Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 TOM1YDR457W 9807 nt3.11□□□□□ -1.91
UFD2P54860 SPO22YIL073C 2928 nt3.11□□□□□ -1.91
UFD2P54860 VPS54YDR027C 2670 nt3.11□□□□□ -1.91
UFD2P54860 TCB2YNL087W 3537 nt3.11□□□□□ -1.91
UFD2P54860 SEC7YDR170C 6030 nt3.11□□□□□ -1.91
UFD2P54860 RSE1YML049C 4086 nt3.1□□□□□ -1.91
UFD2P54860 YNL114CYNL114C 372 nt3.1□□□□□ -1.91
UFD2P54860 YPR092WYPR092W 306 nt3.1□□□□□ -1.91
UFD2P54860 SNF5YBR289W 2718 nt3.1□□□□□ -1.91
UFD2P54860 TFC4YGR047C 3078 nt3.1□□□□□ -1.91
UFD2P54860 YKU70YMR284W 1809 nt3.09□□□□□ -1.91
UFD2P54860 YGR067CYGR067C 2415 nt3.09□□□□□ -1.91
UFD2P54860 STB4YMR019W 2850 nt3.09□□□□□ -1.91
UFD2P54860 YPP1YGR198W 2454 nt3.09□□□□□ -1.91
UFD2P54860 PHO2YDL106C 1680 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)G1tW(CCA)G1 72 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)G2tW(CCA)G2 72 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)JtW(CCA)J 72 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)KtW(CCA)K 72 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)MtW(CCA)M 72 nt3.09□□□□□ -1.91
UFD2P54860 tW(CCA)PtW(CCA)P 72 nt3.09□□□□□ -1.91
UFD2P54860 RTT10YPL183C 3042 nt3.09□□□□□ -1.91
UFD2P54860 AFI1YOR129C 2682 nt3.09□□□□□ -1.91
UFD2P54860 PFF1YBR074W 2931 nt3.09□□□□□ -1.92
UFD2P54860 MUK1YPL070W 1839 nt3.08□□□□□ -1.92
UFD2P54860 NFT1YKR103W 3657 nt3.08□□□□□ -1.92
UFD2P54860 SNC1YAL030W 354 nt3.08□□□□□ -1.92
UFD2P54860 YDR186CYDR186C 2634 nt3.08□□□□□ -1.92
UFD2P54860 YIL082W-AYIL082W-A 4497 nt3.07□□□□□ -1.92
UFD2P54860 SEC5YDR166C 2916 nt3.07□□□□□ -1.92
UFD2P54860 CRM1YGR218W 3255 nt3.07□□□□□ -1.92
UFD2P54860 SCH9YHR205W 2475 nt3.07□□□□□ -1.92
UFD2P54860 SDH6YDR379C-A 240 nt3.07□□□□□ -1.92
UFD2P54860 YOR376WYOR376W 369 nt3.07□□□□□ -1.92
UFD2P54860 YBR182C-AYBR182C-A 195 nt3.07□□□□□ -1.92
UFD2P54860 DNA2YHR164C 4569 nt3.07□□□□□ -1.92
UFD2P54860 RPH1YER169W 2391 nt3.07□□□□□ -1.92
UFD2P54860 ESL1YIL151C 3357 nt3.06□□□□□ -1.92
UFD2P54860 snR70snR70 164 nt3.06□□□□□ -1.92
UFD2P54860 PRP8YHR165C 7242 nt3.06□□□□□ -1.92
UFD2P54860 EMC6YLL014W 327 nt3.06□□□□□ -1.92
UFD2P54860 YNL097C-BYNL097C-B 123 nt3.06□□□□□ -1.92
UFD2P54860 snR43snR43 209 nt3.06□□□□□ -1.92
UFD2P54860 YEL043WYEL043W 2871 nt3.06□□□□□ -1.92
UFD2P54860 INP53YOR109W 3324 nt3.05□□□□□ -1.92
UFD2P54860 SSN2YDR443C 4263 nt3.05□□□□□ -1.92
UFD2P54860 RPL42BYHR141C 321 nt3.05□□□□□ -1.92
UFD2P54860 RPL42AYNL162W 321 nt3.05□□□□□ -1.92
UFD2P54860 INP52YNL106C 3552 nt3.05□□□□□ -1.92
UFD2P54860 AXL1YPR122W 3627 nt3.04□□□□□ -1.92
UFD2P54860 MPT5YGL178W 2580 nt3.04□□□□□ -1.92
UFD2P54860 MRP10YDL045W-A 288 nt3.04□□□□□ -1.92
UFD2P54860 snR74snR74 88 nt3.04□□□□□ -1.92
UFD2P54860 YIR030W-AYIR030W-A 384 nt3.04□□□□□ -1.92
UFD2P54860 YBL083CYBL083C 426 nt3.04□□□□□ -1.92
UFD2P54860 SWI6YLR182W 2412 nt3.04□□□□□ -1.92
UFD2P54860 RRP6YOR001W 2202 nt3.04□□□□□ -1.92
UFD2P54860 ECM29YHL030W 5607 nt3.03□□□□□ -1.92
UFD2P54860 MNL2YLR057W 2550 nt3.03□□□□□ -1.92
UFD2P54860 RPS22AYJL190C 393 nt3.03□□□□□ -1.92
UFD2P54860 INP51YIL002C 2841 nt3.03□□□□□ -1.92
UFD2P54860 IRR1YIL026C 3453 nt3.03□□□□□ -1.92
UFD2P54860 BUB1YGR188C 3066 nt3.03□□□□□ -1.92
UFD2P54860 YIL080WYIL080W 4722 nt3.02□□□□□ -1.93
UFD2P54860 YGL217CYGL217C 342 nt3.02□□□□□ -1.93
UFD2P54860 YIL174WYIL174W 228 nt3.02□□□□□ -1.93
UFD2P54860 YJL222W-AYJL222W-A 228 nt3.02□□□□□ -1.93
UFD2P54860 SWR1YDR334W 4545 nt3.01□□□□□ -1.93
UFD2P54860 CBF2YGR140W 2871 nt3.01□□□□□ -1.93
UFD2P54860 MET6YER091C 2304 nt3.01□□□□□ -1.93
UFD2P54860 YHR032W-AYHR032W-A 180 nt3.01□□□□□ -1.93
UFD2P54860 RPB10YOR210W 213 nt3.01□□□□□ -1.93
UFD2P54860 RFX1YLR176C 2436 nt3.01□□□□□ -1.93
UFD2P54860 YKU80YMR106C 1890 nt3.01□□□□□ -1.93
UFD2P54860 CDC53YDL132W 2448 nt3□□□□□ -1.93
UFD2P54860 BCK1YJL095W 4437 nt3□□□□□ -1.93
UFD2P54860 VMR1YHL035C 4779 nt3□□□□□ -1.93
UFD2P54860 snR72snR72 98 nt2.99□□□□□ -1.93
UFD2P54860 SGF11YPL047W 300 nt2.99□□□□□ -1.93
UFD2P54860 YBR131C-AYBR131C-A 90 nt2.99□□□□□ -1.93
UFD2P54860 snR46snR46 197 nt2.99□□□□□ -1.93
UFD2P54860 KAP104YBR017C 2757 nt2.99□□□□□ -1.93
UFD2P54860 MGM1YOR211C 2646 nt2.98□□□□□ -1.93
UFD2P54860 YGR050CYGR050C 357 nt2.98□□□□□ -1.93
UFD2P54860 FKS3YMR306W 5358 nt2.98□□□□□ -1.93
UFD2P54860 HOS4YIL112W 3252 nt2.98□□□□□ -1.93
UFD2P54860 PTP3YER075C 2787 nt2.98□□□□□ -1.93
UFD2P54860 SWI5YDR146C 2130 nt2.98□□□□□ -1.93
UFD2P54860 SMY2YBR172C 2223 nt2.97□□□□□ -1.93
UFD2P54860 SLH1YGR271W 5904 nt2.97□□□□□ -1.93
UFD2P54860 NIP100YPL174C 2607 nt2.97□□□□□ -1.93
UFD2P54860 NEW1YPL226W 3591 nt2.97□□□□□ -1.93
UFD2P54860 SET2YJL168C 2202 nt2.97□□□□□ -1.93
UFD2P54860 YHR073W-AYHR073W-A 177 nt2.96□□□□□ -1.94
UFD2P54860 GIS1YDR096W 2685 nt2.96□□□□□ -1.94
UFD2P54860 SEC26YDR238C 2922 nt2.96□□□□□ -1.94
UFD2P54860 SLY1YDR189W 2001 nt2.96□□□□□ -1.94
UFD2P54860 TAO3YIL129C 7131 nt2.96□□□□□ -1.94
UFD2P54860 SLM1YIL105C 2061 nt2.96□□□□□ -1.94
UFD2P54860 PDR3YBL005W 2931 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 94.5 ms