Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 FMP23YBR047W 528 nt1.91□□□□□ -2.1
PDH1Q12428 YCR102W-AYCR102W-A 198 nt1.9□□□□□ -2.11
PDH1Q12428 YHL041WYHL041W 450 nt1.9□□□□□ -2.11
PDH1Q12428 YHR073W-AYHR073W-A 177 nt1.9□□□□□ -2.11
PDH1Q12428 RPL42BYHR141C 321 nt1.9□□□□□ -2.11
PDH1Q12428 TAR1YLR154W-C 375 nt1.9□□□□□ -2.11
PDH1Q12428 RPL42AYNL162W 321 nt1.9□□□□□ -2.11
PDH1Q12428 UBP2YOR124C 3819 nt1.9□□□□□ -2.11
PDH1Q12428 FKS1YLR342W 5631 nt1.9□□□□□ -2.11
PDH1Q12428 SFB2YNL049C 2631 nt1.9□□□□□ -2.11
PDH1Q12428 YCR043CYCR043C 384 nt1.89□□□□□ -2.11
PDH1Q12428 YDL118WYDL118W 381 nt1.89□□□□□ -2.11
PDH1Q12428 OSH6YKR003W 1347 nt1.89□□□□□ -2.11
PDH1Q12428 ZRG8YER033C 3231 nt1.89□□□□□ -2.11
PDH1Q12428 SEC63YOR254C 1992 nt1.89□□□□□ -2.11
PDH1Q12428 SAC3YDR159W 3906 nt1.88□□□□□ -2.11
PDH1Q12428 YFL063WYFL063W 456 nt1.88□□□□□ -2.11
PDH1Q12428 YMR272W-BYMR272W-B 108 nt1.88□□□□□ -2.11
PDH1Q12428 SAR1YPL218W 573 nt1.88□□□□□ -2.11
PDH1Q12428 VPS34YLR240W 2628 nt1.88□□□□□ -2.11
PDH1Q12428 YJR039WYJR039W 3366 nt1.88□□□□□ -2.11
PDH1Q12428 UBR2YLR024C 5619 nt1.88□□□□□ -2.11
PDH1Q12428 NUP192YJL039C 5052 nt1.88□□□□□ -2.11
PDH1Q12428 YHR071C-AYHR071C-A 321 nt1.87□□□□□ -2.11
PDH1Q12428 YKL183C-AYKL183C-A 213 nt1.87□□□□□ -2.11
PDH1Q12428 EFR3YMR212C 2349 nt1.87□□□□□ -2.11
PDH1Q12428 NOP14YDL148C 2433 nt1.87□□□□□ -2.11
PDH1Q12428 YLR146W-AYLR146W-A 189 nt1.86□□□□□ -2.11
PDH1Q12428 YAR029WYAR029W 225 nt1.86□□□□□ -2.11
PDH1Q12428 RPL38YLR325C 237 nt1.86□□□□□ -2.11
PDH1Q12428 HTB2YBL002W 396 nt1.86□□□□□ -2.11
PDH1Q12428 YBL012CYBL012C 402 nt1.86□□□□□ -2.11
PDH1Q12428 YNL114CYNL114C 372 nt1.86□□□□□ -2.11
PDH1Q12428 RIM20YOR275C 1986 nt1.86□□□□□ -2.11
PDH1Q12428 YNL144CYNL144C 2223 nt1.86□□□□□ -2.11
PDH1Q12428 IRR1YIL026C 3453 nt1.86□□□□□ -2.11
PDH1Q12428 CTF4YPR135W 2784 nt1.86□□□□□ -2.11
PDH1Q12428 YHR214C-BYHR214C-B 5382 nt1.85□□□□□ -2.11
PDH1Q12428 NOP53YPL146C 1368 nt1.85□□□□□ -2.11
PDH1Q12428 SEY1YOR165W 2331 nt1.85□□□□□ -2.11
PDH1Q12428 YCR022CYCR022C 345 nt1.85□□□□□ -2.11
PDH1Q12428 NUT2YPR168W 474 nt1.85□□□□□ -2.11
PDH1Q12428 TRM3YDL112W 4311 nt1.85□□□□□ -2.11
PDH1Q12428 PXA2YKL188C 2562 nt1.84□□□□□ -2.12
PDH1Q12428 DCP2YNL118C 2913 nt1.84□□□□□ -2.12
PDH1Q12428 GCN2YDR283C 4980 nt1.83□□□□□ -2.12
PDH1Q12428 SWI6YLR182W 2412 nt1.83□□□□□ -2.12
PDH1Q12428 NEO1YIL048W 3456 nt1.83□□□□□ -2.12
PDH1Q12428 HDA3YPR179C 1968 nt1.83□□□□□ -2.12
PDH1Q12428 PAU3YCR104W 375 nt1.83□□□□□ -2.12
PDH1Q12428 UPS1YLR193C 528 nt1.83□□□□□ -2.12
PDH1Q12428 YMR290W-AYMR290W-A 348 nt1.83□□□□□ -2.12
PDH1Q12428 YPR010C-AYPR010C-A 219 nt1.83□□□□□ -2.12
PDH1Q12428 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
PDH1Q12428 PKH3YDR466W 2697 nt1.83□□□□□ -2.12
PDH1Q12428 YDR048CYDR048C 315 nt1.82□□□□□ -2.12
PDH1Q12428 YOP1YPR028W 543 nt1.82□□□□□ -2.12
PDH1Q12428 YOR343W-BYOR343W-B 5313 nt1.82□□□□□ -2.12
PDH1Q12428 SWI5YDR146C 2130 nt1.82□□□□□ -2.12
PDH1Q12428 AGC1YPR021C 2709 nt1.81□□□□□ -2.12
PDH1Q12428 TFC8YPL007C 1767 nt1.81□□□□□ -2.12
PDH1Q12428 HTL1YCR020W-B 237 nt1.81□□□□□ -2.12
PDH1Q12428 CYC7YEL039C 342 nt1.81□□□□□ -2.12
PDH1Q12428 YER088C-AYER088C-A 324 nt1.81□□□□□ -2.12
PDH1Q12428 YGL149WYGL149W 306 nt1.81□□□□□ -2.12
PDH1Q12428 PAU18YLL064C 363 nt1.81□□□□□ -2.12
PDH1Q12428 YML007C-AYML007C-A 111 nt1.81□□□□□ -2.12
PDH1Q12428 PAU6YNR076W 363 nt1.81□□□□□ -2.12
PDH1Q12428 MSH6YDR097C 3729 nt1.8□□□□□ -2.12
PDH1Q12428 TBS1YBR150C 3285 nt1.8□□□□□ -2.12
PDH1Q12428 MCM22YJR135C 720 nt1.8□□□□□ -2.12
PDH1Q12428 PCC1YKR095W-A 267 nt1.8□□□□□ -2.12
PDH1Q12428 YMR141W-AYMR141W-A 225 nt1.8□□□□□ -2.12
PDH1Q12428 YOR282WYOR282W 321 nt1.8□□□□□ -2.12
PDH1Q12428 NPC2YDL046W 522 nt1.79□□□□□ -2.12
PDH1Q12428 YGR250CYGR250C 2346 nt1.79□□□□□ -2.12
PDH1Q12428 SBE22YHR103W 2559 nt1.79□□□□□ -2.12
PDH1Q12428 IRE1YHR079C 3348 nt1.78□□□□□ -2.12
PDH1Q12428 MUK1YPL070W 1839 nt1.78□□□□□ -2.12
PDH1Q12428 snR51snR51 107 nt1.78□□□□□ -2.12
PDH1Q12428 YCL046WYCL046W 324 nt1.78□□□□□ -2.12
PDH1Q12428 LYS14YDR034C 2373 nt1.77□□□□□ -2.13
PDH1Q12428 CTR9YOL145C 3234 nt1.77□□□□□ -2.13
PDH1Q12428 YDR426CYDR426C 378 nt1.77□□□□□ -2.13
PDH1Q12428 HIR3YJR140C 4947 nt1.77□□□□□ -2.13
PDH1Q12428 DBP6YNR038W 1890 nt1.77□□□□□ -2.13
PDH1Q12428 RFX1YLR176C 2436 nt1.77□□□□□ -2.13
PDH1Q12428 SLY1YDR189W 2001 nt1.76□□□□□ -2.13
PDH1Q12428 ADR1YDR216W 3972 nt1.76□□□□□ -2.13
PDH1Q12428 YIL102CYIL102C 306 nt1.76□□□□□ -2.13
PDH1Q12428 LHS1YKL073W 2646 nt1.76□□□□□ -2.13
PDH1Q12428 MYO2YOR326W 4725 nt1.75□□□□□ -2.13
PDH1Q12428 ZRG17YNR039C 1818 nt1.75□□□□□ -2.13
PDH1Q12428 MSC6YOR354C 2079 nt1.75□□□□□ -2.13
PDH1Q12428 DNF3YMR162C 4971 nt1.75□□□□□ -2.13
PDH1Q12428 MDM20YOL076W 2391 nt1.75□□□□□ -2.13
PDH1Q12428 TRX1YLR043C 312 nt1.75□□□□□ -2.13
PDH1Q12428 YPR002C-AYPR002C-A 198 nt1.75□□□□□ -2.13
PDH1Q12428 CFT1YDR301W 4074 nt1.74□□□□□ -2.13
PDH1Q12428 YHR210CYHR210C 1026 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms