Protein–RNA interactions for Protein: P18899

DDR48, Stress protein DDR48, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDR48P18899 YDL206WYDL206W 2289 nt0.5□□□□□ -2.33
DDR48P18899 SRP14YDL092W 441 nt0.5□□□□□ -2.33
DDR48P18899 IRC2YDR112W 309 nt0.5□□□□□ -2.33
DDR48P18899 SMB1YER029C 591 nt0.5□□□□□ -2.33
DDR48P18899 MXR1YER042W 555 nt0.5□□□□□ -2.33
DDR48P18899 LOC1YFR001W 615 nt0.5□□□□□ -2.33
DDR48P18899 UTP10YJL109C 5310 nt0.5□□□□□ -2.33
DDR48P18899 YCS4YLR272C 3531 nt0.49□□□□□ -2.33
DDR48P18899 ATP20YPR020W 348 nt0.49□□□□□ -2.33
DDR48P18899 YJR003CYJR003C 1560 nt0.49□□□□□ -2.33
DDR48P18899 HTB1YDR224C 396 nt0.48□□□□□ -2.33
DDR48P18899 YHR050W-AYHR050W-A 171 nt0.48□□□□□ -2.33
DDR48P18899 CMS1YLR003C 876 nt0.48□□□□□ -2.33
DDR48P18899 NUT2YPR168W 474 nt0.48□□□□□ -2.33
DDR48P18899 IPI3YNL182C 1668 nt0.48□□□□□ -2.33
DDR48P18899 SAG1YJR004C 1953 nt0.48□□□□□ -2.33
DDR48P18899 SWI5YDR146C 2130 nt0.47□□□□□ -2.33
DDR48P18899 NUT1YGL151W 3399 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)BtF(GAA)B 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)FtF(GAA)F 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)GtF(GAA)G 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)H1tF(GAA)H1 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)H2tF(GAA)H2 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)MtF(GAA)M 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)P1tF(GAA)P1 73 nt0.47□□□□□ -2.33
DDR48P18899 tF(GAA)P2tF(GAA)P2 73 nt0.47□□□□□ -2.33
DDR48P18899 TDA2YER071C 381 nt0.47□□□□□ -2.33
DDR48P18899 YGL109WYGL109W 324 nt0.47□□□□□ -2.33
DDR48P18899 YGR045CYGR045C 363 nt0.47□□□□□ -2.33
DDR48P18899 POL32YJR043C 1053 nt0.47□□□□□ -2.33
DDR48P18899 SET3YKR029C 2256 nt0.47□□□□□ -2.33
DDR48P18899 FIG4YNL325C 2640 nt0.46□□□□□ -2.34
DDR48P18899 COX3Q0275 810 nt0.46□□□□□ -2.34
DDR48P18899 NUP157YER105C 4176 nt0.46□□□□□ -2.34
DDR48P18899 YML002WYML002W 2214 nt0.45□□□□□ -2.34
DDR48P18899 COG4YPR105C 2586 nt0.45□□□□□ -2.34
DDR48P18899 PIG1YLR273C 1947 nt0.45□□□□□ -2.34
DDR48P18899 YDR003W-AYDR003W-A 123 nt0.45□□□□□ -2.34
DDR48P18899 BMT5YIL096C 1011 nt0.45□□□□□ -2.34
DDR48P18899 PHS1YJL097W 654 nt0.45□□□□□ -2.34
DDR48P18899 HIT1YJR055W 495 nt0.45□□□□□ -2.34
DDR48P18899 YBL029C-AYBL029C-A 285 nt0.45□□□□□ -2.34
DDR48P18899 IES4YOR189W 351 nt0.45□□□□□ -2.34
DDR48P18899 YOR364WYOR364W 369 nt0.45□□□□□ -2.34
DDR48P18899 YOP1YPR028W 543 nt0.45□□□□□ -2.34
DDR48P18899 STO1YMR125W 2586 nt0.45□□□□□ -2.34
DDR48P18899 RKR1YMR247C 4689 nt0.44□□□□□ -2.34
DDR48P18899 YDL196WYDL196W 330 nt0.44□□□□□ -2.34
DDR48P18899 NHP2YDL208W 471 nt0.44□□□□□ -2.34
DDR48P18899 YIL142C-AYIL142C-A 333 nt0.44□□□□□ -2.34
DDR48P18899 YKL145W-AYKL145W-A 93 nt0.44□□□□□ -2.34
DDR48P18899 CMC4YMR194C-B 222 nt0.44□□□□□ -2.34
DDR48P18899 YBL068W-AYBL068W-A 237 nt0.44□□□□□ -2.34
DDR48P18899 YOL106WYOL106W 354 nt0.44□□□□□ -2.34
DDR48P18899 YOR032W-AYOR032W-A 201 nt0.44□□□□□ -2.34
DDR48P18899 YCK3YER123W 1575 nt0.44□□□□□ -2.34
DDR48P18899 RRI2YOL117W 1938 nt0.44□□□□□ -2.34
DDR48P18899 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
DDR48P18899 VPS52YDR484W 1926 nt0.43□□□□□ -2.34
DDR48P18899 snR79snR79 84 nt0.43□□□□□ -2.34
DDR48P18899 SWF1YDR126W 1011 nt0.43□□□□□ -2.34
DDR48P18899 YER087C-AYER087C-A 552 nt0.43□□□□□ -2.34
DDR48P18899 ALG13YGL047W 609 nt0.43□□□□□ -2.34
DDR48P18899 PAU12YGR294W 363 nt0.43□□□□□ -2.34
DDR48P18899 RPL38YLR325C 237 nt0.43□□□□□ -2.34
DDR48P18899 YOR199WYOR199W 330 nt0.43□□□□□ -2.34
DDR48P18899 AI5_ALPHAQ0070 1893 nt0.43□□□□□ -2.34
DDR48P18899 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
DDR48P18899 SCW11YGL028C 1629 nt0.42□□□□□ -2.34
DDR48P18899 HNT1YDL125C 477 nt0.42□□□□□ -2.34
DDR48P18899 YDR509WYDR509W 348 nt0.42□□□□□ -2.34
DDR48P18899 YHR028W-AYHR028W-A 321 nt0.42□□□□□ -2.34
DDR48P18899 URM1YIL008W 300 nt0.42□□□□□ -2.34
DDR48P18899 ACF4YJR083C 930 nt0.42□□□□□ -2.34
DDR48P18899 YDR521WYDR521W 336 nt0.41□□□□□ -2.34
DDR48P18899 QCR9YGR183C 201 nt0.41□□□□□ -2.34
DDR48P18899 ECM12YHR021W-A 456 nt0.41□□□□□ -2.34
DDR48P18899 YJR140W-AYJR140W-A 150 nt0.41□□□□□ -2.34
DDR48P18899 COX7YMR256C 183 nt0.41□□□□□ -2.34
DDR48P18899 RUF22RUF22 515 nt0.41□□□□□ -2.34
DDR48P18899 PDE2YOR360C 1581 nt0.4□□□□□ -2.34
DDR48P18899 tT(AGU)BtT(AGU)B 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)CtT(AGU)C 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)DtT(AGU)D 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)HtT(AGU)H 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)I1tT(AGU)I1 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)I2tT(AGU)I2 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)JtT(AGU)J 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)N1tT(AGU)N1 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)N2tT(AGU)N2 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)O1tT(AGU)O1 73 nt0.4□□□□□ -2.35
DDR48P18899 tT(AGU)O2tT(AGU)O2 73 nt0.4□□□□□ -2.35
DDR48P18899 SLM6YBR266C 453 nt0.4□□□□□ -2.35
DDR48P18899 YMR160WYMR160W 2451 nt0.4□□□□□ -2.35
DDR48P18899 tT(UGU)Q1tT(UGU)Q1 76 nt0.39□□□□□ -2.35
DDR48P18899 YOL014WYOL014W 375 nt0.39□□□□□ -2.35
DDR48P18899 YBR032WYBR032W 303 nt0.39□□□□□ -2.35
DDR48P18899 TFB6YOR352W 1032 nt0.39□□□□□ -2.35
DDR48P18899 MKT1YNL085W 2493 nt0.38□□□□□ -2.35
DDR48P18899 DBP6YNR038W 1890 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 53.8 ms