Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 YEL030C-AYEL030C-A 315 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 YAL064WYAL064W 285 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 YLR031WYLR031W 561 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 VPS52YDR484W 1926 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 RPL35AYDL191W 363 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 YDR262WYDR262W 819 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 VPS74YDR372C 1038 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 HAL9YOL089C 3093 nt-0.04□□□□□ -2.42
TY1B-JR2P47100 PXA2YKL188C 2562 nt-0.05□□□□□ -2.42
TY1B-JR2P47100 snR63snR63 255 nt-0.05□□□□□ -2.42
TY1B-JR2P47100 SDH2YLL041C 801 nt-0.05□□□□□ -2.42
TY1B-JR2P47100 YOR199WYOR199W 330 nt-0.05□□□□□ -2.42
TY1B-JR2P47100 RPB10YOR210W 213 nt-0.05□□□□□ -2.42
TY1B-JR2P47100 NPR2YEL062W 1848 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 PEP3YLR148W 2757 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 CHZ1YER030W 462 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 DLT1YMR126C 1029 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 YMR173W-AYMR173W-A 1185 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 DDR48YMR173W 1293 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 snR190snR190 190 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 NOC3YLR002C 1992 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 YOR192C-AYOR192C-A 1317 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 AIM44YPL158C 2277 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 YCR016WYCR016W 873 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 YGR219WYGR219W 342 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 SPR2YOR214C 711 nt-0.06□□□□□ -2.42
TY1B-JR2P47100 STO1YMR125W 2586 nt-0.07□□□□□ -2.42
TY1B-JR2P47100 BFR2YDR299W 1605 nt-0.07□□□□□ -2.42
TY1B-JR2P47100 RPL37AYLR185W 267 nt-0.08□□□□□ -2.42
TY1B-JR2P47100 YNL162W-AYNL162W-A 219 nt-0.08□□□□□ -2.42
TY1B-JR2P47100 NIP100YPL174C 2607 nt-0.08□□□□□ -2.42
TY1B-JR2P47100 YKL183C-AYKL183C-A 213 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 ATP18YML081C-A 180 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 SAG1YJR004C 1953 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YDR034C-CYDR034C-C 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YFL002W-BYFL002W-B 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YGR161W-AYGR161W-A 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YLR410W-AYLR410W-A 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YBL100W-AYBL100W-A 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 YCL020WYCL020W 1317 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 CHS6YJL099W 2241 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 ROX1YPR065W 1107 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 NTC20YBR188C 423 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 SWI5YDR146C 2130 nt-0.09□□□□□ -2.42
TY1B-JR2P47100 PDE2YOR360C 1581 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 MET32YDR253C 576 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 TIM8YJR135W-A 264 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 NEJ1YLR265C 1029 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 RUF22RUF22 515 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 ENV11YGR071C 2583 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 AI4Q0065 1671 nt-0.1□□□□□ -2.43
TY1B-JR2P47100 YGR265WYGR265W 411 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 IST3YIR005W 447 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 YBR051WYBR051W 351 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 NOT5YPR072W 1683 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 YBP2YGL060W 1926 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 MAM1YER106W 909 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 MFA2YNL145W 117 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 MUM2YBR057C 1101 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 SUT2YPR009W 807 nt-0.11□□□□□ -2.43
TY1B-JR2P47100 SCW11YGL028C 1629 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 SSS1YDR086C 243 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 RPC10YHR143W-A 213 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 YJL114WYJL114W 681 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 COX12YLR038C 252 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 YLR232WYLR232W 348 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 YBR076C-AYBR076C-A 267 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 DPB11YJL090C 2295 nt-0.12□□□□□ -2.43
TY1B-JR2P47100 YKE2YLR200W 345 nt-0.13□□□□□ -2.43
TY1B-JR2P47100 YJL007CYJL007C 315 nt-0.14□□□□□ -2.43
TY1B-JR2P47100 BIG1YHR101C 1008 nt-0.14□□□□□ -2.43
TY1B-JR2P47100 YOR108C-AYOR108C-A 210 nt-0.14□□□□□ -2.43
TY1B-JR2P47100 YPR153WYPR153W 423 nt-0.14□□□□□ -2.43
TY1B-JR2P47100 PRP5YBR237W 2550 nt-0.15□□□□□ -2.43
TY1B-JR2P47100 YDL009CYDL009C 324 nt-0.15□□□□□ -2.43
TY1B-JR2P47100 YOR105WYOR105W 327 nt-0.15□□□□□ -2.43
TY1B-JR2P47100 IPI3YNL182C 1668 nt-0.15□□□□□ -2.43
TY1B-JR2P47100 PET111YMR257C 2403 nt-0.15□□□□□ -2.43
TY1B-JR2P47100 SLD3YGL113W 2007 nt-0.16□□□□□ -2.43
TY1B-JR2P47100 NTF2YER009W 378 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 GEP7YGL057C 864 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 YGR164WYGR164W 336 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 RCN2YOR220W 798 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 RAD6YGL058W 519 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 SPO11YHL022C 1197 nt-0.17□□□□□ -2.44
TY1B-JR2P47100 OCA6YDR067C 675 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 RPL26BYGR034W 384 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 VMA21YGR105W 234 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 YIL134C-AYIL134C-A 204 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 YPR170CYPR170C 336 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 YBR221W-AYBR221W-A 105 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 KAR3YPR141C 2190 nt-0.18□□□□□ -2.44
TY1B-JR2P47100 FAR3YMR052W 615 nt-0.19□□□□□ -2.44
TY1B-JR2P47100 snR84snR84 550 nt-0.19□□□□□ -2.44
TY1B-JR2P47100 YDR199WYDR199W 366 nt-0.19□□□□□ -2.44
TY1B-JR2P47100 RPL26AYLR344W 384 nt-0.19□□□□□ -2.44
TY1B-JR2P47100 YBR062CYBR062C 543 nt-0.19□□□□□ -2.44
TY1B-JR2P47100 MMS4YBR098W 2076 nt-0.2□□□□□ -2.44
TY1B-JR2P47100 NOP9YJL010C 2001 nt-0.21□□□□□ -2.44
TY1B-JR2P47100 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 1766.4 ms