Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 PHO92YDR374C 921 nt-0.45□□□□□ -2.48
VMR1P38735 MRPL25YGR076C 474 nt-0.46□□□□□ -2.48
VMR1P38735 RPC25YKL144C 639 nt-0.46□□□□□ -2.48
VMR1P38735 RPS27AYKL156W 249 nt-0.46□□□□□ -2.48
VMR1P38735 YOR282WYOR282W 321 nt-0.46□□□□□ -2.48
VMR1P38735 YBR221W-AYBR221W-A 105 nt-0.46□□□□□ -2.48
VMR1P38735 YBR224WYBR224W 516 nt-0.46□□□□□ -2.48
VMR1P38735 BFR2YDR299W 1605 nt-0.46□□□□□ -2.48
VMR1P38735 TMA20YER007C-A 546 nt-0.47□□□□□ -2.48
VMR1P38735 RPL26BYGR034W 384 nt-0.47□□□□□ -2.48
VMR1P38735 YBR071WYBR071W 636 nt-0.47□□□□□ -2.48
VMR1P38735 snR68snR68 136 nt-0.48□□□□□ -2.49
VMR1P38735 IZH4YOL101C 939 nt-0.48□□□□□ -2.49
VMR1P38735 YPL225WYPL225W 441 nt-0.48□□□□□ -2.49
VMR1P38735 BIG1YHR101C 1008 nt-0.49□□□□□ -2.49
VMR1P38735 YHR212CYHR212C 336 nt-0.49□□□□□ -2.49
VMR1P38735 YAR060CYAR060C 336 nt-0.49□□□□□ -2.49
VMR1P38735 STO1YMR125W 2586 nt-0.5□□□□□ -2.49
VMR1P38735 PRP42YDR235W 1635 nt-0.5□□□□□ -2.49
VMR1P38735 snR84snR84 550 nt-0.5□□□□□ -2.49
VMR1P38735 NTF2YER009W 378 nt-0.5□□□□□ -2.49
VMR1P38735 NPR2YEL062W 1848 nt-0.51□□□□□ -2.49
VMR1P38735 YNR077CYNR077C 255 nt-0.51□□□□□ -2.49
VMR1P38735 GRX8YLR364W 330 nt-0.52□□□□□ -2.49
VMR1P38735 CGI121YML036W 546 nt-0.52□□□□□ -2.49
VMR1P38735 PET111YMR257C 2403 nt-0.52□□□□□ -2.49
VMR1P38735 PDE2YOR360C 1581 nt-0.52□□□□□ -2.49
VMR1P38735 OCA6YDR067C 675 nt-0.53□□□□□ -2.49
VMR1P38735 YDR210WYDR210W 228 nt-0.53□□□□□ -2.49
VMR1P38735 VMA21YGR105W 234 nt-0.53□□□□□ -2.49
VMR1P38735 YBL094CYBL094C 333 nt-0.53□□□□□ -2.49
VMR1P38735 DPB11YJL090C 2295 nt-0.54□□□□□ -2.5
VMR1P38735 AI3Q0060 1248 nt-0.54□□□□□ -2.5
VMR1P38735 TAP42YMR028W 1101 nt-0.54□□□□□ -2.5
VMR1P38735 YJL127C-BYJL127C-B 159 nt-0.56□□□□□ -2.5
VMR1P38735 YMR173W-AYMR173W-A 1185 nt-0.56□□□□□ -2.5
VMR1P38735 DDR48YMR173W 1293 nt-0.56□□□□□ -2.5
VMR1P38735 AME1YBR211C 975 nt-0.56□□□□□ -2.5
VMR1P38735 YHL009W-BYHL009W-B 5409 nt-0.56□□□□□ -2.5
VMR1P38735 FUS2YMR232W 2034 nt-0.57□□□□□ -2.5
VMR1P38735 MFA1YDR461W 111 nt-0.57□□□□□ -2.5
VMR1P38735 SBH2YER019C-A 267 nt-0.57□□□□□ -2.5
VMR1P38735 YLR458WYLR458W 381 nt-0.57□□□□□ -2.5
VMR1P38735 SEC10YLR166C 2616 nt-0.57□□□□□ -2.5
VMR1P38735 NPC2YDL046W 522 nt-0.57□□□□□ -2.5
VMR1P38735 EMC4YGL231C 573 nt-0.57□□□□□ -2.5
VMR1P38735 YNL089CYNL089C 477 nt-0.57□□□□□ -2.5
VMR1P38735 RCO1YMR075W 2055 nt-0.58□□□□□ -2.5
VMR1P38735 RAD61YDR014W 1944 nt-0.58□□□□□ -2.5
VMR1P38735 YOR105WYOR105W 327 nt-0.58□□□□□ -2.5
VMR1P38735 YDR034C-CYDR034C-C 1317 nt-0.58□□□□□ -2.5
VMR1P38735 YDR262WYDR262W 819 nt-0.59□□□□□ -2.5
VMR1P38735 YGR265WYGR265W 411 nt-0.59□□□□□ -2.5
VMR1P38735 YBR062CYBR062C 543 nt-0.59□□□□□ -2.5
VMR1P38735 YDL187CYDL187C 330 nt-0.6□□□□□ -2.51
VMR1P38735 YAL064WYAL064W 285 nt-0.6□□□□□ -2.51
VMR1P38735 YBL068W-AYBL068W-A 237 nt-0.6□□□□□ -2.51
VMR1P38735 YOR169CYOR169C 465 nt-0.6□□□□□ -2.51
VMR1P38735 TRS20YBR254C 528 nt-0.6□□□□□ -2.51
VMR1P38735 RRT16YNL105W 429 nt-0.61□□□□□ -2.51
VMR1P38735 YPL197CYPL197C 414 nt-0.61□□□□□ -2.51
VMR1P38735 AIM44YPL158C 2277 nt-0.61□□□□□ -2.51
VMR1P38735 SLD5YDR489W 885 nt-0.62□□□□□ -2.51
VMR1P38735 YOL024WYOL024W 519 nt-0.62□□□□□ -2.51
VMR1P38735 EFR3YMR212C 2349 nt-0.62□□□□□ -2.51
VMR1P38735 NOC3YLR002C 1992 nt-0.62□□□□□ -2.51
VMR1P38735 YFL002W-BYFL002W-B 1317 nt-0.62□□□□□ -2.51
VMR1P38735 YGR161W-AYGR161W-A 1317 nt-0.62□□□□□ -2.51
VMR1P38735 YLR410W-AYLR410W-A 1317 nt-0.62□□□□□ -2.51
VMR1P38735 YBL100W-AYBL100W-A 1317 nt-0.62□□□□□ -2.51
VMR1P38735 YCL020WYCL020W 1317 nt-0.62□□□□□ -2.51
VMR1P38735 RAD6YGL058W 519 nt-0.62□□□□□ -2.51
VMR1P38735 YEL010WYEL010W 351 nt-0.63□□□□□ -2.51
VMR1P38735 COX6YHR051W 447 nt-0.64□□□□□ -2.51
VMR1P38735 RUF22RUF22 515 nt-0.64□□□□□ -2.51
VMR1P38735 PEX15YOL044W 1152 nt-0.64□□□□□ -2.51
VMR1P38735 MVB12YGR206W 306 nt-0.65□□□□□ -2.51
VMR1P38735 PMP1YCR024C-A 123 nt-0.66□□□□□ -2.51
VMR1P38735 YJL127W-AYJL127W-A 117 nt-0.66□□□□□ -2.51
VMR1P38735 CCE1YKL011C 1062 nt-0.66□□□□□ -2.51
VMR1P38735 NEJ1YLR265C 1029 nt-0.66□□□□□ -2.52
VMR1P38735 YFL041W-AYFL041W-A 192 nt-0.67□□□□□ -2.52
VMR1P38735 GPX2YBR244W 489 nt-0.67□□□□□ -2.52
VMR1P38735 YKL183C-AYKL183C-A 213 nt-0.68□□□□□ -2.52
VMR1P38735 SPR2YOR214C 711 nt-0.68□□□□□ -2.52
VMR1P38735 NTC20YBR188C 423 nt-0.68□□□□□ -2.52
VMR1P38735 YCR090CYCR090C 549 nt-0.69□□□□□ -2.52
VMR1P38735 MIC19YFR011C 513 nt-0.69□□□□□ -2.52
VMR1P38735 YIR030W-AYIR030W-A 384 nt-0.69□□□□□ -2.52
VMR1P38735 snR8snR8 190 nt-0.7□□□□□ -2.52
VMR1P38735 YJR011CYJR011C 786 nt-0.7□□□□□ -2.52
VMR1P38735 YBR206WYBR206W 324 nt-0.7□□□□□ -2.52
VMR1P38735 NME1NME1 340 nt-0.7□□□□□ -2.52
VMR1P38735 YOR186C-AYOR186C-A 210 nt-0.7□□□□□ -2.52
VMR1P38735 YPL080CYPL080C 327 nt-0.71□□□□□ -2.52
VMR1P38735 CHZ1YER030W 462 nt-0.72□□□□□ -2.52
VMR1P38735 SOV1YMR066W 2697 nt-0.73□□□□□ -2.53
VMR1P38735 NOT5YPR072W 1683 nt-0.73□□□□□ -2.53
VMR1P38735 YEL073CYEL073C 324 nt-0.73□□□□□ -2.53
VMR1P38735 RPM2YML091C 3609 nt-0.73□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 63.9 ms