Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	YBR032W	YBR032W	303 nt		1.44	□□□□□ -2.18
ATG12	P38316	VPS52	YDR484W	1926 nt		1.44	□□□□□ -2.18
ATG12	P38316	CCH1	YGR217W	6120 nt		1.44	□□□□□ -2.18
ATG12	P38316	SAC3	YDR159W	3906 nt		1.44	□□□□□ -2.18
ATG12	P38316	YER087C-A	YER087C-A	552 nt		1.43	□□□□□ -2.18
ATG12	P38316	AGA2	YGL032C	264 nt		1.43	□□□□□ -2.18
ATG12	P38316	LSO2	YGR169C-A	279 nt		1.43	□□□□□ -2.18
ATG12	P38316	tT(UGU)Q1	tT(UGU)Q1	76 nt		1.43	□□□□□ -2.18
ATG12	P38316	NFU1	YKL040C	771 nt		1.43	□□□□□ -2.18
ATG12	P38316	YBL083C	YBL083C	426 nt		1.43	□□□□□ -2.18
ATG12	P38316	TSC3	YBR058C-A	243 nt		1.43	□□□□□ -2.18
ATG12	P38316	YPR039W	YPR039W	336 nt		1.43	□□□□□ -2.18
ATG12	P38316	PPN1	YDR452W	2025 nt		1.43	□□□□□ -2.18
ATG12	P38316	SWT1	YOR166C	1377 nt		1.43	□□□□□ -2.18
ATG12	P38316	CTR9	YOL145C	3234 nt		1.43	□□□□□ -2.18
ATG12	P38316	YSW1	YBR148W	1830 nt		1.43	□□□□□ -2.18
ATG12	P38316	PEP3	YLR148W	2757 nt		1.42	□□□□□ -2.18
ATG12	P38316	COX1	Q0045	1605 nt		1.42	□□□□□ -2.18
ATG12	P38316	YCR043C	YCR043C	384 nt		1.42	□□□□□ -2.18
ATG12	P38316	SWF1	YDR126W	1011 nt		1.42	□□□□□ -2.18
ATG12	P38316	YDR269C	YDR269C	324 nt		1.42	□□□□□ -2.18
ATG12	P38316	STF2	YGR008C	255 nt		1.42	□□□□□ -2.18
ATG12	P38316	YHR125W	YHR125W	306 nt		1.42	□□□□□ -2.18
ATG12	P38316	UBC7	YMR022W	498 nt		1.42	□□□□□ -2.18
ATG12	P38316	YNL324W	YNL324W	396 nt		1.42	□□□□□ -2.18
ATG12	P38316	YBR224W	YBR224W	516 nt		1.42	□□□□□ -2.18
ATG12	P38316	snR54	snR54	86 nt		1.42	□□□□□ -2.18
ATG12	P38316	SPC98	YNL126W	2541 nt		1.42	□□□□□ -2.18
ATG12	P38316	YOR019W	YOR019W	2193 nt		1.42	□□□□□ -2.18
ATG12	P38316	IML1	YJR138W	4755 nt		1.42	□□□□□ -2.18
ATG12	P38316	FRK1	YPL141C	2598 nt		1.42	□□□□□ -2.18
ATG12	P38316	YGR250C	YGR250C	2346 nt		1.41	□□□□□ -2.18
ATG12	P38316	YER006C-A	YER006C-A	318 nt		1.41	□□□□□ -2.18
ATG12	P38316	YLR154W-F	YLR154W-F	141 nt		1.41	□□□□□ -2.18
ATG12	P38316	snR13	snR13	124 nt		1.41	□□□□□ -2.18
ATG12	P38316	snR56	snR56	88 nt		1.4	□□□□□ -2.19
ATG12	P38316	YER088C-A	YER088C-A	324 nt		1.4	□□□□□ -2.19
ATG12	P38316	YKL183C-A	YKL183C-A	213 nt		1.4	□□□□□ -2.19
ATG12	P38316	TRX1	YLR043C	312 nt		1.4	□□□□□ -2.19
ATG12	P38316	ZEO1	YOL109W	342 nt		1.4	□□□□□ -2.19
ATG12	P38316	YOL159C	YOL159C	516 nt		1.4	□□□□□ -2.19
ATG12	P38316	YBR076C-A	YBR076C-A	267 nt		1.4	□□□□□ -2.19
ATG12	P38316	YBR121C-A	YBR121C-A	159 nt		1.4	□□□□□ -2.19
ATG12	P38316	MSS11	YMR164C	2277 nt		1.4	□□□□□ -2.19
ATG12	P38316	YBR184W	YBR184W	1572 nt		1.39	□□□□□ -2.19
ATG12	P38316	snR79	snR79	84 nt		1.39	□□□□□ -2.19
ATG12	P38316	YDR157W	YDR157W	402 nt		1.39	□□□□□ -2.19
ATG12	P38316	YHR138C	YHR138C	345 nt		1.39	□□□□□ -2.19
ATG12	P38316	YML003W	YML003W	873 nt		1.39	□□□□□ -2.19
ATG12	P38316	HUG1	YML058W-A	207 nt		1.39	□□□□□ -2.19
ATG12	P38316	YPL261C	YPL261C	309 nt		1.39	□□□□□ -2.19
ATG12	P38316	SPO24	YPR036W-A	204 nt		1.39	□□□□□ -2.19
ATG12	P38316	SLM6	YBR266C	453 nt		1.39	□□□□□ -2.19
ATG12	P38316	PET127	YOR017W	2403 nt		1.39	□□□□□ -2.19
ATG12	P38316	SPO23	YBR250W	1572 nt		1.38	□□□□□ -2.19
ATG12	P38316	SKI3	YPR189W	4299 nt		1.38	□□□□□ -2.19
ATG12	P38316	CDC24	YAL041W	2565 nt		1.38	□□□□□ -2.19
ATG12	P38316	CBS1	YDL069C	690 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)E1	tH(GUG)E1	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)E2	tH(GUG)E2	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)G1	tH(GUG)G1	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	YER023C-A	YER023C-A	213 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)G2	tH(GUG)G2	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)H	tH(GUG)H	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)K	tH(GUG)K	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	tH(GUG)M	tH(GUG)M	72 nt		1.38	□□□□□ -2.19
ATG12	P38316	YLR334C	YLR334C	381 nt		1.38	□□□□□ -2.19
ATG12	P38316	FMP23	YBR047W	528 nt		1.38	□□□□□ -2.19
ATG12	P38316	YPR146C	YPR146C	330 nt		1.38	□□□□□ -2.19
ATG12	P38316	RPL31A	YDL075W	342 nt		1.37	□□□□□ -2.19
ATG12	P38316	RTT102	YGR275W	474 nt		1.37	□□□□□ -2.19
ATG12	P38316	YLR434C	YLR434C	384 nt		1.37	□□□□□ -2.19
ATG12	P38316	CGI121	YML036W	546 nt		1.37	□□□□□ -2.19
ATG12	P38316	YMR230W-A	YMR230W-A	189 nt		1.37	□□□□□ -2.19
ATG12	P38316	YBR285W	YBR285W	435 nt		1.37	□□□□□ -2.19
ATG12	P38316	ATG31	YDR022C	591 nt		1.36	□□□□□ -2.19
ATG12	P38316	GIM4	YEL003W	336 nt		1.36	□□□□□ -2.19
ATG12	P38316	tR(ACG)Q2	tR(ACG)Q2	74 nt		1.36	□□□□□ -2.19
ATG12	P38316	MCM22	YJR135C	720 nt		1.36	□□□□□ -2.19
ATG12	P38316	HMI1	YOL095C	2121 nt		1.36	□□□□□ -2.19
ATG12	P38316	ADR1	YDR216W	3972 nt		1.35	□□□□□ -2.19
ATG12	P38316	SDH7	YDR511W	402 nt		1.35	□□□□□ -2.19
ATG12	P38316	YHR175W-A	YHR175W-A	150 nt		1.35	□□□□□ -2.19
ATG12	P38316	YHR214W-A	YHR214W-A	486 nt		1.35	□□□□□ -2.19
ATG12	P38316	URM1	YIL008W	300 nt		1.35	□□□□□ -2.19
ATG12	P38316	YAR068W	YAR068W	486 nt		1.35	□□□□□ -2.19
ATG12	P38316	MKT1	YNL085W	2493 nt		1.35	□□□□□ -2.19
ATG12	P38316	HIR3	YJR140C	4947 nt		1.35	□□□□□ -2.19
ATG12	P38316	MSC6	YOR354C	2079 nt		1.35	□□□□□ -2.19
ATG12	P38316	RLM1	YPL089C	2031 nt		1.34	□□□□□ -2.19
ATG12	P38316	WIP1	YDR374W-A	270 nt		1.34	□□□□□ -2.19
ATG12	P38316	YLR287C	YLR287C	1068 nt		1.34	□□□□□ -2.19
ATG12	P38316	YBL073W	YBL073W	312 nt		1.34	□□□□□ -2.19
ATG12	P38316	PIK1	YNL267W	3201 nt		1.34	□□□□□ -2.2
ATG12	P38316	SXM1	YDR395W	2835 nt		1.34	□□□□□ -2.2
ATG12	P38316	CDC25	YLR310C	4770 nt		1.33	□□□□□ -2.2
ATG12	P38316	YER137W-A	YER137W-A	306 nt		1.33	□□□□□ -2.2
ATG12	P38316	HCH1	YNL281W	462 nt		1.33	□□□□□ -2.2
ATG12	P38316	ERP4	YOR016C	624 nt		1.33	□□□□□ -2.2
ATG12	P38316	MAK10	YEL053C	2202 nt		1.32	□□□□□ -2.2

Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms