Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YOR329W-AYOR329W-A 210 nt2.62□□□□□ -1.99
TY1A-LR2P0CX72 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
TY1A-LR2P0CX72 DYN1YKR054C 12279 nt2.62□□□□□ -1.99
TY1A-LR2P0CX72 AIM44YPL158C 2277 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 YDL196WYDL196W 330 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 PNC1YGL037C 651 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 RPL22AYLR061W 366 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 YBR221W-AYBR221W-A 105 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 YCL046WYCL046W 324 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 PIG1YLR273C 1947 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 YME2YMR302C 2553 nt2.61□□□□□ -1.99
TY1A-LR2P0CX72 FIG4YNL325C 2640 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 RIF1YBR275C 5751 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 YHR032W-AYHR032W-A 180 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 ATP7YKL016C 525 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 RAD34YDR314C 2079 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 YNL018CYNL018C 1839 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 RPO41YFL036W 4056 nt2.6□□□□□ -1.99
TY1A-LR2P0CX72 SAP1YER047C 2694 nt2.59□□□□□ -1.99
TY1A-LR2P0CX72 YHR086W-AYHR086W-A 162 nt2.59□□□□□ -1.99
TY1A-LR2P0CX72 PIP2YOR363C 2991 nt2.58□□□□□ -2
TY1A-LR2P0CX72 NOP14YDL148C 2433 nt2.57□□□□□ -2
TY1A-LR2P0CX72 SPO14YKR031C 5052 nt2.57□□□□□ -2
TY1A-LR2P0CX72 TOM1YDR457W 9807 nt2.57□□□□□ -2
TY1A-LR2P0CX72 NOC3YLR002C 1992 nt2.56□□□□□ -2
TY1A-LR2P0CX72 MDM1YML104C 3384 nt2.56□□□□□ -2
TY1A-LR2P0CX72 YHL015W-AYHL015W-A 84 nt2.56□□□□□ -2
TY1A-LR2P0CX72 YOR102WYOR102W 351 nt2.56□□□□□ -2
TY1A-LR2P0CX72 NAM7YMR080C 2916 nt2.56□□□□□ -2
TY1A-LR2P0CX72 FRE2YKL220C 2136 nt2.56□□□□□ -2
TY1A-LR2P0CX72 MAK10YEL053C 2202 nt2.56□□□□□ -2
TY1A-LR2P0CX72 HAL9YOL089C 3093 nt2.55□□□□□ -2
TY1A-LR2P0CX72 PAU3YCR104W 375 nt2.55□□□□□ -2
TY1A-LR2P0CX72 BRP1YGL007W 378 nt2.55□□□□□ -2
TY1A-LR2P0CX72 MAD1YGL086W 2250 nt2.55□□□□□ -2
TY1A-LR2P0CX72 SBE22YHR103W 2559 nt2.55□□□□□ -2
TY1A-LR2P0CX72 RPS22AYJL190C 393 nt2.55□□□□□ -2
TY1A-LR2P0CX72 YBL109WYBL109W 336 nt2.55□□□□□ -2
TY1A-LR2P0CX72 PTP2YOR208W 2253 nt2.55□□□□□ -2
TY1A-LR2P0CX72 ACM1YPL267W 630 nt2.55□□□□□ -2
TY1A-LR2P0CX72 MMS1YPR164W 4224 nt2.55□□□□□ -2
TY1A-LR2P0CX72 JSN1YJR091C 3276 nt2.55□□□□□ -2
TY1A-LR2P0CX72 EDS1YBR033W 2760 nt2.54□□□□□ -2
TY1A-LR2P0CX72 tQ(UUG)BtQ(UUG)B 72 nt2.54□□□□□ -2
TY1A-LR2P0CX72 YOR314W-AYOR314W-A 111 nt2.54□□□□□ -2
TY1A-LR2P0CX72 LCL1YPL056C 306 nt2.54□□□□□ -2
TY1A-LR2P0CX72 ECM29YHL030W 5607 nt2.54□□□□□ -2
TY1A-LR2P0CX72 TRS130YMR218C 3309 nt2.53□□□□□ -2
TY1A-LR2P0CX72 TUS1YLR425W 3924 nt2.53□□□□□ -2
TY1A-LR2P0CX72 YJL022WYJL022W 309 nt2.53□□□□□ -2
TY1A-LR2P0CX72 YPR203WYPR203W 309 nt2.53□□□□□ -2
TY1A-LR2P0CX72 VPS8YAL002W 3825 nt2.53□□□□□ -2
TY1A-LR2P0CX72 ILS1YBL076C 3219 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 PBY1YBR094W 2262 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 RPL31AYDL075W 342 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 YCL001W-BYCL001W-B 255 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 SLD3YGL113W 2007 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 PRP8YHR165C 7242 nt2.52□□□□□ -2.01
TY1A-LR2P0CX72 AHC1YOR023C 1701 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 BNR1YIL159W 4128 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 HSH155YMR288W 2916 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 tL(UAG)JtL(UAG)J 82 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 tL(UAG)L1tL(UAG)L1 82 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 tL(UAG)L2tL(UAG)L2 82 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 KTI11YBL071W-A 249 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 POL3YDL102W 3294 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 YLR035C-AYLR035C-A 3468 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 CAT2YML042W 2013 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 DGR2YKL121W 2559 nt2.51□□□□□ -2.01
TY1A-LR2P0CX72 MET18YIL128W 3099 nt2.5□□□□□ -2.01
TY1A-LR2P0CX72 YDR209CYDR209C 414 nt2.5□□□□□ -2.01
TY1A-LR2P0CX72 APL2YKL135C 2181 nt2.5□□□□□ -2.01
TY1A-LR2P0CX72 YMR326CYMR326C 309 nt2.49□□□□□ -2.01
TY1A-LR2P0CX72 ENV11YGR071C 2583 nt2.49□□□□□ -2.01
TY1A-LR2P0CX72 MLH3YPL164C 2148 nt2.48□□□□□ -2.01
TY1A-LR2P0CX72 GEA1YJR031C 4227 nt2.48□□□□□ -2.01
TY1A-LR2P0CX72 ISW1YBR245C 3390 nt2.48□□□□□ -2.01
TY1A-LR2P0CX72 YPL044CYPL044C 549 nt2.47□□□□□ -2.01
TY1A-LR2P0CX72 BPT1YLL015W 4680 nt2.47□□□□□ -2.01
TY1A-LR2P0CX72 PHO91YNR013C 2685 nt2.46□□□□□ -2.01
TY1A-LR2P0CX72 BUD2YKL092C 3315 nt2.46□□□□□ -2.02
TY1A-LR2P0CX72 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
TY1A-LR2P0CX72 TFB5YDR079C-A 219 nt2.45□□□□□ -2.02
TY1A-LR2P0CX72 RPS29AYLR388W 171 nt2.45□□□□□ -2.02
TY1A-LR2P0CX72 APL5YPL195W 2799 nt2.45□□□□□ -2.02
TY1A-LR2P0CX72 FAR11YNL127W 2862 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 HMI1YOL095C 2121 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 ATG11YPR049C 3537 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 SRO77YBL106C 3033 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 YDR544CYDR544C 429 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 YKL165C-AYKL165C-A 234 nt2.44□□□□□ -2.02
TY1A-LR2P0CX72 SAP190YKR028W 3102 nt2.43□□□□□ -2.02
TY1A-LR2P0CX72 COP1YDL145C 3606 nt2.43□□□□□ -2.02
TY1A-LR2P0CX72 YDR239CYDR239C 2364 nt2.43□□□□□ -2.02
TY1A-LR2P0CX72 CTF4YPR135W 2784 nt2.43□□□□□ -2.02
TY1A-LR2P0CX72 ESC1YMR219W 4977 nt2.42□□□□□ -2.02
TY1A-LR2P0CX72 IES6YEL044W 501 nt2.42□□□□□ -2.02
TY1A-LR2P0CX72 YIL156W-BYIL156W-B 222 nt2.42□□□□□ -2.02
TY1A-LR2P0CX72 CDC60YPL160W 3273 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 107 ms