Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 SKI3YPR189W 4299 nt1.65□□□□□ -2.15
RPA49Q01080 MLH3YPL164C 2148 nt1.64□□□□□ -2.15
RPA49Q01080 PXA2YKL188C 2562 nt1.64□□□□□ -2.15
RPA49Q01080 YGR174W-AYGR174W-A 87 nt1.64□□□□□ -2.15
RPA49Q01080 YKL083WYKL083W 615 nt1.64□□□□□ -2.15
RPA49Q01080 YLR434CYLR434C 384 nt1.64□□□□□ -2.15
RPA49Q01080 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
RPA49Q01080 SLY1YDR189W 2001 nt1.64□□□□□ -2.15
RPA49Q01080 YLR035C-AYLR035C-A 3468 nt1.64□□□□□ -2.15
RPA49Q01080 YLR419WYLR419W 4308 nt1.63□□□□□ -2.15
RPA49Q01080 RPL31AYDL075W 342 nt1.63□□□□□ -2.15
RPA49Q01080 YDR003W-AYDR003W-A 123 nt1.63□□□□□ -2.15
RPA49Q01080 RTR1YER139C 681 nt1.63□□□□□ -2.15
RPA49Q01080 YHR138CYHR138C 345 nt1.63□□□□□ -2.15
RPA49Q01080 YIL102CYIL102C 306 nt1.63□□□□□ -2.15
RPA49Q01080 BSC3YLR465C 309 nt1.63□□□□□ -2.15
RPA49Q01080 YOP1YPR028W 543 nt1.63□□□□□ -2.15
RPA49Q01080 LYS14YDR034C 2373 nt1.63□□□□□ -2.15
RPA49Q01080 YOR019WYOR019W 2193 nt1.62□□□□□ -2.15
RPA49Q01080 CHS1YNL192W 3396 nt1.62□□□□□ -2.15
RPA49Q01080 YML003WYML003W 873 nt1.62□□□□□ -2.15
RPA49Q01080 HCH1YNL281W 462 nt1.62□□□□□ -2.15
RPA49Q01080 YAP6YDR259C 1152 nt1.61□□□□□ -2.15
RPA49Q01080 PFD1YJL179W 330 nt1.61□□□□□ -2.15
RPA49Q01080 CDC31YOR257W 486 nt1.61□□□□□ -2.15
RPA49Q01080 SBE22YHR103W 2559 nt1.61□□□□□ -2.15
RPA49Q01080 YAL068W-AYAL068W-A 255 nt1.6□□□□□ -2.15
RPA49Q01080 RPL26AYLR344W 384 nt1.6□□□□□ -2.15
RPA49Q01080 DGR2YKL121W 2559 nt1.6□□□□□ -2.15
RPA49Q01080 RFX1YLR176C 2436 nt1.6□□□□□ -2.15
RPA49Q01080 MSH3YCR092C 3057 nt1.59□□□□□ -2.15
RPA49Q01080 YOR293C-AYOR293C-A 150 nt1.59□□□□□ -2.15
RPA49Q01080 SPO24YPR036W-A 204 nt1.59□□□□□ -2.15
RPA49Q01080 SEC5YDR166C 2916 nt1.58□□□□□ -2.16
RPA49Q01080 YBP1YBR216C 2025 nt1.58□□□□□ -2.16
RPA49Q01080 ISF1YMR081C 1017 nt1.58□□□□□ -2.16
RPA49Q01080 YMR230W-AYMR230W-A 189 nt1.58□□□□□ -2.16
RPA49Q01080 SAS3YBL052C 2496 nt1.57□□□□□ -2.16
RPA49Q01080 SRP14YDL092W 441 nt1.57□□□□□ -2.16
RPA49Q01080 CYC7YEL039C 342 nt1.57□□□□□ -2.16
RPA49Q01080 YPR170W-AYPR170W-A 186 nt1.57□□□□□ -2.16
RPA49Q01080 TBS1YBR150C 3285 nt1.57□□□□□ -2.16
RPA49Q01080 EMC5YIL027C 426 nt1.56□□□□□ -2.16
RPA49Q01080 YOR121CYOR121C 306 nt1.56□□□□□ -2.16
RPA49Q01080 MON2YNL297C 4911 nt1.56□□□□□ -2.16
RPA49Q01080 YLL032CYLL032C 2478 nt1.55□□□□□ -2.16
RPA49Q01080 HIT1YJR055W 495 nt1.55□□□□□ -2.16
RPA49Q01080 MRPL31YKL138C 396 nt1.55□□□□□ -2.16
RPA49Q01080 BST1YFL025C 3090 nt1.55□□□□□ -2.16
RPA49Q01080 MUK1YPL070W 1839 nt1.54□□□□□ -2.16
RPA49Q01080 PAU2YEL049W 363 nt1.54□□□□□ -2.16
RPA49Q01080 YER137W-AYER137W-A 306 nt1.54□□□□□ -2.16
RPA49Q01080 ADR1YDR216W 3972 nt1.54□□□□□ -2.16
RPA49Q01080 SXM1YDR395W 2835 nt1.54□□□□□ -2.16
RPA49Q01080 NCA2YPR155C 1851 nt1.54□□□□□ -2.16
RPA49Q01080 PIG1YLR273C 1947 nt1.52□□□□□ -2.17
RPA49Q01080 RAD50YNL250W 3939 nt1.52□□□□□ -2.17
RPA49Q01080 YHL041WYHL041W 450 nt1.52□□□□□ -2.17
RPA49Q01080 YJL022WYJL022W 309 nt1.52□□□□□ -2.17
RPA49Q01080 COF1YLL050C 432 nt1.52□□□□□ -2.17
RPA49Q01080 YLR140WYLR140W 327 nt1.52□□□□□ -2.17
RPA49Q01080 YNL058CYNL058C 951 nt1.52□□□□□ -2.17
RPA49Q01080 RPB10YOR210W 213 nt1.52□□□□□ -2.17
RPA49Q01080 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
RPA49Q01080 UFD2YDL190C 2886 nt1.51□□□□□ -2.17
RPA49Q01080 SDH2YLL041C 801 nt1.51□□□□□ -2.17
RPA49Q01080 YOR376WYOR376W 369 nt1.51□□□□□ -2.17
RPA49Q01080 YPR012WYPR012W 255 nt1.51□□□□□ -2.17
RPA49Q01080 NUT2YPR168W 474 nt1.51□□□□□ -2.17
RPA49Q01080 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
RPA49Q01080 NOC3YLR002C 1992 nt1.5□□□□□ -2.17
RPA49Q01080 KCS1YDR017C 3153 nt1.5□□□□□ -2.17
RPA49Q01080 SGO1YOR073W 1773 nt1.5□□□□□ -2.17
RPA49Q01080 YDR118W-AYDR118W-A 117 nt1.5□□□□□ -2.17
RPA49Q01080 YAL063C-AYAL063C-A 291 nt1.5□□□□□ -2.17
RPA49Q01080 UPS1YLR193C 528 nt1.5□□□□□ -2.17
RPA49Q01080 IRC23YOR044W 474 nt1.5□□□□□ -2.17
RPA49Q01080 YLL054CYLL054C 2532 nt1.5□□□□□ -2.17
RPA49Q01080 SMC4YLR086W 4257 nt1.5□□□□□ -2.17
RPA49Q01080 MVP1YMR004W 1536 nt1.5□□□□□ -2.17
RPA49Q01080 ALK1YGL021W 2283 nt1.49□□□□□ -2.17
RPA49Q01080 FIG2YCR089W 4830 nt1.49□□□□□ -2.17
RPA49Q01080 YJR003CYJR003C 1560 nt1.49□□□□□ -2.17
RPA49Q01080 AI5_ALPHAQ0070 1893 nt1.49□□□□□ -2.17
RPA49Q01080 tQ(UUG)E2tQ(UUG)E2 72 nt1.48□□□□□ -2.17
RPA49Q01080 RPL40BYKR094C 387 nt1.48□□□□□ -2.17
RPA49Q01080 TIM18YOR297C 579 nt1.48□□□□□ -2.17
RPA49Q01080 snR51snR51 107 nt1.48□□□□□ -2.17
RPA49Q01080 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
RPA49Q01080 RKM1YPL208W 1752 nt1.47□□□□□ -2.17
RPA49Q01080 YOR108C-AYOR108C-A 210 nt1.47□□□□□ -2.17
RPA49Q01080 PAC1YOR269W 1485 nt1.47□□□□□ -2.17
RPA49Q01080 SPC98YNL126W 2541 nt1.47□□□□□ -2.17
RPA49Q01080 APL2YKL135C 2181 nt1.47□□□□□ -2.17
RPA49Q01080 VPS54YDR027C 2670 nt1.46□□□□□ -2.18
RPA49Q01080 VPS55YJR044C 423 nt1.46□□□□□ -2.18
RPA49Q01080 YMR141W-AYMR141W-A 225 nt1.46□□□□□ -2.18
RPA49Q01080 ZIP2YGL249W 2115 nt1.46□□□□□ -2.18
RPA49Q01080 SLX4YLR135W 2247 nt1.46□□□□□ -2.18
RPA49Q01080 YGL217CYGL217C 342 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 138.4 ms