Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 tW(CCA)G2tW(CCA)G2 72 nt2.9□□□□□ -1.95
PEX28P38848 tW(CCA)JtW(CCA)J 72 nt2.9□□□□□ -1.95
PEX28P38848 tW(CCA)KtW(CCA)K 72 nt2.9□□□□□ -1.95
PEX28P38848 tW(CCA)MtW(CCA)M 72 nt2.9□□□□□ -1.95
PEX28P38848 tW(CCA)PtW(CCA)P 72 nt2.9□□□□□ -1.95
PEX28P38848 YPR092WYPR092W 306 nt2.9□□□□□ -1.95
PEX28P38848 SWI6YLR182W 2412 nt2.9□□□□□ -1.95
PEX28P38848 SPO22YIL073C 2928 nt2.89□□□□□ -1.95
PEX28P38848 YIL169CYIL169C 2988 nt2.89□□□□□ -1.95
PEX28P38848 YNL114CYNL114C 372 nt2.89□□□□□ -1.95
PEX28P38848 YBR182C-AYBR182C-A 195 nt2.89□□□□□ -1.95
PEX28P38848 SGS1YMR190C 4344 nt2.89□□□□□ -1.95
PEX28P38848 SEC5YDR166C 2916 nt2.89□□□□□ -1.95
PEX28P38848 PFF1YBR074W 2931 nt2.89□□□□□ -1.95
PEX28P38848 PRP8YHR165C 7242 nt2.88□□□□□ -1.95
PEX28P38848 FUN30YAL019W 3396 nt2.88□□□□□ -1.95
PEX28P38848 IRR1YIL026C 3453 nt2.88□□□□□ -1.95
PEX28P38848 YSP2YDR326C 4317 nt2.88□□□□□ -1.95
PEX28P38848 YOR376WYOR376W 369 nt2.88□□□□□ -1.95
PEX28P38848 MET6YER091C 2304 nt2.88□□□□□ -1.95
PEX28P38848 RPH1YER169W 2391 nt2.88□□□□□ -1.95
PEX28P38848 PHO2YDL106C 1680 nt2.88□□□□□ -1.95
PEX28P38848 SNQ2YDR011W 4506 nt2.87□□□□□ -1.95
PEX28P38848 STB4YMR019W 2850 nt2.87□□□□□ -1.95
PEX28P38848 TFC4YGR047C 3078 nt2.87□□□□□ -1.95
PEX28P38848 MNL2YLR057W 2550 nt2.87□□□□□ -1.95
PEX28P38848 RRP6YOR001W 2202 nt2.87□□□□□ -1.95
PEX28P38848 SDH6YDR379C-A 240 nt2.87□□□□□ -1.95
PEX28P38848 YJL135WYJL135W 318 nt2.87□□□□□ -1.95
PEX28P38848 EMC6YLL014W 327 nt2.87□□□□□ -1.95
PEX28P38848 PDR3YBL005W 2931 nt2.87□□□□□ -1.95
PEX28P38848 FRE2YKL220C 2136 nt2.87□□□□□ -1.95
PEX28P38848 BUD4YJR092W 4344 nt2.87□□□□□ -1.95
PEX28P38848 NMD2YHR077C 3270 nt2.87□□□□□ -1.95
PEX28P38848 YKU70YMR284W 1809 nt2.86□□□□□ -1.95
PEX28P38848 RPL42BYHR141C 321 nt2.86□□□□□ -1.95
PEX28P38848 SNC1YAL030W 354 nt2.86□□□□□ -1.95
PEX28P38848 RPL42AYNL162W 321 nt2.86□□□□□ -1.95
PEX28P38848 INP52YNL106C 3552 nt2.85□□□□□ -1.95
PEX28P38848 PHD1YKL043W 1101 nt2.85□□□□□ -1.95
PEX28P38848 YEL043WYEL043W 2871 nt2.85□□□□□ -1.95
PEX28P38848 INP51YIL002C 2841 nt2.84□□□□□ -1.95
PEX28P38848 TCB2YNL087W 3537 nt2.84□□□□□ -1.95
PEX28P38848 RAX2YLR084C 3663 nt2.84□□□□□ -1.95
PEX28P38848 MRP10YDL045W-A 288 nt2.84□□□□□ -1.95
PEX28P38848 RPB10YOR210W 213 nt2.84□□□□□ -1.95
PEX28P38848 SLY1YDR189W 2001 nt2.84□□□□□ -1.95
PEX28P38848 YPL216WYPL216W 3309 nt2.84□□□□□ -1.96
PEX28P38848 YIR030W-AYIR030W-A 384 nt2.83□□□□□ -1.96
PEX28P38848 YNL097C-BYNL097C-B 123 nt2.83□□□□□ -1.96
PEX28P38848 YBL083CYBL083C 426 nt2.83□□□□□ -1.96
PEX28P38848 YGR067CYGR067C 2415 nt2.83□□□□□ -1.96
PEX28P38848 RFX1YLR176C 2436 nt2.83□□□□□ -1.96
PEX28P38848 FKS3YMR306W 5358 nt2.83□□□□□ -1.96
PEX28P38848 ZRG8YER033C 3231 nt2.83□□□□□ -1.96
PEX28P38848 NEW1YPL226W 3591 nt2.82□□□□□ -1.96
PEX28P38848 YDR098C-BYDR098C-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YDR210C-DYDR210C-D 5268 nt2.82□□□□□ -1.96
PEX28P38848 YDR316W-BYDR316W-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YDR365W-BYDR365W-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YER138CYER138C 5268 nt2.82□□□□□ -1.96
PEX28P38848 YER160CYER160C 5268 nt2.82□□□□□ -1.96
PEX28P38848 YGR038C-BYGR038C-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YGR161C-DYGR161C-D 5268 nt2.82□□□□□ -1.96
PEX28P38848 YJR027WYJR027W 5268 nt2.82□□□□□ -1.96
PEX28P38848 YLR157C-BYLR157C-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YML039WYML039W 5268 nt2.82□□□□□ -1.96
PEX28P38848 YML045WYML045W 5268 nt2.82□□□□□ -1.96
PEX28P38848 YMR050CYMR050C 5268 nt2.82□□□□□ -1.96
PEX28P38848 YOL103W-BYOL103W-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YBR012W-BYBR012W-B 5271 nt2.82□□□□□ -1.96
PEX28P38848 YOR142W-BYOR142W-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YPL257W-BYPL257W-B 5268 nt2.82□□□□□ -1.96
PEX28P38848 YPR158W-BYPR158W-B 5271 nt2.82□□□□□ -1.96
PEX28P38848 CHS2YBR038W 2892 nt2.82□□□□□ -1.96
PEX28P38848 DYN2YDR424C 279 nt2.82□□□□□ -1.96
PEX28P38848 RPL33AYPL143W 324 nt2.82□□□□□ -1.96
PEX28P38848 YBT1YLL048C 4986 nt2.82□□□□□ -1.96
PEX28P38848 CDC53YDL132W 2448 nt2.82□□□□□ -1.96
PEX28P38848 CBF2YGR140W 2871 nt2.82□□□□□ -1.96
PEX28P38848 MPT5YGL178W 2580 nt2.81□□□□□ -1.96
PEX28P38848 PTP3YER075C 2787 nt2.81□□□□□ -1.96
PEX28P38848 MGM1YOR211C 2646 nt2.81□□□□□ -1.96
PEX28P38848 GIS1YDR096W 2685 nt2.81□□□□□ -1.96
PEX28P38848 HOS4YIL112W 3252 nt2.81□□□□□ -1.96
PEX28P38848 REV3YPL167C 4515 nt2.8□□□□□ -1.96
PEX28P38848 SMY2YBR172C 2223 nt2.8□□□□□ -1.96
PEX28P38848 YKU80YMR106C 1890 nt2.8□□□□□ -1.96
PEX28P38848 snR74snR74 88 nt2.8□□□□□ -1.96
PEX28P38848 YGL217CYGL217C 342 nt2.8□□□□□ -1.96
PEX28P38848 YOR218CYOR218C 420 nt2.8□□□□□ -1.96
PEX28P38848 snR46snR46 197 nt2.8□□□□□ -1.96
PEX28P38848 SET2YJL168C 2202 nt2.8□□□□□ -1.96
PEX28P38848 STE11YLR362W 2154 nt2.79□□□□□ -1.96
PEX28P38848 SWI5YDR146C 2130 nt2.79□□□□□ -1.96
PEX28P38848 YGR050CYGR050C 357 nt2.79□□□□□ -1.96
PEX28P38848 SGF11YPL047W 300 nt2.79□□□□□ -1.96
PEX28P38848 YPR203WYPR203W 309 nt2.79□□□□□ -1.96
PEX28P38848 SLM1YIL105C 2061 nt2.79□□□□□ -1.96
PEX28P38848 SLN1YIL147C 3663 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms