Protein–RNA interactions for Protein: Q07688

YPD1, Phosphorelay intermediate protein YPD1, yeastyeast

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPD1Q07688 AIM44YPL158C 2277 nt0.39□□□□□ -2.35
YPD1Q07688 YEL018C-AYEL018C-A 534 nt0.39□□□□□ -2.35
YPD1Q07688 YNL150WYNL150W 408 nt0.39□□□□□ -2.35
YPD1Q07688 snR84snR84 550 nt0.38□□□□□ -2.35
YPD1Q07688 ALG13YGL047W 609 nt0.38□□□□□ -2.35
YPD1Q07688 HIT1YJR055W 495 nt0.38□□□□□ -2.35
YPD1Q07688 YBR121C-AYBR121C-A 159 nt0.38□□□□□ -2.35
YPD1Q07688 SPO23YBR250W 1572 nt0.37□□□□□ -2.35
YPD1Q07688 BUD26YDR241W 288 nt0.37□□□□□ -2.35
YPD1Q07688 YGR042WYGR042W 816 nt0.37□□□□□ -2.35
YPD1Q07688 LIN1YHR156C 1023 nt0.37□□□□□ -2.35
YPD1Q07688 YMR013C-AYMR013C-A 150 nt0.37□□□□□ -2.35
YPD1Q07688 YOR218CYOR218C 420 nt0.37□□□□□ -2.35
YPD1Q07688 YPR099CYPR099C 357 nt0.37□□□□□ -2.35
YPD1Q07688 PAN3YKL025C 2040 nt0.37□□□□□ -2.35
YPD1Q07688 BFR2YDR299W 1605 nt0.36□□□□□ -2.35
YPD1Q07688 DBP6YNR038W 1890 nt0.36□□□□□ -2.35
YPD1Q07688 YDR008CYDR008C 351 nt0.36□□□□□ -2.35
YPD1Q07688 YPL197CYPL197C 414 nt0.36□□□□□ -2.35
YPD1Q07688 YPR170CYPR170C 336 nt0.36□□□□□ -2.35
YPD1Q07688 PXA2YKL188C 2562 nt0.36□□□□□ -2.35
YPD1Q07688 YHR139C-AYHR139C-A 312 nt0.35□□□□□ -2.35
YPD1Q07688 RPC10YHR143W-A 213 nt0.35□□□□□ -2.35
YPD1Q07688 YIL059CYIL059C 366 nt0.35□□□□□ -2.35
YPD1Q07688 YLR217WYLR217W 324 nt0.35□□□□□ -2.35
YPD1Q07688 YPR153WYPR153W 423 nt0.35□□□□□ -2.35
YPD1Q07688 ALY2YJL084C 3141 nt0.35□□□□□ -2.35
YPD1Q07688 UTP20YBL004W 7482 nt0.34□□□□□ -2.35
YPD1Q07688 LCD1YDR499W 2244 nt0.34□□□□□ -2.35
YPD1Q07688 LYS14YDR034C 2373 nt0.34□□□□□ -2.35
YPD1Q07688 SLY1YDR189W 2001 nt0.34□□□□□ -2.36
YPD1Q07688 CWC23YGL128C 852 nt0.34□□□□□ -2.36
YPD1Q07688 ENV11YGR071C 2583 nt0.34□□□□□ -2.36
YPD1Q07688 GEA2YEL022W 4380 nt0.34□□□□□ -2.36
YPD1Q07688 YDR114CYDR114C 303 nt0.33□□□□□ -2.36
YPD1Q07688 YDR220CYDR220C 294 nt0.33□□□□□ -2.36
YPD1Q07688 TIM10YHR005C-A 282 nt0.33□□□□□ -2.36
YPD1Q07688 YHR063W-AYHR063W-A 336 nt0.33□□□□□ -2.36
YPD1Q07688 YKL111CYKL111C 336 nt0.33□□□□□ -2.36
YPD1Q07688 YNL146C-AYNL146C-A 195 nt0.33□□□□□ -2.36
YPD1Q07688 WAR1YML076C 2835 nt0.33□□□□□ -2.36
YPD1Q07688 MET32YDR253C 576 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)BtF(GAA)B 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)FtF(GAA)F 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)GtF(GAA)G 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)H1tF(GAA)H1 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)H2tF(GAA)H2 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)MtF(GAA)M 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)P1tF(GAA)P1 73 nt0.32□□□□□ -2.36
YPD1Q07688 tF(GAA)P2tF(GAA)P2 73 nt0.32□□□□□ -2.36
YPD1Q07688 SLX9YGR081C 633 nt0.32□□□□□ -2.36
YPD1Q07688 MMS4YBR098W 2076 nt0.32□□□□□ -2.36
YPD1Q07688 PAN2YGL094C 3348 nt0.32□□□□□ -2.36
YPD1Q07688 UPS1YLR193C 528 nt0.31□□□□□ -2.36
YPD1Q07688 ULP2YIL031W 3105 nt0.3□□□□□ -2.36
YPD1Q07688 YKL145W-AYKL145W-A 93 nt0.3□□□□□ -2.36
YPD1Q07688 ABF2YMR072W 552 nt0.3□□□□□ -2.36
YPD1Q07688 YMR153C-AYMR153C-A 336 nt0.3□□□□□ -2.36
YPD1Q07688 YSP1YHR155W 3687 nt0.3□□□□□ -2.36
YPD1Q07688 RRT1YBL048W 312 nt0.29□□□□□ -2.36
YPD1Q07688 CHS6YJL099W 2241 nt0.29□□□□□ -2.36
YPD1Q07688 BI4Q0120 1917 nt0.28□□□□□ -2.36
YPD1Q07688 ISD11YER048W-A 285 nt0.28□□□□□ -2.36
YPD1Q07688 YLR271WYLR271W 825 nt0.28□□□□□ -2.36
YPD1Q07688 FMP27YLR454W 7887 nt0.28□□□□□ -2.37
YPD1Q07688 RSM27YGR215W 333 nt0.27□□□□□ -2.37
YPD1Q07688 GMC2YLR445W 567 nt0.27□□□□□ -2.37
YPD1Q07688 YPR096CYPR096C 303 nt0.27□□□□□ -2.37
YPD1Q07688 UBX4YMR067C 1251 nt0.26□□□□□ -2.37
YPD1Q07688 YBR071WYBR071W 636 nt0.26□□□□□ -2.37
YPD1Q07688 YLL032CYLL032C 2478 nt0.26□□□□□ -2.37
YPD1Q07688 SLI15YBR156C 2097 nt0.25□□□□□ -2.37
YPD1Q07688 snR5snR5 204 nt0.25□□□□□ -2.37
YPD1Q07688 YER138W-AYER138W-A 105 nt0.25□□□□□ -2.37
YPD1Q07688 YER188C-AYER188C-A 300 nt0.25□□□□□ -2.37
YPD1Q07688 YBL107W-AYBL107W-A 105 nt0.25□□□□□ -2.37
YPD1Q07688 YFR057WYFR057W 456 nt0.24□□□□□ -2.37
YPD1Q07688 MRPL31YKL138C 396 nt0.24□□□□□ -2.37
YPD1Q07688 SPC2YML055W 537 nt0.24□□□□□ -2.37
YPD1Q07688 YGL015CYGL015C 393 nt0.23□□□□□ -2.37
YPD1Q07688 SPO13YHR014W 876 nt0.23□□□□□ -2.37
YPD1Q07688 RPS24BYIL069C 408 nt0.23□□□□□ -2.37
YPD1Q07688 YJR079WYJR079W 330 nt0.23□□□□□ -2.37
YPD1Q07688 YCK3YER123W 1575 nt0.23□□□□□ -2.37
YPD1Q07688 AI1Q0050 2505 nt0.22□□□□□ -2.37
YPD1Q07688 WIP1YDR374W-A 270 nt0.22□□□□□ -2.37
YPD1Q07688 YIL134C-AYIL134C-A 204 nt0.22□□□□□ -2.37
YPD1Q07688 VAM3YOR106W 852 nt0.22□□□□□ -2.37
YPD1Q07688 CSM4YPL200W 471 nt0.22□□□□□ -2.37
YPD1Q07688 NPR2YEL062W 1848 nt0.22□□□□□ -2.37
YPD1Q07688 NOP9YJL010C 2001 nt0.21□□□□□ -2.38
YPD1Q07688 TRS65YGR166W 1683 nt0.21□□□□□ -2.38
YPD1Q07688 PMP1YCR024C-A 123 nt0.21□□□□□ -2.38
YPD1Q07688 NPC2YDL046W 522 nt0.21□□□□□ -2.38
YPD1Q07688 RPL26BYGR034W 384 nt0.21□□□□□ -2.38
YPD1Q07688 SPO11YHL022C 1197 nt0.21□□□□□ -2.38
YPD1Q07688 RPL32YBL092W 393 nt0.21□□□□□ -2.38
YPD1Q07688 YER076W-AYER076W-A 348 nt0.2□□□□□ -2.38
YPD1Q07688 YGR228WYGR228W 345 nt0.2□□□□□ -2.38
YPD1Q07688 YIR021W-AYIR021W-A 213 nt0.2□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms