Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCSO14618 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCSO14618 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCSO14618 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCSO14618 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCSO14618 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.82■□□□□ 0.28
CCSO14618 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.81■□□□□ 0.28
CCSO14618 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCSO14618 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.81■□□□□ 0.28
CCSO14618 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 MIR4787-201ENST00000607364 84 ntBASIC16.81■□□□□ 0.28
CCSO14618 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCSO14618 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCSO14618 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.81■□□□□ 0.28
CCSO14618 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCSO14618 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.8■□□□□ 0.28
CCSO14618 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
CCSO14618 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.8■□□□□ 0.28
CCSO14618 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCSO14618 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.8■□□□□ 0.28
CCSO14618 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.8■□□□□ 0.28
CCSO14618 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCSO14618 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
CCSO14618 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.8■□□□□ 0.28
CCSO14618 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCSO14618 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.79■□□□□ 0.28
CCSO14618 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCSO14618 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.79■□□□□ 0.28
CCSO14618 AL033527.3-201ENST00000566366 1196 ntBASIC16.79■□□□□ 0.28
CCSO14618 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.79■□□□□ 0.28
CCSO14618 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.79■□□□□ 0.28
CCSO14618 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCSO14618 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCSO14618 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.78■□□□□ 0.28
CCSO14618 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCSO14618 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.78■□□□□ 0.28
CCSO14618 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCSO14618 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms