Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
EXT1Q16394 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.68■□□□□ 0.58
EXT1Q16394 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXT1Q16394 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXT1Q16394 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.68■□□□□ 0.58
EXT1Q16394 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXT1Q16394 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXT1Q16394 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EXT1Q16394 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.67■□□□□ 0.58
EXT1Q16394 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EXT1Q16394 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.67■□□□□ 0.58
EXT1Q16394 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.67■□□□□ 0.58
EXT1Q16394 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.67■□□□□ 0.58
EXT1Q16394 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.67■□□□□ 0.58
EXT1Q16394 C1QBPP2-201ENST00000528754 825 ntBASIC18.67■□□□□ 0.58
EXT1Q16394 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.67■□□□□ 0.58
EXT1Q16394 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.67■□□□□ 0.58
EXT1Q16394 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.67■□□□□ 0.58
EXT1Q16394 AL359736.2-201ENST00000621992 437 ntBASIC18.67■□□□□ 0.58
EXT1Q16394 FAM197Y4-202ENST00000622692 608 ntBASIC18.67■□□□□ 0.58
EXT1Q16394 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.67■□□□□ 0.58
EXT1Q16394 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXT1Q16394 AL121603.2-201ENST00000557373 2117 ntBASIC18.67■□□□□ 0.58
EXT1Q16394 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EXT1Q16394 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.66■□□□□ 0.58
EXT1Q16394 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXT1Q16394 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXT1Q16394 AC007225.1-201ENST00000566331 1836 ntBASIC18.66■□□□□ 0.58
EXT1Q16394 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 UBE2SP1-201ENST00000450587 669 ntBASIC18.66■□□□□ 0.58
EXT1Q16394 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.66■□□□□ 0.58
EXT1Q16394 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EXT1Q16394 RPPH1-201ENST00000516869 333 ntBASIC18.66■□□□□ 0.58
EXT1Q16394 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.66■□□□□ 0.58
EXT1Q16394 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.66■□□□□ 0.58
EXT1Q16394 AC233263.1-201ENST00000578059 224 ntBASIC18.66■□□□□ 0.58
EXT1Q16394 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXT1Q16394 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EXT1Q16394 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXT1Q16394 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
EXT1Q16394 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EXT1Q16394 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EXT1Q16394 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.65■□□□□ 0.58
EXT1Q16394 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
EXT1Q16394 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.65■□□□□ 0.58
EXT1Q16394 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EXT1Q16394 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.65■□□□□ 0.58
EXT1Q16394 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.65■□□□□ 0.58
EXT1Q16394 MTDHP1-201ENST00000605323 784 ntBASIC18.65■□□□□ 0.58
EXT1Q16394 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EXT1Q16394 KRT8P20-201ENST00000423953 1409 ntBASIC18.65■□□□□ 0.58
EXT1Q16394 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.65■□□□□ 0.58
EXT1Q16394 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EXT1Q16394 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EXT1Q16394 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.64■□□□□ 0.57
EXT1Q16394 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
EXT1Q16394 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.64■□□□□ 0.57
EXT1Q16394 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EXT1Q16394 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.64■□□□□ 0.57
EXT1Q16394 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.64■□□□□ 0.57
EXT1Q16394 AC093827.2-201ENST00000512654 315 ntBASIC18.64■□□□□ 0.57
EXT1Q16394 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.64■□□□□ 0.57
EXT1Q16394 AL031963.3-201ENST00000606441 850 ntBASIC18.64■□□□□ 0.57
EXT1Q16394 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EXT1Q16394 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
EXT1Q16394 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXT1Q16394 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms