Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 RPS17AYML024W 411 nt2.98□□□□□ -1.93
SSF1P38789 SIR3YLR442C 2937 nt2.98□□□□□ -1.93
SSF1P38789 SSS1YDR086C 243 nt2.97□□□□□ -1.93
SSF1P38789 YJL197C-AYJL197C-A 282 nt2.97□□□□□ -1.93
SSF1P38789 LYS14YDR034C 2373 nt2.97□□□□□ -1.93
SSF1P38789 VIK1YPL253C 1944 nt2.97□□□□□ -1.93
SSF1P38789 NUM1YDR150W 8247 nt2.96□□□□□ -1.94
SSF1P38789 YGL007C-AYGL007C-A 87 nt2.96□□□□□ -1.94
SSF1P38789 YLR154W-AYLR154W-A 186 nt2.96□□□□□ -1.94
SSF1P38789 SPT21YMR179W 2277 nt2.96□□□□□ -1.94
SSF1P38789 CLN3YAL040C 1743 nt2.96□□□□□ -1.94
SSF1P38789 UBR1YGR184C 5853 nt2.95□□□□□ -1.94
SSF1P38789 MRP10YDL045W-A 288 nt2.95□□□□□ -1.94
SSF1P38789 YRB1YDR002W 606 nt2.95□□□□□ -1.94
SSF1P38789 YGL052WYGL052W 306 nt2.95□□□□□ -1.94
SSF1P38789 PAU18YLL064C 363 nt2.95□□□□□ -1.94
SSF1P38789 PAU6YNR076W 363 nt2.95□□□□□ -1.94
SSF1P38789 MDM20YOL076W 2391 nt2.95□□□□□ -1.94
SSF1P38789 INO80YGL150C 4470 nt2.94□□□□□ -1.94
SSF1P38789 YHR071C-AYHR071C-A 321 nt2.94□□□□□ -1.94
SSF1P38789 YOR055WYOR055W 435 nt2.94□□□□□ -1.94
SSF1P38789 ARP8YOR141C 2646 nt2.93□□□□□ -1.94
SSF1P38789 PHO91YNR013C 2685 nt2.93□□□□□ -1.94
SSF1P38789 YIL156W-BYIL156W-B 222 nt2.93□□□□□ -1.94
SSF1P38789 YJL135WYJL135W 318 nt2.93□□□□□ -1.94
SSF1P38789 YCK3YER123W 1575 nt2.92□□□□□ -1.94
SSF1P38789 PAU2YEL049W 363 nt2.92□□□□□ -1.94
SSF1P38789 YCL023CYCL023C 348 nt2.92□□□□□ -1.94
SSF1P38789 DCP2YNL118C 2913 nt2.92□□□□□ -1.94
SSF1P38789 ZRG17YNR039C 1818 nt2.91□□□□□ -1.94
SSF1P38789 YBL005W-BYBL005W-B 5268 nt2.91□□□□□ -1.94
SSF1P38789 YLR120W-AYLR120W-A 102 nt2.91□□□□□ -1.94
SSF1P38789 IES4YOR189W 351 nt2.91□□□□□ -1.94
SSF1P38789 PDR11YIL013C 4236 nt2.91□□□□□ -1.94
SSF1P38789 CDC60YPL160W 3273 nt2.91□□□□□ -1.94
SSF1P38789 TRL1YJL087C 2484 nt2.91□□□□□ -1.94
SSF1P38789 TIM9YEL020W-A 264 nt2.9□□□□□ -1.95
SSF1P38789 SCP160YJL080C 3669 nt2.89□□□□□ -1.95
SSF1P38789 PAM16YJL104W 450 nt2.89□□□□□ -1.95
SSF1P38789 PDE2YOR360C 1581 nt2.89□□□□□ -1.95
SSF1P38789 MSB1YOR188W 3414 nt2.89□□□□□ -1.95
SSF1P38789 SAP1YER047C 2694 nt2.89□□□□□ -1.95
SSF1P38789 YDR341CYDR341C 1824 nt2.89□□□□□ -1.95
SSF1P38789 YLL032CYLL032C 2478 nt2.88□□□□□ -1.95
SSF1P38789 YPR097WYPR097W 3222 nt2.88□□□□□ -1.95
SSF1P38789 SRB8YCR081W 4284 nt2.88□□□□□ -1.95
SSF1P38789 snR72snR72 98 nt2.88□□□□□ -1.95
SSF1P38789 YCL046WYCL046W 324 nt2.88□□□□□ -1.95
SSF1P38789 RTT107YHR154W 3213 nt2.88□□□□□ -1.95
SSF1P38789 ZIP1YDR285W 2628 nt2.88□□□□□ -1.95
SSF1P38789 MAK10YEL053C 2202 nt2.87□□□□□ -1.95
SSF1P38789 NIP100YPL174C 2607 nt2.87□□□□□ -1.95
SSF1P38789 tF(GAA)QtF(GAA)Q 75 nt2.87□□□□□ -1.95
SSF1P38789 INA22YIR024C 651 nt2.87□□□□□ -1.95
SSF1P38789 NPR2YEL062W 1848 nt2.86□□□□□ -1.95
SSF1P38789 YDR003W-AYDR003W-A 123 nt2.86□□□□□ -1.95
SSF1P38789 BRP1YGL007W 378 nt2.86□□□□□ -1.95
SSF1P38789 PFD1YJL179W 330 nt2.86□□□□□ -1.95
SSF1P38789 YMR321CYMR321C 318 nt2.86□□□□□ -1.95
SSF1P38789 YOL160WYOL160W 342 nt2.86□□□□□ -1.95
SSF1P38789 NUP170YBL079W 4509 nt2.86□□□□□ -1.95
SSF1P38789 PET309YLR067C 2898 nt2.86□□□□□ -1.95
SSF1P38789 SCD5YOR329C 2619 nt2.86□□□□□ -1.95
SSF1P38789 ISD11YER048W-A 285 nt2.85□□□□□ -1.95
SSF1P38789 YEF3YLR249W 3135 nt2.85□□□□□ -1.95
SSF1P38789 VPS13YLL040C 9435 nt2.84□□□□□ -1.95
SSF1P38789 STE11YLR362W 2154 nt2.84□□□□□ -1.95
SSF1P38789 NAM7YMR080C 2916 nt2.84□□□□□ -1.95
SSF1P38789 VPS54YDR027C 2670 nt2.84□□□□□ -1.95
SSF1P38789 YER088C-AYER088C-A 324 nt2.84□□□□□ -1.95
SSF1P38789 YBL012CYBL012C 402 nt2.84□□□□□ -1.95
SSF1P38789 NOP14YDL148C 2433 nt2.84□□□□□ -1.95
SSF1P38789 RTT101YJL047C 2529 nt2.84□□□□□ -1.96
SSF1P38789 SYH1YPL105C 2550 nt2.84□□□□□ -1.96
SSF1P38789 APL5YPL195W 2799 nt2.83□□□□□ -1.96
SSF1P38789 SSD1YDR293C 3753 nt2.83□□□□□ -1.96
SSF1P38789 GIP3YPL137C 3831 nt2.83□□□□□ -1.96
SSF1P38789 SRP14YDL092W 441 nt2.83□□□□□ -1.96
SSF1P38789 YNL198CYNL198C 303 nt2.83□□□□□ -1.96
SSF1P38789 YOR015WYOR015W 360 nt2.83□□□□□ -1.96
SSF1P38789 YOR108C-AYOR108C-A 210 nt2.83□□□□□ -1.96
SSF1P38789 VPS55YJR044C 423 nt2.82□□□□□ -1.96
SSF1P38789 YKR075W-AYKR075W-A 270 nt2.82□□□□□ -1.96
SSF1P38789 RAV1YJR033C 4074 nt2.82□□□□□ -1.96
SSF1P38789 SAS3YBL052C 2496 nt2.82□□□□□ -1.96
SSF1P38789 RRT15YLR162W-A 189 nt2.81□□□□□ -1.96
SSF1P38789 SIR4YDR227W 4077 nt2.8□□□□□ -1.96
SSF1P38789 YDL185C-AYDL185C-A 228 nt2.8□□□□□ -1.96
SSF1P38789 YOR218CYOR218C 420 nt2.8□□□□□ -1.96
SSF1P38789 YOR302WYOR302W 78 nt2.8□□□□□ -1.96
SSF1P38789 MPT5YGL178W 2580 nt2.8□□□□□ -1.96
SSF1P38789 IST2YBR086C 2841 nt2.79□□□□□ -1.96
SSF1P38789 RPL37BYDR500C 267 nt2.79□□□□□ -1.96
SSF1P38789 YMR242W-AYMR242W-A 90 nt2.79□□□□□ -1.96
SSF1P38789 LCL1YPL056C 306 nt2.79□□□□□ -1.96
SSF1P38789 YFR016CYFR016C 3702 nt2.79□□□□□ -1.96
SSF1P38789 UBP1YDL122W 2430 nt2.79□□□□□ -1.96
SSF1P38789 SPC98YNL126W 2541 nt2.78□□□□□ -1.96
SSF1P38789 VTC1YER072W 390 nt2.78□□□□□ -1.96
SSF1P38789 RPS27BYHR021C 249 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 51.2 ms