Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFX6Q8HWS3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX6Q8HWS3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX6Q8HWS3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RFX6Q8HWS3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RFX6Q8HWS3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 SMG8-203ENST00000578922 2178 ntBASIC21.06■□□□□ 0.96
RFX6Q8HWS3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX6Q8HWS3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 MFSD11-216ENST00000590393 1141 ntBASIC21.05■□□□□ 0.96
RFX6Q8HWS3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX6Q8HWS3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RFX6Q8HWS3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX6Q8HWS3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX6Q8HWS3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms