Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YDR316W-BYDR316W-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YDR365W-BYDR365W-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YER138CYER138C 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YER160CYER160C 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YGR038C-BYGR038C-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YGR161C-DYGR161C-D 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YJR027WYJR027W 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YLR157C-BYLR157C-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YML039WYML039W 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YML045WYML045W 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YMR050CYMR050C 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YOL103W-BYOL103W-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YBR012W-BYBR012W-B 5271 nt2.64□□□□□ -1.99
NPL3Q01560 YOR142W-BYOR142W-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YPL257W-BYPL257W-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YPR158W-BYPR158W-B 5271 nt2.64□□□□□ -1.99
NPL3Q01560 NUP100YKL068W 2880 nt2.63□□□□□ -1.99
NPL3Q01560 TOP2YNL088W 4287 nt2.63□□□□□ -1.99
NPL3Q01560 YIL174WYIL174W 228 nt2.63□□□□□ -1.99
NPL3Q01560 YJL222W-AYJL222W-A 228 nt2.63□□□□□ -1.99
NPL3Q01560 YOR329W-AYOR329W-A 210 nt2.63□□□□□ -1.99
NPL3Q01560 YPR002C-AYPR002C-A 198 nt2.63□□□□□ -1.99
NPL3Q01560 YPR092WYPR092W 306 nt2.63□□□□□ -1.99
NPL3Q01560 PXA2YKL188C 2562 nt2.62□□□□□ -1.99
NPL3Q01560 YDR286CYDR286C 345 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)G1tW(CCA)G1 72 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)G2tW(CCA)G2 72 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)JtW(CCA)J 72 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)KtW(CCA)K 72 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)MtW(CCA)M 72 nt2.62□□□□□ -1.99
NPL3Q01560 tW(CCA)PtW(CCA)P 72 nt2.62□□□□□ -1.99
NPL3Q01560 YNL097C-BYNL097C-B 123 nt2.62□□□□□ -1.99
NPL3Q01560 LCL1YPL056C 306 nt2.62□□□□□ -1.99
NPL3Q01560 snR46snR46 197 nt2.62□□□□□ -1.99
NPL3Q01560 MDM20YOL076W 2391 nt2.62□□□□□ -1.99
NPL3Q01560 JSN1YJR091C 3276 nt2.62□□□□□ -1.99
NPL3Q01560 VTC3YPL019C 2508 nt2.62□□□□□ -1.99
NPL3Q01560 CFT2YLR115W 2580 nt2.61□□□□□ -1.99
NPL3Q01560 YDR209CYDR209C 414 nt2.61□□□□□ -1.99
NPL3Q01560 RPS27BYHR021C 249 nt2.61□□□□□ -1.99 RIP-Chip
NPL3Q01560 RPH1YER169W 2391 nt2.61□□□□□ -1.99
NPL3Q01560 IRR1YIL026C 3453 nt2.61□□□□□ -1.99
NPL3Q01560 AXL1YPR122W 3627 nt2.6□□□□□ -1.99
NPL3Q01560 INA22YIR024C 651 nt2.6□□□□□ -1.99
NPL3Q01560 TRX1YLR043C 312 nt2.6□□□□□ -1.99
NPL3Q01560 YLR255CYLR255C 354 nt2.6□□□□□ -1.99
NPL3Q01560 YBL053WYBL053W 375 nt2.6□□□□□ -1.99
NPL3Q01560 snR43snR43 209 nt2.6□□□□□ -1.99
NPL3Q01560 SRO77YBL106C 3033 nt2.6□□□□□ -1.99
NPL3Q01560 YLL007CYLL007C 1998 nt2.6□□□□□ -1.99
NPL3Q01560 SMC6YLR383W 3345 nt2.59□□□□□ -1.99
NPL3Q01560 MUK1YPL070W 1839 nt2.59□□□□□ -1.99
NPL3Q01560 PTP3YER075C 2787 nt2.59□□□□□ -1.99
NPL3Q01560 EDS1YBR033W 2760 nt2.59□□□□□ -1.99
NPL3Q01560 FKS3YMR306W 5358 nt2.59□□□□□ -1.99
NPL3Q01560 YOR394C-AYOR394C-A 168 nt2.59□□□□□ -1.99
NPL3Q01560 PDR3YBL005W 2931 nt2.59□□□□□ -1.99
NPL3Q01560 YCR043CYCR043C 384 nt2.58□□□□□ -2 RIP-Chip
NPL3Q01560 snR74snR74 88 nt2.58□□□□□ -2
NPL3Q01560 HYP2YEL034W 474 nt2.58□□□□□ -2
NPL3Q01560 RPS22AYJL190C 393 nt2.58□□□□□ -2 RIP-Chip
NPL3Q01560 YKU80YMR106C 1890 nt2.58□□□□□ -2
NPL3Q01560 SWI5YDR146C 2130 nt2.57□□□□□ -2
NPL3Q01560 TRA1YHR099W 11235 nt2.57□□□□□ -2
NPL3Q01560 ISW1YBR245C 3390 nt2.57□□□□□ -2
NPL3Q01560 SLN1YIL147C 3663 nt2.57□□□□□ -2
NPL3Q01560 MET18YIL128W 3099 nt2.57□□□□□ -2
NPL3Q01560 SSQ1YLR369W 1974 nt2.56□□□□□ -2
NPL3Q01560 MNE1YOR350C 1992 nt2.56□□□□□ -2
NPL3Q01560 SLY1YDR189W 2001 nt2.56□□□□□ -2
NPL3Q01560 INP2YMR163C 2118 nt2.56□□□□□ -2
NPL3Q01560 SPT21YMR179W 2277 nt2.56□□□□□ -2
NPL3Q01560 YIR030W-AYIR030W-A 384 nt2.56□□□□□ -2
NPL3Q01560 PAU8YAL068C 363 nt2.56□□□□□ -2
NPL3Q01560 PAU20YOL161C 363 nt2.56□□□□□ -2
NPL3Q01560 VPS54YDR027C 2670 nt2.56□□□□□ -2
NPL3Q01560 PDR1YGL013C 3207 nt2.55□□□□□ -2
NPL3Q01560 PSD2YGR170W 3417 nt2.55□□□□□ -2
NPL3Q01560 TUS1YLR425W 3924 nt2.55□□□□□ -2
NPL3Q01560 ULI1YFR026C 510 nt2.55□□□□□ -2
NPL3Q01560 KRE33YNL132W 3171 nt2.55□□□□□ -2
NPL3Q01560 UBR1YGR184C 5853 nt2.54□□□□□ -2
NPL3Q01560 YOR161W-BYOR161W-B 261 nt2.54□□□□□ -2
NPL3Q01560 PRP42YDR235W 1635 nt2.53□□□□□ -2
NPL3Q01560 RFX1YLR176C 2436 nt2.53□□□□□ -2
NPL3Q01560 YCR102W-AYCR102W-A 198 nt2.53□□□□□ -2
NPL3Q01560 EMP24YGL200C 612 nt2.53□□□□□ -2 RIP-Chip
NPL3Q01560 PLC1YPL268W 2610 nt2.53□□□□□ -2.01
NPL3Q01560 YHR032W-AYHR032W-A 180 nt2.52□□□□□ -2.01
NPL3Q01560 RPS17AYML024W 411 nt2.52□□□□□ -2.01 RIP-Chip
NPL3Q01560 RPB10YOR210W 213 nt2.52□□□□□ -2.01
NPL3Q01560 SGS1YMR190C 4344 nt2.51□□□□□ -2.01 RIP-Chip
NPL3Q01560 NEW1YPL226W 3591 nt2.51□□□□□ -2.01
NPL3Q01560 YHR073W-AYHR073W-A 177 nt2.51□□□□□ -2.01
NPL3Q01560 VPS8YAL002W 3825 nt2.51□□□□□ -2.01
NPL3Q01560 YLR154W-AYLR154W-A 186 nt2.51□□□□□ -2.01
NPL3Q01560 CLN3YAL040C 1743 nt2.51□□□□□ -2.01
NPL3Q01560 SPF1YEL031W 3648 nt2.5□□□□□ -2.01
NPL3Q01560 SNU13YEL026W 381 nt2.5□□□□□ -2.01 RIP-Chip
NPL3Q01560 SGF11YPL047W 300 nt2.5□□□□□ -2.01 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 39.1 ms