Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YNL146C-AYNL146C-A 195 nt0.22□□□□□ -2.37
RPS28BP0C0X0 CSM4YPL200W 471 nt0.22□□□□□ -2.37
RPS28BP0C0X0 ESP1YGR098C 4893 nt0.22□□□□□ -2.37
RPS28BP0C0X0 RPC10YHR143W-A 213 nt0.21□□□□□ -2.38
RPS28BP0C0X0 YIL134C-AYIL134C-A 204 nt0.21□□□□□ -2.38
RPS28BP0C0X0 YOR218CYOR218C 420 nt0.21□□□□□ -2.38
RPS28BP0C0X0 YOR248WYOR248W 303 nt0.21□□□□□ -2.38
RPS28BP0C0X0 MLP1YKR095W 5628 nt0.2□□□□□ -2.38
RPS28BP0C0X0 YGL015CYGL015C 393 nt0.2□□□□□ -2.38
RPS28BP0C0X0 RPL9AYGL147C 576 nt0.2□□□□□ -2.38
RPS28BP0C0X0 YER188C-AYER188C-A 300 nt0.19□□□□□ -2.38
RPS28BP0C0X0 LOA1YPR139C 903 nt0.19□□□□□ -2.38
RPS28BP0C0X0 SEC8YPR055W 3198 nt0.18□□□□□ -2.38
RPS28BP0C0X0 UTP20YBL004W 7482 nt0.18□□□□□ -2.38
RPS28BP0C0X0 NPR2YEL062W 1848 nt0.18□□□□□ -2.38
RPS28BP0C0X0 NPC2YDL046W 522 nt0.18□□□□□ -2.38
RPS28BP0C0X0 YHL037CYHL037C 402 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)BtT(AGU)B 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)CtT(AGU)C 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)DtT(AGU)D 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)HtT(AGU)H 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)I1tT(AGU)I1 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)I2tT(AGU)I2 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)JtT(AGU)J 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)N1tT(AGU)N1 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)N2tT(AGU)N2 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)O1tT(AGU)O1 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 tT(AGU)O2tT(AGU)O2 73 nt0.18□□□□□ -2.38
RPS28BP0C0X0 RPS24BYIL069C 408 nt0.18□□□□□ -2.38
RPS28BP0C0X0 YML003WYML003W 873 nt0.18□□□□□ -2.38
RPS28BP0C0X0 MYO1YHR023W 5787 nt0.17□□□□□ -2.38
RPS28BP0C0X0 YER076W-AYER076W-A 348 nt0.17□□□□□ -2.38
RPS28BP0C0X0 SBH1YER087C-B 249 nt0.17□□□□□ -2.38
RPS28BP0C0X0 GMC2YLR445W 567 nt0.17□□□□□ -2.38
RPS28BP0C0X0 RFX1YLR176C 2436 nt0.17□□□□□ -2.38
RPS28BP0C0X0 COG4YPR105C 2586 nt0.16□□□□□ -2.38
RPS28BP0C0X0 IML1YJR138W 4755 nt0.16□□□□□ -2.38
RPS28BP0C0X0 SPO11YHL022C 1197 nt0.16□□□□□ -2.38
RPS28BP0C0X0 MRPL31YKL138C 396 nt0.16□□□□□ -2.38
RPS28BP0C0X0 YBL062WYBL062W 381 nt0.16□□□□□ -2.38
RPS28BP0C0X0 YOL013W-AYOL013W-A 192 nt0.16□□□□□ -2.38
RPS28BP0C0X0 YCK3YER123W 1575 nt0.15□□□□□ -2.38
RPS28BP0C0X0 YJR003CYJR003C 1560 nt0.15□□□□□ -2.38
RPS28BP0C0X0 FMP27YLR454W 7887 nt0.15□□□□□ -2.39
RPS28BP0C0X0 YLR252WYLR252W 306 nt0.15□□□□□ -2.39
RPS28BP0C0X0 YLR366WYLR366W 306 nt0.15□□□□□ -2.39
RPS28BP0C0X0 RPL32YBL092W 393 nt0.15□□□□□ -2.39
RPS28BP0C0X0 SHE9YDR393W 1371 nt0.15□□□□□ -2.39
RPS28BP0C0X0 GPG1YGL121C 381 nt0.14□□□□□ -2.39
RPS28BP0C0X0 SEC28YIL076W 891 nt0.14□□□□□ -2.39
RPS28BP0C0X0 YLR271WYLR271W 825 nt0.14□□□□□ -2.39
RPS28BP0C0X0 RCN2YOR220W 798 nt0.14□□□□□ -2.39
RPS28BP0C0X0 YPR096CYPR096C 303 nt0.14□□□□□ -2.39
RPS28BP0C0X0 TRS65YGR166W 1683 nt0.14□□□□□ -2.39
RPS28BP0C0X0 RPL26BYGR034W 384 nt0.12□□□□□ -2.39
RPS28BP0C0X0 YIL142C-AYIL142C-A 333 nt0.12□□□□□ -2.39
RPS28BP0C0X0 PAM16YJL104W 450 nt0.11□□□□□ -2.39
RPS28BP0C0X0 YPT6YLR262C 648 nt0.11□□□□□ -2.39
RPS28BP0C0X0 UBC7YMR022W 498 nt0.11□□□□□ -2.39
RPS28BP0C0X0 POP7YBR167C 423 nt0.11□□□□□ -2.39
RPS28BP0C0X0 YGR228WYGR228W 345 nt0.1□□□□□ -2.39
RPS28BP0C0X0 YJR079WYJR079W 330 nt0.1□□□□□ -2.39
RPS28BP0C0X0 PPN1YDR452W 2025 nt0.09□□□□□ -2.39
RPS28BP0C0X0 YBL100W-BYBL100W-B 5313 nt0.09□□□□□ -2.39
RPS28BP0C0X0 TMA22YJR014W 597 nt0.09□□□□□ -2.4
RPS28BP0C0X0 SDS22YKL193C 1017 nt0.09□□□□□ -2.4
RPS28BP0C0X0 YOR108C-AYOR108C-A 210 nt0.09□□□□□ -2.4
RPS28BP0C0X0 YFR057WYFR057W 456 nt0.08□□□□□ -2.4
RPS28BP0C0X0 CWC23YGL128C 852 nt0.08□□□□□ -2.4
RPS28BP0C0X0 YGR115CYGR115C 780 nt0.08□□□□□ -2.4
RPS28BP0C0X0 PAU12YGR294W 363 nt0.08□□□□□ -2.4
RPS28BP0C0X0 PKH2YOL100W 3246 nt0.07□□□□□ -2.4
RPS28BP0C0X0 YIR021W-AYIR021W-A 213 nt0.07□□□□□ -2.4
RPS28BP0C0X0 APQ13YJL075C 417 nt0.07□□□□□ -2.4
RPS28BP0C0X0 YMR290W-AYMR290W-A 348 nt0.07□□□□□ -2.4
RPS28BP0C0X0 YBL107W-AYBL107W-A 105 nt0.07□□□□□ -2.4
RPS28BP0C0X0 ZIP2YGL249W 2115 nt0.07□□□□□ -2.4
RPS28BP0C0X0 FYV10YIL097W 1551 nt0.06□□□□□ -2.4
RPS28BP0C0X0 YDR269CYDR269C 324 nt0.06□□□□□ -2.4
RPS28BP0C0X0 YJL127W-AYJL127W-A 117 nt0.06□□□□□ -2.4
RPS28BP0C0X0 YNL054W-BYNL054W-B 5250 nt0.06□□□□□ -2.4
RPS28BP0C0X0 VIK1YPL253C 1944 nt0.05□□□□□ -2.4
RPS28BP0C0X0 PET111YMR257C 2403 nt0.05□□□□□ -2.4
RPS28BP0C0X0 UBP3YER151C 2739 nt0.05□□□□□ -2.4
RPS28BP0C0X0 SUP56tL(CAA)A 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 SUP53tL(CAA)C 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)DtL(CAA)D 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)G1tL(CAA)G1 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 SUP54tL(CAA)G2 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)G3tL(CAA)G3 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)KtL(CAA)K 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)LtL(CAA)L 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)MtL(CAA)M 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 tL(CAA)NtL(CAA)N 82 nt0.05□□□□□ -2.4
RPS28BP0C0X0 BSC3YLR465C 309 nt0.05□□□□□ -2.4
RPS28BP0C0X0 YML009C-AYML009C-A 327 nt0.05□□□□□ -2.4
RPS28BP0C0X0 VAM3YOR106W 852 nt0.05□□□□□ -2.4
RPS28BP0C0X0 YPL044CYPL044C 549 nt0.05□□□□□ -2.4
RPS28BP0C0X0 YCL023CYCL023C 348 nt0.04□□□□□ -2.4
RPS28BP0C0X0 AFR1YDR085C 1863 nt0.03□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms