Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YER039C-AYER039C-A 219 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)DtK(UUU)D 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)G1tK(UUU)G1 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)G2tK(UUU)G2 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)KtK(UUU)K 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)LtK(UUU)L 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)OtK(UUU)O 73 nt2.81□□□□□ -1.96
PUB1P32588 tK(UUU)PtK(UUU)P 73 nt2.81□□□□□ -1.96
PUB1P32588 DYN1YKR054C 12279 nt2.81□□□□□ -1.96 RIP-Chip
PUB1P32588 FIG4YNL325C 2640 nt2.8□□□□□ -1.96
PUB1P32588 SPC98YNL126W 2541 nt2.8□□□□□ -1.96
PUB1P32588 NOP4YPL043W 2058 nt2.8□□□□□ -1.96
PUB1P32588 NOC3YLR002C 1992 nt2.8□□□□□ -1.96
PUB1P32588 RPL33AYPL143W 324 nt2.8□□□□□ -1.96
PUB1P32588 VPS35YJL154C 2835 nt2.8□□□□□ -1.96
PUB1P32588 RPN1YHR027C 2982 nt2.79□□□□□ -1.96
PUB1P32588 SOK1YDR006C 2706 nt2.79□□□□□ -1.96 RIP-Chip
PUB1P32588 ATG13YPR185W 2217 nt2.79□□□□□ -1.96
PUB1P32588 STE6YKL209C 3873 nt2.79□□□□□ -1.96
PUB1P32588 tQ(UUG)BtQ(UUG)B 72 nt2.79□□□□□ -1.96
PUB1P32588 YLR146W-AYLR146W-A 189 nt2.79□□□□□ -1.96
PUB1P32588 YCL046WYCL046W 324 nt2.79□□□□□ -1.96
PUB1P32588 RPN2YIL075C 2838 nt2.78□□□□□ -1.96
PUB1P32588 BOI1YBL085W 2943 nt2.78□□□□□ -1.96
PUB1P32588 SOM1YEL059C-A 225 nt2.78□□□□□ -1.96
PUB1P32588 YBR206WYBR206W 324 nt2.78□□□□□ -1.96
PUB1P32588 HOS4YIL112W 3252 nt2.78□□□□□ -1.96 RIP-Chip
PUB1P32588 SAK1YER129W 3429 nt2.78□□□□□ -1.96
PUB1P32588 YBT1YLL048C 4986 nt2.78□□□□□ -1.97
PUB1P32588 NIP100YPL174C 2607 nt2.77□□□□□ -1.97
PUB1P32588 SEF1YBL066C 3447 nt2.77□□□□□ -1.97
PUB1P32588 MDM1YML104C 3384 nt2.77□□□□□ -1.97
PUB1P32588 RPL23BYER117W 414 nt2.77□□□□□ -1.97
PUB1P32588 SQS1YNL224C 2304 nt2.77□□□□□ -1.97
PUB1P32588 AI2Q0055 2565 nt2.77□□□□□ -1.97
PUB1P32588 RPA190YOR341W 4995 nt2.77□□□□□ -1.97
PUB1P32588 PAU3YCR104W 375 nt2.76□□□□□ -1.97
PUB1P32588 YDL118WYDL118W 381 nt2.76□□□□□ -1.97
PUB1P32588 RIF1YBR275C 5751 nt2.76□□□□□ -1.97
PUB1P32588 CTF4YPR135W 2784 nt2.76□□□□□ -1.97
PUB1P32588 MSC6YOR354C 2079 nt2.75□□□□□ -1.97
PUB1P32588 GIS1YDR096W 2685 nt2.75□□□□□ -1.97 RIP-Chip
PUB1P32588 YBL012CYBL012C 402 nt2.75□□□□□ -1.97
PUB1P32588 YDR210W-BYDR210W-B 5313 nt2.75□□□□□ -1.97
PUB1P32588 YDR261W-BYDR261W-B 5313 nt2.75□□□□□ -1.97
PUB1P32588 YFL002W-AYFL002W-A 5313 nt2.75□□□□□ -1.97
PUB1P32588 YGR161W-BYGR161W-B 5313 nt2.75□□□□□ -1.97
PUB1P32588 YLR410W-BYLR410W-B 5313 nt2.75□□□□□ -1.97
PUB1P32588 YCL019WYCL019W 5313 nt2.75□□□□□ -1.97
PUB1P32588 FLO1YAR050W 4614 nt2.75□□□□□ -1.97 RIP-Chip
PUB1P32588 NMD2YHR077C 3270 nt2.74□□□□□ -1.97
PUB1P32588 PMR1YGL167C 2853 nt2.74□□□□□ -1.97 RIP-Chip
PUB1P32588 RPL42BYHR141C 321 nt2.74□□□□□ -1.97
PUB1P32588 YJL120WYJL120W 324 nt2.74□□□□□ -1.97
PUB1P32588 RPS25BYLR333C 327 nt2.74□□□□□ -1.97
PUB1P32588 PHO81YGR233C 3537 nt2.74□□□□□ -1.97
PUB1P32588 YOR019WYOR019W 2193 nt2.74□□□□□ -1.97
PUB1P32588 RRP12YPL012W 3687 nt2.74□□□□□ -1.97
PUB1P32588 ORC1YML065W 2745 nt2.74□□□□□ -1.97
PUB1P32588 UBP14YBR058C 2346 nt2.74□□□□□ -1.97
PUB1P32588 NPR3YHL023C 3441 nt2.74□□□□□ -1.97
PUB1P32588 FUN30YAL019W 3396 nt2.74□□□□□ -1.97
PUB1P32588 snR43snR43 209 nt2.73□□□□□ -1.97
PUB1P32588 AIM44YPL158C 2277 nt2.73□□□□□ -1.97
PUB1P32588 SRP14YDL092W 441 nt2.72□□□□□ -1.97
PUB1P32588 YHR032W-AYHR032W-A 180 nt2.72□□□□□ -1.97
PUB1P32588 RPS12YOR369C 432 nt2.72□□□□□ -1.97
PUB1P32588 CHS3YBR023C 3498 nt2.72□□□□□ -1.97
PUB1P32588 SWI6YLR182W 2412 nt2.71□□□□□ -1.98
PUB1P32588 PBY1YBR094W 2262 nt2.71□□□□□ -1.98
PUB1P32588 RCY1YJL204C 2523 nt2.71□□□□□ -1.98
PUB1P32588 VPS3YDR495C 3036 nt2.71□□□□□ -1.98
PUB1P32588 YDL242WYDL242W 354 nt2.71□□□□□ -1.98
PUB1P32588 YIL134C-AYIL134C-A 204 nt2.71□□□□□ -1.98
PUB1P32588 RPH1YER169W 2391 nt2.71□□□□□ -1.98
PUB1P32588 MET5YJR137C 4329 nt2.7□□□□□ -1.98 RIP-Chip
PUB1P32588 MYO5YMR109W 3660 nt2.7□□□□□ -1.98
PUB1P32588 RFX1YLR176C 2436 nt2.7□□□□□ -1.98
PUB1P32588 YCR043CYCR043C 384 nt2.7□□□□□ -1.98 RIP-Chip
PUB1P32588 RPL31AYDL075W 342 nt2.7□□□□□ -1.98
PUB1P32588 tF(GAA)DtF(GAA)D 73 nt2.7□□□□□ -1.98
PUB1P32588 tF(GAA)NtF(GAA)N 73 nt2.7□□□□□ -1.98
PUB1P32588 BPT1YLL015W 4680 nt2.7□□□□□ -1.98
PUB1P32588 UBP11YKR098C 2154 nt2.7□□□□□ -1.98
PUB1P32588 MNE1YOR350C 1992 nt2.69□□□□□ -1.98 RIP-Chip
PUB1P32588 DIA2YOR080W 2199 nt2.69□□□□□ -1.98
PUB1P32588 YCR087C-AYCR087C-A 462 nt2.69□□□□□ -1.98
PUB1P32588 RPL42AYNL162W 321 nt2.69□□□□□ -1.98
PUB1P32588 YNL144CYNL144C 2223 nt2.69□□□□□ -1.98
PUB1P32588 SMY2YBR172C 2223 nt2.68□□□□□ -1.98
PUB1P32588 YHR073W-AYHR073W-A 177 nt2.68□□□□□ -1.98
PUB1P32588 YNL114CYNL114C 372 nt2.68□□□□□ -1.98
PUB1P32588 TFC4YGR047C 3078 nt2.68□□□□□ -1.98
PUB1P32588 EPL1YFL024C 2499 nt2.67□□□□□ -1.98
PUB1P32588 STF2YGR008C 255 nt2.67□□□□□ -1.98
PUB1P32588 RPS28BYLR264W 204 nt2.67□□□□□ -1.98 RIP-Chip
PUB1P32588 TOM1YDR457W 9807 nt2.67□□□□□ -1.98 RIP-Chip
PUB1P32588 SNF5YBR289W 2718 nt2.67□□□□□ -1.98
PUB1P32588 SMY1YKL079W 1971 nt2.67□□□□□ -1.98
PUB1P32588 STE23YLR389C 3084 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms