Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YNL211C	YNL211C	261 nt		2.78	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	AFI1	YOR129C	2682 nt		2.78	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	APL5	YPL195W	2799 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	OST4	YDL232W	111 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YGL041C-B	YGL041C-B	183 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	tL(UAA)Q	tL(UAA)Q	85 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	HOS4	YIL112W	3252 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PUT3	YKL015W	2940 nt		2.77	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	CRM1	YGR218W	3255 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YDR186C	YDR186C	2634 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	INP51	YIL002C	2841 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	EMP24	YGL200C	612 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	CMC4	YMR194C-B	222 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	CYR1	YJL005W	6081 nt		2.76	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	SPO22	YIL073C	2928 nt		2.75	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PBY1	YBR094W	2262 nt		2.75	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	CDC31	YOR257W	486 nt		2.75	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PIP2	YOR363C	2991 nt		2.75	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	SWR1	YDR334W	4545 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	VPS16	YPL045W	2397 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	CTF4	YPR135W	2784 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	VMR1	YHL035C	4779 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YEF3	YLR249W	3135 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	NOC3	YLR002C	1992 nt		2.74	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	IRR1	YIL026C	3453 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	NUP100	YKL068W	2880 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	SNC1	YAL030W	354 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PAU8	YAL068C	363 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PAU18	YLL064C	363 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	KTI11	YBL071W-A	249 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PAU6	YNR076W	363 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	PAU20	YOL161C	363 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	RPL33A	YPL143W	324 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YBR277C	YBR277C	402 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YCL046W	YCL046W	324 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	SKP2	YNL311C	2292 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YME2	YMR302C	2553 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	BNR1	YIL159W	4128 nt		2.73	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	YBR206W	YBR206W	324 nt		2.72	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	RSE1	YML049C	4086 nt		2.72	□□□□□ -1.97
TY4B-P	A0A0B7P3V8	TIM9	YEL020W-A	264 nt		2.71	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SLM1	YIL105C	2061 nt		2.71	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YPR097W	YPR097W	3222 nt		2.71	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	MSB2	YGR014W	3921 nt		2.71	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SET2	YJL168C	2202 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YGR067C	YGR067C	2415 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	ACB1	YGR037C	264 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YIL174W	YIL174W	228 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YJL222W-A	YJL222W-A	228 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YOR394C-A	YOR394C-A	168 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YFR016C	YFR016C	3702 nt		2.7	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	RAD34	YDR314C	2079 nt		2.69	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YIL134C-A	YIL134C-A	204 nt		2.69	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	ZRG8	YER033C	3231 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	INP53	YOR109W	3324 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SBE22	YHR103W	2559 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	RPL31A	YDL075W	342 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	MBB1	YJL199C	327 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YMR242W-A	YMR242W-A	90 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	YPL216W	YPL216W	3309 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	RRP6	YOR001W	2202 nt		2.68	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SOM1	YEL059C-A	225 nt		2.67	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	TCB2	YNL087W	3537 nt		2.67	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	ZIP2	YGL249W	2115 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SRO77	YBL106C	3033 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	SLD3	YGL113W	2007 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	CBF2	YGR140W	2871 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	RPS30B	YOR182C	192 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	NAM7	YMR080C	2916 nt		2.66	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	MGM1	YOR211C	2646 nt		2.65	□□□□□ -1.98
TY4B-P	A0A0B7P3V8	CAT2	YML042W	2013 nt		2.65	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	RPS22A	YJL190C	393 nt		2.65	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	ESL2	YKR096W	3588 nt		2.65	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YOR019W	YOR019W	2193 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	MLH1	YMR167W	2310 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YOR108C-A	YOR108C-A	210 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	NEW1	YPL226W	3591 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	SAS3	YBL052C	2496 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	DNF1	YER166W	4716 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	TOF1	YNL273W	3717 nt		2.64	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	VTC3	YPL019C	2508 nt		2.63	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YDL118W	YDL118W	381 nt		2.63	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	MAD1	YGL086W	2250 nt		2.63	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	SPF1	YEL031W	3648 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	SGS1	YMR190C	4344 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	CSF1	YLR087C	8877 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	TRA1	YHR099W	11235 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YCR038W-A	YCR038W-A	126 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	tS(GCU)Q1	tS(GCU)Q1	86 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YLL066W-B	YLL066W-B	171 nt		2.62	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	AXL1	YPR122W	3627 nt		2.61	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	ZIP1	YDR285W	2628 nt		2.61	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	BCK1	YJL095W	4437 nt		2.6	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	YCR102W-A	YCR102W-A	198 nt		2.6	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	CDC53	YDL132W	2448 nt		2.6	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	DGR2	YKL121W	2559 nt		2.59	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	CHS6	YJL099W	2241 nt		2.59	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	PRP5	YBR237W	2550 nt		2.59	□□□□□ -1.99
TY4B-P	A0A0B7P3V8	SIR4	YDR227W	4077 nt		2.59	□□□□□ -2
TY4B-P	A0A0B7P3V8	NOP14	YDL148C	2433 nt		2.59	□□□□□ -2

Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms