Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YPR002C-AYPR002C-A 198 nt2.98□□□□□ -1.93
VPS53P47061 MSB2YGR014W 3921 nt2.98□□□□□ -1.93
VPS53P47061 YPL150WYPL150W 2706 nt2.98□□□□□ -1.93
VPS53P47061 PDE2YOR360C 1581 nt2.97□□□□□ -1.93
VPS53P47061 CDC27YBL084C 2277 nt2.97□□□□□ -1.93
VPS53P47061 SMD1YGR074W 441 nt2.97□□□□□ -1.93
VPS53P47061 RRT15YLR162W-A 189 nt2.97□□□□□ -1.93
VPS53P47061 SNC2YOR327C 348 nt2.97□□□□□ -1.93
VPS53P47061 RRP12YPL012W 3687 nt2.97□□□□□ -1.93
VPS53P47061 YDR186CYDR186C 2634 nt2.97□□□□□ -1.93
VPS53P47061 MOT1YPL082C 5604 nt2.96□□□□□ -1.94
VPS53P47061 PHO2YDL106C 1680 nt2.96□□□□□ -1.94
VPS53P47061 YHR086W-AYHR086W-A 162 nt2.96□□□□□ -1.94
VPS53P47061 RPS22AYJL190C 393 nt2.96□□□□□ -1.94
VPS53P47061 VMA9YCL005W-A 222 nt2.96□□□□□ -1.94
VPS53P47061 PEX8YGR077C 1770 nt2.96□□□□□ -1.94
VPS53P47061 NOP53YPL146C 1368 nt2.96□□□□□ -1.94
VPS53P47061 CYR1YJL005W 6081 nt2.96□□□□□ -1.94
VPS53P47061 HRD3YLR207W 2502 nt2.95□□□□□ -1.94
VPS53P47061 TOM1YDR457W 9807 nt2.95□□□□□ -1.94
VPS53P47061 ESL2YKR096W 3588 nt2.95□□□□□ -1.94
VPS53P47061 SAP1YER047C 2694 nt2.95□□□□□ -1.94
VPS53P47061 MET6YER091C 2304 nt2.94□□□□□ -1.94
VPS53P47061 KSP1YHR082C 3090 nt2.94□□□□□ -1.94
VPS53P47061 FLO11YIR019C 4104 nt2.94□□□□□ -1.94
VPS53P47061 YPR089WYPR089W 2667 nt2.94□□□□□ -1.94
VPS53P47061 NOP10YHR072W-A 177 nt2.94□□□□□ -1.94
VPS53P47061 YNL097C-BYNL097C-B 123 nt2.94□□□□□ -1.94
VPS53P47061 MMS1YPR164W 4224 nt2.94□□□□□ -1.94
VPS53P47061 CFT2YLR115W 2580 nt2.94□□□□□ -1.94
VPS53P47061 MRP10YDL045W-A 288 nt2.93□□□□□ -1.94
VPS53P47061 YDR286CYDR286C 345 nt2.93□□□□□ -1.94
VPS53P47061 ECM29YHL030W 5607 nt2.92□□□□□ -1.94
VPS53P47061 PLC1YPL268W 2610 nt2.92□□□□□ -1.94
VPS53P47061 SSN2YDR443C 4263 nt2.92□□□□□ -1.94
VPS53P47061 SEC7YDR170C 6030 nt2.92□□□□□ -1.94
VPS53P47061 EMC6YLL014W 327 nt2.92□□□□□ -1.94
VPS53P47061 YPR092WYPR092W 306 nt2.92□□□□□ -1.94
VPS53P47061 PRP6YBR055C 2700 nt2.92□□□□□ -1.94
VPS53P47061 CAF120YNL278W 3183 nt2.92□□□□□ -1.94
VPS53P47061 FIR1YER032W 2631 nt2.92□□□□□ -1.94
VPS53P47061 SSQ1YLR369W 1974 nt2.92□□□□□ -1.94
VPS53P47061 EFR3YMR212C 2349 nt2.92□□□□□ -1.94
VPS53P47061 PRP8YHR165C 7242 nt2.92□□□□□ -1.94
VPS53P47061 DUG2YBR281C 2637 nt2.91□□□□□ -1.94
VPS53P47061 snR85snR85 171 nt2.91□□□□□ -1.94
VPS53P47061 YIL020C-AYIL020C-A 339 nt2.91□□□□□ -1.94
VPS53P47061 LCL1YPL056C 306 nt2.91□□□□□ -1.94
VPS53P47061 YLR149CYLR149C 2193 nt2.91□□□□□ -1.94
VPS53P47061 STE11YLR362W 2154 nt2.91□□□□□ -1.94
VPS53P47061 VPS54YDR027C 2670 nt2.91□□□□□ -1.94
VPS53P47061 SLH1YGR271W 5904 nt2.91□□□□□ -1.94
VPS53P47061 VPS34YLR240W 2628 nt2.9□□□□□ -1.94
VPS53P47061 YGL217CYGL217C 342 nt2.9□□□□□ -1.95
VPS53P47061 YOR376WYOR376W 369 nt2.9□□□□□ -1.95
VPS53P47061 SEF1YBL066C 3447 nt2.9□□□□□ -1.95
VPS53P47061 SPT21YMR179W 2277 nt2.9□□□□□ -1.95
VPS53P47061 IKI3YLR384C 4050 nt2.9□□□□□ -1.95
VPS53P47061 UTP14YML093W 2700 nt2.9□□□□□ -1.95
VPS53P47061 VPH1YOR270C 2523 nt2.89□□□□□ -1.95
VPS53P47061 snR74snR74 88 nt2.89□□□□□ -1.95
VPS53P47061 YGR164WYGR164W 336 nt2.89□□□□□ -1.95
VPS53P47061 YHR032W-AYHR032W-A 180 nt2.89□□□□□ -1.95
VPS53P47061 YIL174WYIL174W 228 nt2.89□□□□□ -1.95
VPS53P47061 YJL222W-AYJL222W-A 228 nt2.89□□□□□ -1.95
VPS53P47061 YBR182C-AYBR182C-A 195 nt2.89□□□□□ -1.95
VPS53P47061 SLN1YIL147C 3663 nt2.89□□□□□ -1.95
VPS53P47061 SEC5YDR166C 2916 nt2.89□□□□□ -1.95
VPS53P47061 BCK1YJL095W 4437 nt2.88□□□□□ -1.95
VPS53P47061 RTT10YPL183C 3042 nt2.88□□□□□ -1.95
VPS53P47061 PXA2YKL188C 2562 nt2.88□□□□□ -1.95
VPS53P47061 YBL083CYBL083C 426 nt2.88□□□□□ -1.95
VPS53P47061 YPR203WYPR203W 309 nt2.88□□□□□ -1.95
VPS53P47061 RPO41YFL036W 4056 nt2.87□□□□□ -1.95
VPS53P47061 PTP3YER075C 2787 nt2.87□□□□□ -1.95
VPS53P47061 FMP16YDR070C 282 nt2.87□□□□□ -1.95
VPS53P47061 YAL042C-AYAL042C-A 378 nt2.87□□□□□ -1.95
VPS53P47061 SUL1YBR294W 2580 nt2.87□□□□□ -1.95
VPS53P47061 GRR1YJR090C 3456 nt2.87□□□□□ -1.95
VPS53P47061 VTC3YPL019C 2508 nt2.86□□□□□ -1.95
VPS53P47061 NFT1YKR103W 3657 nt2.86□□□□□ -1.95
VPS53P47061 YIR030W-AYIR030W-A 384 nt2.86□□□□□ -1.95
VPS53P47061 snR46snR46 197 nt2.86□□□□□ -1.95
VPS53P47061 YBR184WYBR184W 1572 nt2.86□□□□□ -1.95
VPS53P47061 INP2YMR163C 2118 nt2.86□□□□□ -1.95
VPS53P47061 GCV2YMR189W 3105 nt2.86□□□□□ -1.95
VPS53P47061 RGA2YDR379W 3030 nt2.85□□□□□ -1.95
VPS53P47061 MPT5YGL178W 2580 nt2.85□□□□□ -1.95
VPS53P47061 GEA1YJR031C 4227 nt2.85□□□□□ -1.95
VPS53P47061 NUM1YDR150W 8247 nt2.85□□□□□ -1.95
VPS53P47061 MUK1YPL070W 1839 nt2.85□□□□□ -1.95
VPS53P47061 YBR131C-AYBR131C-A 90 nt2.85□□□□□ -1.95
VPS53P47061 UBP1YDL122W 2430 nt2.84□□□□□ -1.95
VPS53P47061 NUP170YBL079W 4509 nt2.84□□□□□ -1.95
VPS53P47061 YLR146W-AYLR146W-A 189 nt2.84□□□□□ -1.95
VPS53P47061 PEP3YLR148W 2757 nt2.84□□□□□ -1.95
VPS53P47061 JSN1YJR091C 3276 nt2.84□□□□□ -1.96
VPS53P47061 SRO77YBL106C 3033 nt2.83□□□□□ -1.96
VPS53P47061 COS111YBR203W 2775 nt2.83□□□□□ -1.96
VPS53P47061 COF1YLL050C 432 nt2.83□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 104.4 ms