Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YDR008CYDR008C 351 nt0.08□□□□□ -2.4
TY1B-HO13535 CUP1-1YHR053C 186 nt0.08□□□□□ -2.4
TY1B-HO13535 CUP1-2YHR055C 186 nt0.08□□□□□ -2.4
TY1B-HO13535 YLR146W-AYLR146W-A 189 nt0.08□□□□□ -2.4
TY1B-HO13535 NNF2YGR089W 2811 nt0.08□□□□□ -2.4
TY1B-HO13535 NOP9YJL010C 2001 nt0.07□□□□□ -2.4
TY1B-HO13535 RPL26BYGR034W 384 nt0.07□□□□□ -2.4
TY1B-HO13535 BIG1YHR101C 1008 nt0.07□□□□□ -2.4
TY1B-HO13535 YMR153C-AYMR153C-A 336 nt0.07□□□□□ -2.4
TY1B-HO13535 VIK1YPL253C 1944 nt0.07□□□□□ -2.4
TY1B-HO13535 PAN3YKL025C 2040 nt0.07□□□□□ -2.4
TY1B-HO13535 RPL22BYFL034C-A 369 nt0.06□□□□□ -2.4
TY1B-HO13535 LRP1YHR081W 555 nt0.06□□□□□ -2.4
TY1B-HO13535 TDA2YER071C 381 nt0.06□□□□□ -2.4
TY1B-HO13535 YHR054CYHR054C 1065 nt0.06□□□□□ -2.4
TY1B-HO13535 YHR139C-AYHR139C-A 312 nt0.05□□□□□ -2.4
TY1B-HO13535 YOR248WYOR248W 303 nt0.05□□□□□ -2.4
TY1B-HO13535 YLL032CYLL032C 2478 nt0.05□□□□□ -2.4
TY1B-HO13535 YIL134C-AYIL134C-A 204 nt0.04□□□□□ -2.4
TY1B-HO13535 YIR021W-AYIR021W-A 213 nt0.04□□□□□ -2.4
TY1B-HO13535 YLR271WYLR271W 825 nt0.04□□□□□ -2.4
TY1B-HO13535 COX7YMR256C 183 nt0.04□□□□□ -2.4
TY1B-HO13535 VAM3YOR106W 852 nt0.04□□□□□ -2.4
TY1B-HO13535 AFR1YDR085C 1863 nt0.04□□□□□ -2.4
TY1B-HO13535 PMP1YCR024C-A 123 nt0.04□□□□□ -2.4
TY1B-HO13535 YLR252WYLR252W 306 nt0.04□□□□□ -2.4
TY1B-HO13535 YPR153WYPR153W 423 nt0.04□□□□□ -2.4
TY1B-HO13535 YKL111CYKL111C 336 nt0.03□□□□□ -2.4
TY1B-HO13535 YNL146C-AYNL146C-A 195 nt0.03□□□□□ -2.4
TY1B-HO13535 VMA21YGR105W 234 nt0.02□□□□□ -2.41
TY1B-HO13535 YPR096CYPR096C 303 nt0.02□□□□□ -2.41
TY1B-HO13535 LOA1YPR139C 903 nt0.02□□□□□ -2.41
TY1B-HO13535 TIM10YHR005C-A 282 nt0.01□□□□□ -2.41
TY1B-HO13535 PRP21YJL203W 843 nt0.01□□□□□ -2.41
TY1B-HO13535 RPB10YOR210W 213 nt0.01□□□□□ -2.41
TY1B-HO13535 YBL100W-BYBL100W-B 5313 nt0.01□□□□□ -2.41
TY1B-HO13535 YLR217WYLR217W 324 nt0.01□□□□□ -2.41
TY1B-HO13535 YOL160WYOL160W 342 nt0.01□□□□□ -2.41
TY1B-HO13535 TFB6YOR352W 1032 nt0.01□□□□□ -2.41
TY1B-HO13535 YHL042WYHL042W 453 nt0□□□□□ -2.41
TY1B-HO13535 RFX1YLR176C 2436 nt0□□□□□ -2.41
TY1B-HO13535 YNL050CYNL050C 813 nt0□□□□□ -2.41
TY1B-HO13535 YOR364WYOR364W 369 nt0□□□□□ -2.41
TY1B-HO13535 AFB1YLR040C 675 nt-0.01□□□□□ -2.41
TY1B-HO13535 YBR064WYBR064W 429 nt-0.01□□□□□ -2.41
TY1B-HO13535 YPR170CYPR170C 336 nt-0.01□□□□□ -2.41
TY1B-HO13535 SBH1YER087C-B 249 nt-0.01□□□□□ -2.41
TY1B-HO13535 RPL26AYLR344W 384 nt-0.01□□□□□ -2.41
TY1B-HO13535 YJR079WYJR079W 330 nt-0.02□□□□□ -2.41
TY1B-HO13535 YBR071WYBR071W 636 nt-0.02□□□□□ -2.41
TY1B-HO13535 PRP42YDR235W 1635 nt-0.03□□□□□ -2.41
TY1B-HO13535 snR5snR5 204 nt-0.03□□□□□ -2.41
TY1B-HO13535 YGR115CYGR115C 780 nt-0.03□□□□□ -2.41
TY1B-HO13535 MRPL31YKL138C 396 nt-0.03□□□□□ -2.41
TY1B-HO13535 RCN2YOR220W 798 nt-0.03□□□□□ -2.41
TY1B-HO13535 INP2YMR163C 2118 nt-0.03□□□□□ -2.41
TY1B-HO13535 ZIP2YGL249W 2115 nt-0.03□□□□□ -2.41
TY1B-HO13535 NPC2YDL046W 522 nt-0.04□□□□□ -2.42
TY1B-HO13535 QCR7YDR529C 384 nt-0.04□□□□□ -2.42
TY1B-HO13535 ILM1YJR118C 612 nt-0.04□□□□□ -2.42
TY1B-HO13535 YMR013C-AYMR013C-A 150 nt-0.04□□□□□ -2.42
TY1B-HO13535 YMR290W-AYMR290W-A 348 nt-0.04□□□□□ -2.42
TY1B-HO13535 RPL35AYDL191W 363 nt-0.04□□□□□ -2.42
TY1B-HO13535 CUL3YGR003W 2235 nt-0.05□□□□□ -2.42
TY1B-HO13535 HAL9YOL089C 3093 nt-0.05□□□□□ -2.42
TY1B-HO13535 SSS1YDR086C 243 nt-0.05□□□□□ -2.42
TY1B-HO13535 COX12YLR038C 252 nt-0.05□□□□□ -2.42
TY1B-HO13535 YBL062WYBL062W 381 nt-0.05□□□□□ -2.42
TY1B-HO13535 CDC33YOL139C 642 nt-0.05□□□□□ -2.42
TY1B-HO13535 YOR186C-AYOR186C-A 210 nt-0.05□□□□□ -2.42
TY1B-HO13535 LEE1YPL054W 906 nt-0.05□□□□□ -2.42
TY1B-HO13535 FYV10YIL097W 1551 nt-0.05□□□□□ -2.42
TY1B-HO13535 YOR108C-AYOR108C-A 210 nt-0.06□□□□□ -2.42
TY1B-HO13535 YPL044CYPL044C 549 nt-0.06□□□□□ -2.42
TY1B-HO13535 YBR076C-AYBR076C-A 267 nt-0.06□□□□□ -2.42
TY1B-HO13535 YCL002CYCL002C 792 nt-0.06□□□□□ -2.42
TY1B-HO13535 BUD26YDR241W 288 nt-0.06□□□□□ -2.42
TY1B-HO13535 YER138W-AYER138W-A 105 nt-0.06□□□□□ -2.42
TY1B-HO13535 CWC23YGL128C 852 nt-0.06□□□□□ -2.42
TY1B-HO13535 SDS22YKL193C 1017 nt-0.06□□□□□ -2.42
TY1B-HO13535 YBL107W-AYBL107W-A 105 nt-0.06□□□□□ -2.42
TY1B-HO13535 YJL135WYJL135W 318 nt-0.07□□□□□ -2.42
TY1B-HO13535 YPT6YLR262C 648 nt-0.07□□□□□ -2.42
TY1B-HO13535 CSM4YPL200W 471 nt-0.07□□□□□ -2.42
TY1B-HO13535 snR190snR190 190 nt-0.07□□□□□ -2.42
TY1B-HO13535 YDR029WYDR029W 315 nt-0.08□□□□□ -2.42
TY1B-HO13535 OLI1Q0130 231 nt-0.08□□□□□ -2.42
TY1B-HO13535 COX5BYIL111W 456 nt-0.08□□□□□ -2.42
TY1B-HO13535 YJL127W-AYJL127W-A 117 nt-0.08□□□□□ -2.42
TY1B-HO13535 BSC3YLR465C 309 nt-0.08□□□□□ -2.42
TY1B-HO13535 YPL185WYPL185W 396 nt-0.08□□□□□ -2.42
TY1B-HO13535 YPL060C-AYPL060C-A 3315 nt-0.09□□□□□ -2.42
TY1B-HO13535 YNL150WYNL150W 408 nt-0.09□□□□□ -2.42
TY1B-HO13535 YDR220CYDR220C 294 nt-0.1□□□□□ -2.43
TY1B-HO13535 UBS1YBR165W 834 nt-0.1□□□□□ -2.43
TY1B-HO13535 YGL015CYGL015C 393 nt-0.11□□□□□ -2.43
TY1B-HO13535 YBL008W-AYBL008W-A 240 nt-0.11□□□□□ -2.43
TY1B-HO13535 YLR412C-AYLR412C-A 207 nt-0.11□□□□□ -2.43
TY1B-HO13535 NIP100YPL174C 2607 nt-0.11□□□□□ -2.43
TY1B-HO13535 RCO1YMR075W 2055 nt-0.11□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms