Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YNL114CYNL114C 372 nt2.54□□□□□ -2
SSL1Q04673 RPH1YER169W 2391 nt2.54□□□□□ -2
SSL1Q04673 HOS4YIL112W 3252 nt2.54□□□□□ -2
SSL1Q04673 SGM1YJR134C 2124 nt2.54□□□□□ -2
SSL1Q04673 INP51YIL002C 2841 nt2.54□□□□□ -2
SSL1Q04673 ORC2YBR060C 1863 nt2.54□□□□□ -2
SSL1Q04673 ZRG8YER033C 3231 nt2.53□□□□□ -2
SSL1Q04673 RPL42BYHR141C 321 nt2.53□□□□□ -2
SSL1Q04673 YLR140WYLR140W 327 nt2.53□□□□□ -2
SSL1Q04673 RPL42AYNL162W 321 nt2.53□□□□□ -2
SSL1Q04673 SPO22YIL073C 2928 nt2.53□□□□□ -2
SSL1Q04673 IRR1YIL026C 3453 nt2.53□□□□□ -2
SSL1Q04673 FKS3YMR306W 5358 nt2.52□□□□□ -2.01
SSL1Q04673 INA22YIR024C 651 nt2.52□□□□□ -2.01
SSL1Q04673 RPS29AYLR388W 171 nt2.52□□□□□ -2.01
SSL1Q04673 YMR194C-AYMR194C-A 225 nt2.52□□□□□ -2.01
SSL1Q04673 AMS1YGL156W 3252 nt2.52□□□□□ -2.01
SSL1Q04673 CDC53YDL132W 2448 nt2.52□□□□□ -2.01
SSL1Q04673 AI5_ALPHAQ0070 1893 nt2.52□□□□□ -2.01
SSL1Q04673 PRP39YML046W 1890 nt2.52□□□□□ -2.01
SSL1Q04673 STB4YMR019W 2850 nt2.51□□□□□ -2.01
SSL1Q04673 MRD1YPR112C 2664 nt2.51□□□□□ -2.01
SSL1Q04673 FAR11YNL127W 2862 nt2.51□□□□□ -2.01
SSL1Q04673 YHR032W-AYHR032W-A 180 nt2.51□□□□□ -2.01
SSL1Q04673 YBL083CYBL083C 426 nt2.51□□□□□ -2.01
SSL1Q04673 RPB10YOR210W 213 nt2.51□□□□□ -2.01
SSL1Q04673 VPS54YDR027C 2670 nt2.51□□□□□ -2.01
SSL1Q04673 PHO2YDL106C 1680 nt2.5□□□□□ -2.01
SSL1Q04673 SWR1YDR334W 4545 nt2.5□□□□□ -2.01
SSL1Q04673 SLM1YIL105C 2061 nt2.5□□□□□ -2.01
SSL1Q04673 YGR050CYGR050C 357 nt2.5□□□□□ -2.01
SSL1Q04673 YPR092WYPR092W 306 nt2.5□□□□□ -2.01
SSL1Q04673 YBR182C-AYBR182C-A 195 nt2.5□□□□□ -2.01
SSL1Q04673 SEC5YDR166C 2916 nt2.5□□□□□ -2.01
SSL1Q04673 CBF2YGR140W 2871 nt2.49□□□□□ -2.01
SSL1Q04673 RFX1YLR176C 2436 nt2.49□□□□□ -2.01
SSL1Q04673 SET2YJL168C 2202 nt2.49□□□□□ -2.01
SSL1Q04673 MGM1YOR211C 2646 nt2.49□□□□□ -2.01
SSL1Q04673 KRE33YNL132W 3171 nt2.49□□□□□ -2.01
SSL1Q04673 PTP3YER075C 2787 nt2.49□□□□□ -2.01
SSL1Q04673 TRS130YMR218C 3309 nt2.48□□□□□ -2.01
SSL1Q04673 YJL135WYJL135W 318 nt2.48□□□□□ -2.01
SSL1Q04673 YOR376WYOR376W 369 nt2.48□□□□□ -2.01
SSL1Q04673 YEF3YLR249W 3135 nt2.47□□□□□ -2.01
SSL1Q04673 SWI5YDR146C 2130 nt2.47□□□□□ -2.01
SSL1Q04673 NEW1YPL226W 3591 nt2.47□□□□□ -2.01
SSL1Q04673 PDR1YGL013C 3207 nt2.47□□□□□ -2.01
SSL1Q04673 YNL170WYNL170W 396 nt2.47□□□□□ -2.01
SSL1Q04673 SIR3YLR442C 2937 nt2.47□□□□□ -2.01
SSL1Q04673 YKU70YMR284W 1809 nt2.47□□□□□ -2.01
SSL1Q04673 EMP24YGL200C 612 nt2.46□□□□□ -2.02
SSL1Q04673 VTC3YPL019C 2508 nt2.46□□□□□ -2.02
SSL1Q04673 SRO77YBL106C 3033 nt2.46□□□□□ -2.02
SSL1Q04673 TUS1YLR425W 3924 nt2.46□□□□□ -2.02
SSL1Q04673 SWA2YDR320C 2007 nt2.46□□□□□ -2.02
SSL1Q04673 YOR218CYOR218C 420 nt2.45□□□□□ -2.02
SSL1Q04673 YBL005W-BYBL005W-B 5268 nt2.45□□□□□ -2.02
SSL1Q04673 YNL018CYNL018C 1839 nt2.45□□□□□ -2.02
SSL1Q04673 YCR043CYCR043C 384 nt2.44□□□□□ -2.02
SSL1Q04673 YHR073W-AYHR073W-A 177 nt2.44□□□□□ -2.02
SSL1Q04673 EDS1YBR033W 2760 nt2.44□□□□□ -2.02
SSL1Q04673 LYS14YDR034C 2373 nt2.43□□□□□ -2.02
SSL1Q04673 snR72snR72 98 nt2.43□□□□□ -2.02
SSL1Q04673 RPS27BYHR021C 249 nt2.43□□□□□ -2.02
SSL1Q04673 YIR030W-AYIR030W-A 384 nt2.43□□□□□ -2.02
SSL1Q04673 YOR055WYOR055W 435 nt2.43□□□□□ -2.02
SSL1Q04673 YHR071C-AYHR071C-A 321 nt2.42□□□□□ -2.02
SSL1Q04673 ARP8YOR141C 2646 nt2.42□□□□□ -2.02
SSL1Q04673 VMR1YHL035C 4779 nt2.41□□□□□ -2.02
SSL1Q04673 MPT5YGL178W 2580 nt2.41□□□□□ -2.02
SSL1Q04673 BNR1YIL159W 4128 nt2.41□□□□□ -2.02
SSL1Q04673 MRP10YDL045W-A 288 nt2.41□□□□□ -2.02
SSL1Q04673 SGF11YPL047W 300 nt2.41□□□□□ -2.02
SSL1Q04673 TOR1YJR066W 7413 nt2.41□□□□□ -2.02
SSL1Q04673 KIP1YBL063W 3336 nt2.4□□□□□ -2.02
SSL1Q04673 snR74snR74 88 nt2.4□□□□□ -2.03
SSL1Q04673 YNL097C-BYNL097C-B 123 nt2.4□□□□□ -2.03
SSL1Q04673 YOR394C-AYOR394C-A 168 nt2.4□□□□□ -2.03
SSL1Q04673 NIP100YPL174C 2607 nt2.4□□□□□ -2.03
SSL1Q04673 PDR11YIL013C 4236 nt2.4□□□□□ -2.03
SSL1Q04673 SMC6YLR383W 3345 nt2.4□□□□□ -2.03
SSL1Q04673 YFR016CYFR016C 3702 nt2.4□□□□□ -2.03
SSL1Q04673 YIL156W-BYIL156W-B 222 nt2.39□□□□□ -2.03
SSL1Q04673 PAU8YAL068C 363 nt2.39□□□□□ -2.03
SSL1Q04673 PAU18YLL064C 363 nt2.39□□□□□ -2.03
SSL1Q04673 PAU6YNR076W 363 nt2.39□□□□□ -2.03
SSL1Q04673 PAU20YOL161C 363 nt2.39□□□□□ -2.03
SSL1Q04673 snR46snR46 197 nt2.39□□□□□ -2.03
SSL1Q04673 TRA1YHR099W 11235 nt2.39□□□□□ -2.03
SSL1Q04673 TFC8YPL007C 1767 nt2.38□□□□□ -2.03
SSL1Q04673 SDH6YDR379C-A 240 nt2.38□□□□□ -2.03
SSL1Q04673 YGL217CYGL217C 342 nt2.38□□□□□ -2.03
SSL1Q04673 MCM10YIL150C 1716 nt2.38□□□□□ -2.03
SSL1Q04673 YBL012CYBL012C 402 nt2.38□□□□□ -2.03
SSL1Q04673 MSC6YOR354C 2079 nt2.38□□□□□ -2.03
SSL1Q04673 YCR102W-AYCR102W-A 198 nt2.37□□□□□ -2.03
SSL1Q04673 SRP14YDL092W 441 nt2.37□□□□□ -2.03
SSL1Q04673 ULI1YFR026C 510 nt2.37□□□□□ -2.03
SSL1Q04673 Q0143Q0143 153 nt2.37□□□□□ -2.03
SSL1Q04673 SIR4YDR227W 4077 nt2.37□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 46.2 ms