Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CDCA4P2-201ENST00000441182 718 ntBASIC19.55■□□□□ 0.72
KRT78Q8N1N4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 AC026185.1-201ENST00000445748 174 ntBASIC19.55■□□□□ 0.72
KRT78Q8N1N4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT78Q8N1N4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
KRT78Q8N1N4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
KRT78Q8N1N4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 AL512625.2-201ENST00000417533 625 ntBASIC19.52■□□□□ 0.72
KRT78Q8N1N4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT78Q8N1N4 AC138932.1-201ENST00000534164 6830 ntBASIC19.52■□□□□ 0.72
KRT78Q8N1N4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
KRT78Q8N1N4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT78Q8N1N4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT78Q8N1N4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.52■□□□□ 0.71
KRT78Q8N1N4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.52■□□□□ 0.71
KRT78Q8N1N4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 KRT18P68-201ENST00000392293 1000 ntBASIC19.51■□□□□ 0.71
KRT78Q8N1N4 AC133552.2-202ENST00000575694 574 ntBASIC19.51■□□□□ 0.71
KRT78Q8N1N4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 CYP2T3P-201ENST00000601990 817 ntBASIC19.51■□□□□ 0.71
KRT78Q8N1N4 AC092666.2-201ENST00000613287 246 ntBASIC19.51■□□□□ 0.71
KRT78Q8N1N4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT78Q8N1N4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms