Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 COS111YBR203W 2775 nt3.02□□□□□ -1.93
PUF3Q07807 AI2Q0055 2565 nt3.01□□□□□ -1.93
PUF3Q07807 snR61snR61 90 nt3.01□□□□□ -1.93
PUF3Q07807 YLR154W-AYLR154W-A 186 nt3.01□□□□□ -1.93
PUF3Q07807 VMA9YCL005W-A 222 nt3.01□□□□□ -1.93
PUF3Q07807 COY1YKL179C 2040 nt3.01□□□□□ -1.93
PUF3Q07807 TCB2YNL087W 3537 nt3.01□□□□□ -1.93
PUF3Q07807 MCM10YIL150C 1716 nt3.01□□□□□ -1.93
PUF3Q07807 PUF4YGL014W 2667 nt3.01□□□□□ -1.93
PUF3Q07807 YLR278CYLR278C 4026 nt3.01□□□□□ -1.93 RIP-Chip
PUF3Q07807 INP2YMR163C 2118 nt3.01□□□□□ -1.93 RIP-Chip
PUF3Q07807 RSN1YMR266W 2862 nt3□□□□□ -1.93
PUF3Q07807 PTC5YOR090C 1719 nt3□□□□□ -1.93
PUF3Q07807 YDR182W-AYDR182W-A 204 nt3□□□□□ -1.93
PUF3Q07807 TIM11YDR322C-A 291 nt3□□□□□ -1.93
PUF3Q07807 SOK1YDR006C 2706 nt3□□□□□ -1.93
PUF3Q07807 YDR341CYDR341C 1824 nt2.99□□□□□ -1.93
PUF3Q07807 RPL23BYER117W 414 nt2.99□□□□□ -1.93
PUF3Q07807 YGL014C-AYGL014C-A 162 nt2.99□□□□□ -1.93
PUF3Q07807 YOR102WYOR102W 351 nt2.99□□□□□ -1.93
PUF3Q07807 VPH1YOR270C 2523 nt2.99□□□□□ -1.93
PUF3Q07807 TFC4YGR047C 3078 nt2.99□□□□□ -1.93
PUF3Q07807 RLM1YPL089C 2031 nt2.98□□□□□ -1.93
PUF3Q07807 YHL015W-AYHL015W-A 84 nt2.98□□□□□ -1.93
PUF3Q07807 YNL067W-BYNL067W-B 141 nt2.98□□□□□ -1.93
PUF3Q07807 YBR099CYBR099C 384 nt2.98□□□□□ -1.93
PUF3Q07807 PSK2YOL045W 3306 nt2.98□□□□□ -1.93
PUF3Q07807 MPH1YIR002C 2982 nt2.98□□□□□ -1.93
PUF3Q07807 NET1YJL076W 3570 nt2.98□□□□□ -1.93
PUF3Q07807 SIR3YLR442C 2937 nt2.98□□□□□ -1.93
PUF3Q07807 YER053C-AYER053C-A 114 nt2.97□□□□□ -1.93
PUF3Q07807 YHR071C-AYHR071C-A 321 nt2.97□□□□□ -1.93
PUF3Q07807 GRX8YLR364W 330 nt2.97□□□□□ -1.93
PUF3Q07807 PSK1YAL017W 4071 nt2.97□□□□□ -1.93 RIP-Chip
PUF3Q07807 SAK1YER129W 3429 nt2.96□□□□□ -1.94
PUF3Q07807 DSE4YNR067C 3354 nt2.96□□□□□ -1.94
PUF3Q07807 YDL025W-AYDL025W-A 105 nt2.96□□□□□ -1.94
PUF3Q07807 YOR072W-BYOR072W-B 162 nt2.96□□□□□ -1.94
PUF3Q07807 RAX2YLR084C 3663 nt2.96□□□□□ -1.94
PUF3Q07807 RIF1YBR275C 5751 nt2.95□□□□□ -1.94
PUF3Q07807 YIL082W-AYIL082W-A 4497 nt2.95□□□□□ -1.94
PUF3Q07807 TAF2YCR042C 4224 nt2.95□□□□□ -1.94
PUF3Q07807 NAB3YPL190C 2409 nt2.95□□□□□ -1.94
PUF3Q07807 VPS34YLR240W 2628 nt2.95□□□□□ -1.94
PUF3Q07807 EMC6YLL014W 327 nt2.94□□□□□ -1.94
PUF3Q07807 NPR3YHL023C 3441 nt2.94□□□□□ -1.94
PUF3Q07807 YLR149CYLR149C 2193 nt2.94□□□□□ -1.94
PUF3Q07807 POM152YMR129W 4014 nt2.94□□□□□ -1.94 RIP-Chip
PUF3Q07807 YIL142C-AYIL142C-A 333 nt2.93□□□□□ -1.94
PUF3Q07807 YBR221W-AYBR221W-A 105 nt2.93□□□□□ -1.94
PUF3Q07807 VPS35YJL154C 2835 nt2.93□□□□□ -1.94
PUF3Q07807 ELG1YOR144C 2376 nt2.93□□□□□ -1.94
PUF3Q07807 YCR095W-AYCR095W-A 159 nt2.92□□□□□ -1.94
PUF3Q07807 RGR1YLR071C 3249 nt2.92□□□□□ -1.94
PUF3Q07807 PXA2YKL188C 2562 nt2.92□□□□□ -1.94
PUF3Q07807 GRR1YJR090C 3456 nt2.91□□□□□ -1.94
PUF3Q07807 YGR067CYGR067C 2415 nt2.91□□□□□ -1.94
PUF3Q07807 CAF120YNL278W 3183 nt2.91□□□□□ -1.94
PUF3Q07807 BCK1YJL095W 4437 nt2.91□□□□□ -1.94
PUF3Q07807 YLR146W-AYLR146W-A 189 nt2.91□□□□□ -1.94
PUF3Q07807 YPR203WYPR203W 309 nt2.91□□□□□ -1.94
PUF3Q07807 JSN1YJR091C 3276 nt2.91□□□□□ -1.94
PUF3Q07807 PFF1YBR074W 2931 nt2.91□□□□□ -1.94
PUF3Q07807 CYR1YJL005W 6081 nt2.91□□□□□ -1.94
PUF3Q07807 ECM29YHL030W 5607 nt2.9□□□□□ -1.94
PUF3Q07807 YGR050CYGR050C 357 nt2.9□□□□□ -1.95
PUF3Q07807 ORC1YML065W 2745 nt2.9□□□□□ -1.95
PUF3Q07807 ESL2YKR096W 3588 nt2.9□□□□□ -1.95 RIP-Chip
PUF3Q07807 HYP2YEL034W 474 nt2.89□□□□□ -1.95
PUF3Q07807 YIL174WYIL174W 228 nt2.89□□□□□ -1.95
PUF3Q07807 YJL222W-AYJL222W-A 228 nt2.89□□□□□ -1.95
PUF3Q07807 RPB10YOR210W 213 nt2.89□□□□□ -1.95
PUF3Q07807 YBR174CYBR174C 315 nt2.89□□□□□ -1.95
PUF3Q07807 PSY2YNL201C 2577 nt2.89□□□□□ -1.95
PUF3Q07807 ESL1YIL151C 3357 nt2.89□□□□□ -1.95
PUF3Q07807 SEF1YBL066C 3447 nt2.89□□□□□ -1.95
PUF3Q07807 TOM1YDR457W 9807 nt2.88□□□□□ -1.95
PUF3Q07807 RPL20AYMR242C 519 nt2.88□□□□□ -1.95
PUF3Q07807 SPO75YLL005C 2607 nt2.88□□□□□ -1.95
PUF3Q07807 INP52YNL106C 3552 nt2.87□□□□□ -1.95
PUF3Q07807 PNC1YGL037C 651 nt2.87□□□□□ -1.95
PUF3Q07807 MOT1YPL082C 5604 nt2.87□□□□□ -1.95
PUF3Q07807 NCA2YPR155C 1851 nt2.86□□□□□ -1.95 RIP-Chip
PUF3Q07807 RTT10YPL183C 3042 nt2.86□□□□□ -1.95
PUF3Q07807 RPS22AYJL190C 393 nt2.86□□□□□ -1.95
PUF3Q07807 YOL019W-AYOL019W-A 153 nt2.86□□□□□ -1.95
PUF3Q07807 snR43snR43 209 nt2.86□□□□□ -1.95
PUF3Q07807 HAL9YOL089C 3093 nt2.86□□□□□ -1.95
PUF3Q07807 NIP100YPL174C 2607 nt2.86□□□□□ -1.95
PUF3Q07807 AXL1YPR122W 3627 nt2.85□□□□□ -1.95
PUF3Q07807 SEC7YDR170C 6030 nt2.85□□□□□ -1.95 RIP-Chip
PUF3Q07807 YDL196WYDL196W 330 nt2.85□□□□□ -1.95
PUF3Q07807 UBP11YKR098C 2154 nt2.84□□□□□ -1.95
PUF3Q07807 PAA1YDR071C 576 nt2.84□□□□□ -1.95
PUF3Q07807 tC(GCA)BtC(GCA)B 72 nt2.84□□□□□ -1.95
PUF3Q07807 tC(GCA)GtC(GCA)G 72 nt2.84□□□□□ -1.95
PUF3Q07807 tC(GCA)P1tC(GCA)P1 72 nt2.84□□□□□ -1.95
PUF3Q07807 tC(GCA)P2tC(GCA)P2 72 nt2.84□□□□□ -1.95
PUF3Q07807 YLR282CYLR282C 342 nt2.84□□□□□ -1.95
PUF3Q07807 RPS12YOR369C 432 nt2.84□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 45.4 ms