Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB2O43679 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB2O43679 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
LDB2O43679 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.15■□□□□ 0.82
LDB2O43679 GPX1P1-201ENST00000388829 606 ntBASIC20.15■□□□□ 0.82
LDB2O43679 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LDB2O43679 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB2O43679 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.15■□□□□ 0.82
LDB2O43679 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.15■□□□□ 0.82
LDB2O43679 BX119927.1-201ENST00000636596 1552 ntBASIC20.15■□□□□ 0.82
LDB2O43679 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LDB2O43679 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
LDB2O43679 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB2O43679 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.14■□□□□ 0.82
LDB2O43679 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.14■□□□□ 0.82
LDB2O43679 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.14■□□□□ 0.82
LDB2O43679 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB2O43679 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
LDB2O43679 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LDB2O43679 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.14■□□□□ 0.81
LDB2O43679 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.14■□□□□ 0.81
LDB2O43679 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.14■□□□□ 0.81
LDB2O43679 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.14■□□□□ 0.81
LDB2O43679 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.14■□□□□ 0.81
LDB2O43679 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB2O43679 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB2O43679 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB2O43679 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LDB2O43679 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LDB2O43679 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.13■□□□□ 0.81
LDB2O43679 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LDB2O43679 HLA-L-209ENST00000420110 1011 ntBASIC20.13■□□□□ 0.81
LDB2O43679 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB2O43679 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LDB2O43679 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB2O43679 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB2O43679 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB2O43679 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LDB2O43679 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB2O43679 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB2O43679 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.12■□□□□ 0.81
LDB2O43679 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.12■□□□□ 0.81
LDB2O43679 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LDB2O43679 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB2O43679 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB2O43679 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB2O43679 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LDB2O43679 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB2O43679 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB2O43679 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LDB2O43679 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB2O43679 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.11■□□□□ 0.81
LDB2O43679 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LDB2O43679 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB2O43679 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB2O43679 AC092118.2-201ENST00000613495 667 ntBASIC20.11■□□□□ 0.81
LDB2O43679 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB2O43679 KRT8P17-201ENST00000453110 1448 ntBASIC20.1■□□□□ 0.81
LDB2O43679 AL691432.2-201ENST00000607222 2038 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms