Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 PCF11YDR228C 1881 nt1.54□□□□□ -2.16
RPN9Q04062 SWI6YLR182W 2412 nt1.54□□□□□ -2.16
RPN9Q04062 RPL26AYLR344W 384 nt1.54□□□□□ -2.16
RPN9Q04062 RPL9BYNL067W 576 nt1.54□□□□□ -2.16
RPN9Q04062 SBE22YHR103W 2559 nt1.53□□□□□ -2.16
RPN9Q04062 YIL102CYIL102C 306 nt1.53□□□□□ -2.16
RPN9Q04062 NUP192YJL039C 5052 nt1.53□□□□□ -2.16
RPN9Q04062 YKL083WYKL083W 615 nt1.53□□□□□ -2.16
RPN9Q04062 YOR053WYOR053W 342 nt1.53□□□□□ -2.16
RPN9Q04062 HHT1YBR010W 411 nt1.53□□□□□ -2.16
RPN9Q04062 YOP1YPR028W 543 nt1.53□□□□□ -2.16
RPN9Q04062 SSK2YNR031C 4740 nt1.53□□□□□ -2.16
RPN9Q04062 ADR1YDR216W 3972 nt1.53□□□□□ -2.17
RPN9Q04062 YGR109W-BYGR109W-B 4644 nt1.52□□□□□ -2.17
RPN9Q04062 YAP6YDR259C 1152 nt1.52□□□□□ -2.17
RPN9Q04062 YHR138CYHR138C 345 nt1.52□□□□□ -2.17
RPN9Q04062 LYS14YDR034C 2373 nt1.52□□□□□ -2.17
RPN9Q04062 CHS1YNL192W 3396 nt1.52□□□□□ -2.17
RPN9Q04062 AIM9YER080W 1884 nt1.52□□□□□ -2.17
RPN9Q04062 SFB2YNL049C 2631 nt1.52□□□□□ -2.17
RPN9Q04062 YFL019CYFL019C 354 nt1.51□□□□□ -2.17
RPN9Q04062 YOR293C-AYOR293C-A 150 nt1.51□□□□□ -2.17
RPN9Q04062 PET127YOR017W 2403 nt1.51□□□□□ -2.17
RPN9Q04062 SPO23YBR250W 1572 nt1.51□□□□□ -2.17
RPN9Q04062 YBP1YBR216C 2025 nt1.5□□□□□ -2.17
RPN9Q04062 EFR3YMR212C 2349 nt1.5□□□□□ -2.17
RPN9Q04062 BST1YFL025C 3090 nt1.5□□□□□ -2.17
RPN9Q04062 YDR157WYDR157W 402 nt1.5□□□□□ -2.17
RPN9Q04062 RTR1YER139C 681 nt1.5□□□□□ -2.17
RPN9Q04062 YIL059CYIL059C 366 nt1.5□□□□□ -2.17
RPN9Q04062 ISF1YMR081C 1017 nt1.5□□□□□ -2.17
RPN9Q04062 YPL229WYPL229W 621 nt1.5□□□□□ -2.17
RPN9Q04062 SXM1YDR395W 2835 nt1.5□□□□□ -2.17
RPN9Q04062 MLH3YPL164C 2148 nt1.49□□□□□ -2.17
RPN9Q04062 YLR422WYLR422W 5799 nt1.49□□□□□ -2.17
RPN9Q04062 CYC7YEL039C 342 nt1.49□□□□□ -2.17
RPN9Q04062 PFD1YJL179W 330 nt1.49□□□□□ -2.17
RPN9Q04062 PMD1YER132C 5262 nt1.49□□□□□ -2.17
RPN9Q04062 MEC1YBR136W 7107 nt1.49□□□□□ -2.17
RPN9Q04062 ALK1YGL021W 2283 nt1.49□□□□□ -2.17
RPN9Q04062 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
RPN9Q04062 NCA2YPR155C 1851 nt1.48□□□□□ -2.17
RPN9Q04062 ANS1YHR126C 480 nt1.48□□□□□ -2.17
RPN9Q04062 YJL022WYJL022W 309 nt1.48□□□□□ -2.17
RPN9Q04062 BSC3YLR465C 309 nt1.48□□□□□ -2.17
RPN9Q04062 CDC31YOR257W 486 nt1.48□□□□□ -2.17
RPN9Q04062 KAP122YGL016W 3246 nt1.48□□□□□ -2.17
RPN9Q04062 SMC4YLR086W 4257 nt1.48□□□□□ -2.17
RPN9Q04062 PAU2YEL049W 363 nt1.47□□□□□ -2.17
RPN9Q04062 YGR174W-AYGR174W-A 87 nt1.47□□□□□ -2.17
RPN9Q04062 YHL037CYHL037C 402 nt1.47□□□□□ -2.17
RPN9Q04062 COF1YLL050C 432 nt1.47□□□□□ -2.17
RPN9Q04062 YML003WYML003W 873 nt1.47□□□□□ -2.17
RPN9Q04062 YMR141W-AYMR141W-A 225 nt1.47□□□□□ -2.17
RPN9Q04062 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
RPN9Q04062 SEC5YDR166C 2916 nt1.47□□□□□ -2.17
RPN9Q04062 RFX1YLR176C 2436 nt1.47□□□□□ -2.17
RPN9Q04062 YER137W-AYER137W-A 306 nt1.46□□□□□ -2.18
RPN9Q04062 EMC5YIL027C 426 nt1.46□□□□□ -2.18
RPN9Q04062 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
RPN9Q04062 SAC3YDR159W 3906 nt1.45□□□□□ -2.18
RPN9Q04062 CAT8YMR280C 4302 nt1.45□□□□□ -2.18
RPN9Q04062 YHL041WYHL041W 450 nt1.45□□□□□ -2.18
RPN9Q04062 HIT1YJR055W 495 nt1.45□□□□□ -2.18
RPN9Q04062 YAL068W-AYAL068W-A 255 nt1.45□□□□□ -2.18
RPN9Q04062 RAD50YNL250W 3939 nt1.45□□□□□ -2.18
RPN9Q04062 DGR2YKL121W 2559 nt1.45□□□□□ -2.18
RPN9Q04062 YLL032CYLL032C 2478 nt1.44□□□□□ -2.18
RPN9Q04062 VPS55YJR044C 423 nt1.44□□□□□ -2.18
RPN9Q04062 MRPL31YKL138C 396 nt1.44□□□□□ -2.18
RPN9Q04062 YLR140WYLR140W 327 nt1.44□□□□□ -2.18
RPN9Q04062 SLY1YDR189W 2001 nt1.44□□□□□ -2.18
RPN9Q04062 AI5_ALPHAQ0070 1893 nt1.43□□□□□ -2.18
RPN9Q04062 UPS1YLR193C 528 nt1.43□□□□□ -2.18
RPN9Q04062 MVP1YMR004W 1536 nt1.43□□□□□ -2.18
RPN9Q04062 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
RPN9Q04062 RPL40BYKR094C 387 nt1.42□□□□□ -2.18
RPN9Q04062 YOR376WYOR376W 369 nt1.42□□□□□ -2.18
RPN9Q04062 UFD2YDL190C 2886 nt1.42□□□□□ -2.18
RPN9Q04062 PIG1YLR273C 1947 nt1.42□□□□□ -2.18
RPN9Q04062 SAS3YBL052C 2496 nt1.42□□□□□ -2.18
RPN9Q04062 RPB10YOR210W 213 nt1.41□□□□□ -2.18
RPN9Q04062 EST2YLR318W 2655 nt1.4□□□□□ -2.19
RPN9Q04062 PAC1YOR269W 1485 nt1.4□□□□□ -2.19
RPN9Q04062 YDR118W-AYDR118W-A 117 nt1.4□□□□□ -2.19
RPN9Q04062 YGL217CYGL217C 342 nt1.4□□□□□ -2.19
RPN9Q04062 YJL015CYJL015C 285 nt1.4□□□□□ -2.19
RPN9Q04062 YOR121CYOR121C 306 nt1.4□□□□□ -2.19
RPN9Q04062 TIM18YOR297C 579 nt1.4□□□□□ -2.19
RPN9Q04062 NUT2YPR168W 474 nt1.4□□□□□ -2.19
RPN9Q04062 CDC25YLR310C 4770 nt1.4□□□□□ -2.19
RPN9Q04062 POL5YEL055C 3069 nt1.39□□□□□ -2.19
RPN9Q04062 MUK1YPL070W 1839 nt1.38□□□□□ -2.19
RPN9Q04062 YDR182W-AYDR182W-A 204 nt1.38□□□□□ -2.19
RPN9Q04062 IRC23YOR044W 474 nt1.38□□□□□ -2.19
RPN9Q04062 YPR170W-AYPR170W-A 186 nt1.38□□□□□ -2.19
RPN9Q04062 SLX4YLR135W 2247 nt1.38□□□□□ -2.19
RPN9Q04062 SDH2YLL041C 801 nt1.37□□□□□ -2.19
RPN9Q04062 snR51snR51 107 nt1.37□□□□□ -2.19
RPN9Q04062 SGO1YOR073W 1773 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms