.5
TY1B-PR2P0C2J0 snR79snR79 84 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 ECM9YKR004C 1134 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 YLR146W-AYLR146W-A 189 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 RPS7BYNL096C 573 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 SUS1YBR111W-A 291 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 YBR206WYBR206W 324 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 RFX1YLR176C 2436 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 NIP1YMR309C 2439 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 RUB1YDR139C 234 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 YAL067W-AYAL067W-A 228 nt-0.55□□□□□ -2.5
TY1B-PR2P0C2J0 YKU70YMR284W 1809 nt-0.56□□□□□ -2.5
TY1B-PR2P0C2J0 RPS26AYGL189C 360 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 YJR079WYJR079W 330 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 YMR153C-AYMR153C-A 336 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 YGL204CYGL204C 306 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 LSO2YGR169C-A 279 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 YOL160WYOL160W 342 nt-0.57□□□□□ -2.5
TY1B-PR2P0C2J0 DFG10YIL049W 762 nt-0.58□□□□□ -2.5
TY1B-PR2P0C2J0 TFB6YOR352W 1032 nt-0.58□□□□□ -2.5
TY1B-PR2P0C2J0 YPR160W-AYPR160W-A 81 nt-0.58□□□□□ -2.5
TY1B-PR2P0C2J0 YCR038W-AYCR038W-A 126 nt-0.59□□□□□ -2.5
TY1B-PR2P0C2J0 DAD1YDR016C 285 nt-0.59□□□□□ -2.5
TY1B-PR2P0C2J0 IRC2YDR112W 309 nt-0.59□□□□□ -2.5
TY1B-PR2P0C2J0 YMR290W-AYMR290W-A 348 nt-0.6□□□□□ -2.5
TY1B-PR2P0C2J0 15S_rRNA15S_rRNA 1649 nt-0.6□□□□□ -2.51
TY1B-PR2P0C2J0 PAN3YKL025C 2040 nt-0.6□□□□□ -2.51
TY1B-PR2P0C2J0 YDR344CYDR344C 444 nt-0.6□□□□□ -2.51
TY1B-PR2P0C2J0 YLR399W-AYLR399W-A 105 nt-0.6□□□□□ -2.51
TY1B-PR2P0C2J0 YJR140W-AYJR140W-A 150 nt-0.61□□□□□ -2.51
TY1B-PR2P0C2J0 OST4YDL232W 111 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 YBR223W-AYBR223W-A 120 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 snR59snR59 78 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 YJL120WYJL120W 324 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 YMR141W-AYMR141W-A 225 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 UBS1YBR165W 834 nt-0.62□□□□□ -2.51
TY1B-PR2P0C2J0 ZIP2YGL249W 2115 nt-0.63□□□□□ -2.51
TY1B-PR2P0C2J0 POP6YGR030C 477 nt-0.64□□□□□ -2.51
TY1B-PR2P0C2J0 RSM23YGL129C 1353 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 snR57snR57 88 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 YJL135WYJL135W 318 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 NFU1YKL040C 771 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 MRPL31YKL138C 396 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 YBR121C-AYBR121C-A 159 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 GIM5YML094W 492 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 YNL146WYNL146W 303 nt-0.65□□□□□ -2.51
TY1B-PR2P0C2J0 MCM10YIL150C 1716 nt-0.66□□□□□ -2.51
TY1B-PR2P0C2J0 snR44snR44 211 nt-0.66□□□□□ -2.52
TY1B-PR2P0C2J0 LIN1YHR156C 1023 nt-0.67□□□□□ -2.52
TY1B-PR2P0C2J0 YPL205CYPL205C 345 nt-0.67□□□□□ -2.52
TY1B-PR2P0C2J0 YFR057WYFR057W 456 nt-0.68□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 98.7 ms