Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	YDR114C	YDR114C	303 nt		-1.13	□□□□□ -2.59
DDR2	P89113	PHO92	YDR374C	921 nt		-1.13	□□□□□ -2.59
DDR2	P89113	YJR141W	YJR141W	1044 nt		-1.13	□□□□□ -2.59
DDR2	P89113	RPS16A	YMR143W	432 nt		-1.13	□□□□□ -2.59
DDR2	P89113	YNL211C	YNL211C	261 nt		-1.13	□□□□□ -2.59
DDR2	P89113	YOL150C	YOL150C	312 nt		-1.13	□□□□□ -2.59
DDR2	P89113	TAP42	YMR028W	1101 nt		-1.14	□□□□□ -2.59
DDR2	P89113	YOL024W	YOL024W	519 nt		-1.14	□□□□□ -2.59
DDR2	P89113	YHR212C	YHR212C	336 nt		-1.15	□□□□□ -2.59
DDR2	P89113	YAR060C	YAR060C	336 nt		-1.15	□□□□□ -2.59
DDR2	P89113	HTB2	YBL002W	396 nt		-1.15	□□□□□ -2.59
DDR2	P89113	RPS10A	YOR293W	318 nt		-1.15	□□□□□ -2.59
DDR2	P89113	FIG1	YBR040W	897 nt		-1.15	□□□□□ -2.59
DDR2	P89113	AME1	YBR211C	975 nt		-1.15	□□□□□ -2.59
DDR2	P89113	YPL060C-A	YPL060C-A	3315 nt		-1.15	□□□□□ -2.59
DDR2	P89113	MMS2	YGL087C	414 nt		-1.16	□□□□□ -2.6
DDR2	P89113	RPS26A	YGL189C	360 nt		-1.16	□□□□□ -2.6
DDR2	P89113	UPS1	YLR193C	528 nt		-1.16	□□□□□ -2.6
DDR2	P89113	NOT5	YPR072W	1683 nt		-1.16	□□□□□ -2.6
DDR2	P89113	COX6	YHR051W	447 nt		-1.17	□□□□□ -2.6
DDR2	P89113	BSC3	YLR465C	309 nt		-1.17	□□□□□ -2.6
DDR2	P89113	snR161	snR161	161 nt		-1.17	□□□□□ -2.6
DDR2	P89113	YPL205C	YPL205C	345 nt		-1.17	□□□□□ -2.6
DDR2	P89113	YKL183C-A	YKL183C-A	213 nt		-1.18	□□□□□ -2.6
DDR2	P89113	NEJ1	YLR265C	1029 nt		-1.18	□□□□□ -2.6
DDR2	P89113	GSP1	YLR293C	660 nt		-1.18	□□□□□ -2.6
DDR2	P89113	MMS4	YBR098W	2076 nt		-1.19	□□□□□ -2.6
DDR2	P89113	TAH1	YCR060W	336 nt		-1.19	□□□□□ -2.6
DDR2	P89113	YKU70	YMR284W	1809 nt		-1.19	□□□□□ -2.6
DDR2	P89113	COY1	YKL179C	2040 nt		-1.2	□□□□□ -2.6
DDR2	P89113	YHR139C-A	YHR139C-A	312 nt		-1.2	□□□□□ -2.6
DDR2	P89113	SPR2	YOR214C	711 nt		-1.2	□□□□□ -2.6
DDR2	P89113	NTC20	YBR188C	423 nt		-1.2	□□□□□ -2.6
DDR2	P89113	YCR038W-A	YCR038W-A	126 nt		-1.21	□□□□□ -2.6
DDR2	P89113	YJL127C-B	YJL127C-B	159 nt		-1.21	□□□□□ -2.6
DDR2	P89113	KAR1	YNL188W	1302 nt		-1.21	□□□□□ -2.6
DDR2	P89113	RMD6	YEL072W	696 nt		-1.22	□□□□□ -2.6
DDR2	P89113	YBR223W-A	YBR223W-A	120 nt		-1.22	□□□□□ -2.6
DDR2	P89113	OLI1	Q0130	231 nt		-1.23	□□□□□ -2.61
DDR2	P89113	YPR096C	YPR096C	303 nt		-1.23	□□□□□ -2.61
DDR2	P89113	RMD5	YDR255C	1266 nt		-1.24	□□□□□ -2.61
DDR2	P89113	YNL146W	YNL146W	303 nt		-1.24	□□□□□ -2.61
DDR2	P89113	YDR029W	YDR029W	315 nt		-1.25	□□□□□ -2.61
DDR2	P89113	MAM33	YIL070C	801 nt		-1.25	□□□□□ -2.61
DDR2	P89113	COG6	YNL041C	2520 nt		-1.26	□□□□□ -2.61
DDR2	P89113	AI3	Q0060	1248 nt		-1.27	□□□□□ -2.61
DDR2	P89113	YDR344C	YDR344C	444 nt		-1.27	□□□□□ -2.61
DDR2	P89113	CHZ1	YER030W	462 nt		-1.27	□□□□□ -2.61
DDR2	P89113	COG1	YGL223C	1254 nt		-1.27	□□□□□ -2.61
DDR2	P89113	GPX2	YBR244W	489 nt		-1.27	□□□□□ -2.61
DDR2	P89113	ENV11	YGR071C	2583 nt		-1.27	□□□□□ -2.61
DDR2	P89113	ASE1	YOR058C	2658 nt		-1.28	□□□□□ -2.61
DDR2	P89113	ECM9	YKR004C	1134 nt		-1.28	□□□□□ -2.61
DDR2	P89113	BET5	YML077W	480 nt		-1.28	□□□□□ -2.61
DDR2	P89113	SRP14	YDL092W	441 nt		-1.29	□□□□□ -2.62
DDR2	P89113	NFU1	YKL040C	771 nt		-1.29	□□□□□ -2.62
DDR2	P89113	YHL009W-B	YHL009W-B	5409 nt		-1.29	□□□□□ -2.62
DDR2	P89113	YHR145C	YHR145C	357 nt		-1.3	□□□□□ -2.62
DDR2	P89113	SWM2	YNR004W	441 nt		-1.3	□□□□□ -2.62
DDR2	P89113	YCR090C	YCR090C	549 nt		-1.31	□□□□□ -2.62
DDR2	P89113	GEP7	YGL057C	864 nt		-1.31	□□□□□ -2.62
DDR2	P89113	LCD1	YDR499W	2244 nt		-1.31	□□□□□ -2.62
DDR2	P89113	snR68	snR68	136 nt		-1.32	□□□□□ -2.62
DDR2	P89113	OST4	YDL232W	111 nt		-1.33	□□□□□ -2.62
DDR2	P89113	YEL010W	YEL010W	351 nt		-1.33	□□□□□ -2.62
DDR2	P89113	CSM4	YPL200W	471 nt		-1.33	□□□□□ -2.62
DDR2	P89113	PEP3	YLR148W	2757 nt		-1.34	□□□□□ -2.62
DDR2	P89113	MCM10	YIL150C	1716 nt		-1.34	□□□□□ -2.62
DDR2	P89113	EMC4	YGL231C	573 nt		-1.34	□□□□□ -2.62
DDR2	P89113	YOL118C	YOL118C	309 nt		-1.34	□□□□□ -2.62
DDR2	P89113	YNL067W-B	YNL067W-B	141 nt		-1.35	□□□□□ -2.63
DDR2	P89113	MFA1	YDR461W	111 nt		-1.36	□□□□□ -2.63
DDR2	P89113	YHL042W	YHL042W	453 nt		-1.36	□□□□□ -2.63
DDR2	P89113	YOR020W-A	YOR020W-A	273 nt		-1.36	□□□□□ -2.63
DDR2	P89113	TFB6	YOR352W	1032 nt		-1.36	□□□□□ -2.63
DDR2	P89113	GIM5	YML094W	492 nt		-1.37	□□□□□ -2.63
DDR2	P89113	ERV14	YGL054C	417 nt		-1.38	□□□□□ -2.63
DDR2	P89113	YLR311C	YLR311C	348 nt		-1.38	□□□□□ -2.63
DDR2	P89113	HTB1	YDR224C	396 nt		-1.39	□□□□□ -2.63
DDR2	P89113	SPO11	YHL022C	1197 nt		-1.39	□□□□□ -2.63
DDR2	P89113	YJL120W	YJL120W	324 nt		-1.39	□□□□□ -2.63
DDR2	P89113	YNR021W	YNR021W	1215 nt		-1.39	□□□□□ -2.63
DDR2	P89113	CDC33	YOL139C	642 nt		-1.4	□□□□□ -2.63
DDR2	P89113	MVB12	YGR206W	306 nt		-1.41	□□□□□ -2.64
DDR2	P89113	RTC6	YPL183W-A	282 nt		-1.41	□□□□□ -2.64
DDR2	P89113	YFR057W	YFR057W	456 nt		-1.42	□□□□□ -2.64
DDR2	P89113	CRG1	YHR209W	876 nt		-1.42	□□□□□ -2.64
DDR2	P89113	YBR062C	YBR062C	543 nt		-1.42	□□□□□ -2.64
DDR2	P89113	YER038W-A	YER038W-A	381 nt		-1.44	□□□□□ -2.64
DDR2	P89113	YKL023C-A	YKL023C-A	228 nt		-1.44	□□□□□ -2.64
DDR2	P89113	MRPS8	YMR158W	468 nt		-1.44	□□□□□ -2.64
DDR2	P89113	YOR345C	YOR345C	351 nt		-1.44	□□□□□ -2.64
DDR2	P89113	IPP1	YBR011C	864 nt		-1.45	□□□□□ -2.64
DDR2	P89113	ZIP1	YDR285W	2628 nt		-1.45	□□□□□ -2.64
DDR2	P89113	YPL044C	YPL044C	549 nt		-1.46	□□□□□ -2.64
DDR2	P89113	AEP1	YMR064W	1557 nt		-1.47	□□□□□ -2.64
DDR2	P89113	YMR158W-B	YMR158W-B	321 nt		-1.47	□□□□□ -2.64
DDR2	P89113	YNL089C	YNL089C	477 nt		-1.47	□□□□□ -2.64
DDR2	P89113	YNR077C	YNR077C	255 nt		-1.47	□□□□□ -2.64
DDR2	P89113	YGR115C	YGR115C	780 nt		-1.48	□□□□□ -2.65

Retrieved 100 of 7,029 protein–RNA pairs in 78.5 ms