Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YDL187CYDL187C 330 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 RAD6YGL058W 519 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 snR84snR84 550 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 YPD1YDL235C 504 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 RRG1YDR065W 1098 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 RPL26BYGR034W 384 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 BIG1YHR101C 1008 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 NME1NME1 340 nt-0.49□□□□□ -2.49
TY1B-DR4Q07793 VPS52YDR484W 1926 nt-0.5□□□□□ -2.49
TY1B-DR4Q07793 SLS1YLR139C 1932 nt-0.5□□□□□ -2.49
TY1B-DR4Q07793 SBH2YER019C-A 267 nt-0.5□□□□□ -2.49
TY1B-DR4Q07793 YIR030W-AYIR030W-A 384 nt-0.5□□□□□ -2.49
TY1B-DR4Q07793 PRP42YDR235W 1635 nt-0.5□□□□□ -2.49
TY1B-DR4Q07793 OSH6YKR003W 1347 nt-0.51□□□□□ -2.49
TY1B-DR4Q07793 UPF3YGR072W 1164 nt-0.51□□□□□ -2.49
TY1B-DR4Q07793 TRS20YBR254C 528 nt-0.51□□□□□ -2.49
TY1B-DR4Q07793 MIC19YFR011C 513 nt-0.52□□□□□ -2.49
TY1B-DR4Q07793 VMA21YGR105W 234 nt-0.52□□□□□ -2.49
TY1B-DR4Q07793 CCE1YKL011C 1062 nt-0.52□□□□□ -2.49
TY1B-DR4Q07793 YDR034C-CYDR034C-C 1317 nt-0.52□□□□□ -2.49
TY1B-DR4Q07793 YGR114CYGR114C 390 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 YBR224WYBR224W 516 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 CUL3YGR003W 2235 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 NPR2YEL062W 1848 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 YDL025W-AYDL025W-A 105 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 COG7YGL005C 840 nt-0.53□□□□□ -2.49
TY1B-DR4Q07793 PTP2YOR208W 2253 nt-0.54□□□□□ -2.5
TY1B-DR4Q07793 PET111YMR257C 2403 nt-0.54□□□□□ -2.5
TY1B-DR4Q07793 TCA17YEL048C 459 nt-0.54□□□□□ -2.5
TY1B-DR4Q07793 FIG1YBR040W 897 nt-0.54□□□□□ -2.5
TY1B-DR4Q07793 MIX23YBL107C 591 nt-0.55□□□□□ -2.5
TY1B-DR4Q07793 RPS10AYOR293W 318 nt-0.55□□□□□ -2.5
TY1B-DR4Q07793 RCO1YMR075W 2055 nt-0.55□□□□□ -2.5
TY1B-DR4Q07793 YBR221W-AYBR221W-A 105 nt-0.56□□□□□ -2.5
TY1B-DR4Q07793 YFL041W-AYFL041W-A 192 nt-0.56□□□□□ -2.5
TY1B-DR4Q07793 BET5YML077W 480 nt-0.56□□□□□ -2.5
TY1B-DR4Q07793 PFK27YOL136C 1194 nt-0.56□□□□□ -2.5
TY1B-DR4Q07793 YBR206WYBR206W 324 nt-0.56□□□□□ -2.5
TY1B-DR4Q07793 EFR3YMR212C 2349 nt-0.57□□□□□ -2.5
TY1B-DR4Q07793 ECM25YJL201W 1800 nt-0.57□□□□□ -2.5
TY1B-DR4Q07793 STO1YMR125W 2586 nt-0.57□□□□□ -2.5
TY1B-DR4Q07793 YCR043CYCR043C 384 nt-0.57□□□□□ -2.5
TY1B-DR4Q07793 ERV14YGL054C 417 nt-0.57□□□□□ -2.5
TY1B-DR4Q07793 RPC25YKL144C 639 nt-0.58□□□□□ -2.5
TY1B-DR4Q07793 IZH4YOL101C 939 nt-0.58□□□□□ -2.5
TY1B-DR4Q07793 OCA6YDR067C 675 nt-0.59□□□□□ -2.5
TY1B-DR4Q07793 YOR169CYOR169C 465 nt-0.59□□□□□ -2.5
TY1B-DR4Q07793 YCR038W-AYCR038W-A 126 nt-0.6□□□□□ -2.5
TY1B-DR4Q07793 TMA20YER007C-A 546 nt-0.6□□□□□ -2.5
TY1B-DR4Q07793 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.5
TY1B-DR4Q07793 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.5
TY1B-DR4Q07793 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.5
TY1B-DR4Q07793 RFX1YLR176C 2436 nt-0.6□□□□□ -2.51
TY1B-DR4Q07793 YJL127W-AYJL127W-A 117 nt-0.6□□□□□ -2.51
TY1B-DR4Q07793 snR35snR35 204 nt-0.6□□□□□ -2.51
TY1B-DR4Q07793 ERV15YBR210W 429 nt-0.6□□□□□ -2.51
TY1B-DR4Q07793 PDE2YOR360C 1581 nt-0.61□□□□□ -2.51
TY1B-DR4Q07793 SLD5YDR489W 885 nt-0.61□□□□□ -2.51
TY1B-DR4Q07793 REF2YDR195W 1602 nt-0.63□□□□□ -2.51
TY1B-DR4Q07793 CGI121YML036W 546 nt-0.64□□□□□ -2.51
TY1B-DR4Q07793 YJR011CYJR011C 786 nt-0.64□□□□□ -2.51
TY1B-DR4Q07793 YMR173W-AYMR173W-A 1185 nt-0.64□□□□□ -2.51
TY1B-DR4Q07793 DDR48YMR173W 1293 nt-0.64□□□□□ -2.51
TY1B-DR4Q07793 DPB11YJL090C 2295 nt-0.65□□□□□ -2.51
TY1B-DR4Q07793 snR8snR8 190 nt-0.65□□□□□ -2.51
TY1B-DR4Q07793 AME1YBR211C 975 nt-0.65□□□□□ -2.51
TY1B-DR4Q07793 TIM13YGR181W 318 nt-0.66□□□□□ -2.51
TY1B-DR4Q07793 YBL068W-AYBL068W-A 237 nt-0.66□□□□□ -2.51
TY1B-DR4Q07793 SOV1YMR066W 2697 nt-0.66□□□□□ -2.52
TY1B-DR4Q07793 NOP12YOL041C 1380 nt-0.66□□□□□ -2.52
TY1B-DR4Q07793 SCW11YGL028C 1629 nt-0.66□□□□□ -2.52
TY1B-DR4Q07793 YCR022CYCR022C 345 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 snR68snR68 136 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 YJL127C-BYJL127C-B 159 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 YOR105WYOR105W 327 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 YEL073CYEL073C 324 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 YLR101CYLR101C 396 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 TAP42YMR028W 1101 nt-0.67□□□□□ -2.52
TY1B-DR4Q07793 YOR186C-AYOR186C-A 210 nt-0.68□□□□□ -2.52
TY1B-DR4Q07793 COX5BYIL111W 456 nt-0.69□□□□□ -2.52
TY1B-DR4Q07793 YAL064WYAL064W 285 nt-0.69□□□□□ -2.52
TY1B-DR4Q07793 YBL094CYBL094C 333 nt-0.69□□□□□ -2.52
TY1B-DR4Q07793 SPO77YLR341W 1434 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 PMP1YCR024C-A 123 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YLR458WYLR458W 381 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YBR223W-AYBR223W-A 120 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YFL002W-BYFL002W-B 1317 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YGR161W-AYGR161W-A 1317 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YLR410W-AYLR410W-A 1317 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YBL100W-AYBL100W-A 1317 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 YCL020WYCL020W 1317 nt-0.7□□□□□ -2.52
TY1B-DR4Q07793 RUF22RUF22 515 nt-0.71□□□□□ -2.52
TY1B-DR4Q07793 NOC3YLR002C 1992 nt-0.71□□□□□ -2.52
TY1B-DR4Q07793 PHO92YDR374C 921 nt-0.71□□□□□ -2.52
TY1B-DR4Q07793 RRT16YNL105W 429 nt-0.71□□□□□ -2.52
TY1B-DR4Q07793 YGR265WYGR265W 411 nt-0.72□□□□□ -2.52
TY1B-DR4Q07793 YHR212CYHR212C 336 nt-0.72□□□□□ -2.52
TY1B-DR4Q07793 YJR141WYJR141W 1044 nt-0.72□□□□□ -2.52
TY1B-DR4Q07793 HOT13YKL084W 351 nt-0.72□□□□□ -2.52
TY1B-DR4Q07793 YAR060CYAR060C 336 nt-0.72□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms