Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YLR053CYLR053C 327 nt2.08□□□□□ -2.08
VPS38Q05919 YLR287CYLR287C 1068 nt2.08□□□□□ -2.08
VPS38Q05919 YOR394C-AYOR394C-A 168 nt2.08□□□□□ -2.08
VPS38Q05919 SDH7YDR511W 402 nt2.07□□□□□ -2.08
VPS38Q05919 UBC7YMR022W 498 nt2.07□□□□□ -2.08
VPS38Q05919 VMR1YHL035C 4779 nt2.07□□□□□ -2.08
VPS38Q05919 GYP5YPL249C 2685 nt2.07□□□□□ -2.08
VPS38Q05919 SIR4YDR227W 4077 nt2.07□□□□□ -2.08
VPS38Q05919 GRR1YJR090C 3456 nt2.07□□□□□ -2.08
VPS38Q05919 CBS1YDL069C 690 nt2.06□□□□□ -2.08
VPS38Q05919 YDR118W-AYDR118W-A 117 nt2.06□□□□□ -2.08
VPS38Q05919 BTT1YDR252W 450 nt2.06□□□□□ -2.08
VPS38Q05919 EMP24YGL200C 612 nt2.06□□□□□ -2.08
VPS38Q05919 YOR392WYOR392W 444 nt2.06□□□□□ -2.08
VPS38Q05919 YPR170W-AYPR170W-A 186 nt2.06□□□□□ -2.08
VPS38Q05919 YBR121C-AYBR121C-A 159 nt2.06□□□□□ -2.08
VPS38Q05919 YBR224WYBR224W 516 nt2.06□□□□□ -2.08
VPS38Q05919 CDC60YPL160W 3273 nt2.06□□□□□ -2.08
VPS38Q05919 USO1YDL058W 5373 nt2.05□□□□□ -2.08
VPS38Q05919 SWF1YDR126W 1011 nt2.05□□□□□ -2.08
VPS38Q05919 YKR075W-AYKR075W-A 270 nt2.05□□□□□ -2.08
VPS38Q05919 PGA1YNL158W 597 nt2.05□□□□□ -2.08
VPS38Q05919 MRPL50YNR022C 420 nt2.05□□□□□ -2.08
VPS38Q05919 MNL2YLR057W 2550 nt2.05□□□□□ -2.08
VPS38Q05919 LYS9YNR050C 1341 nt2.05□□□□□ -2.08
VPS38Q05919 RBK1YCR036W 1002 nt2.04□□□□□ -2.08
VPS38Q05919 YDL062WYDL062W 426 nt2.04□□□□□ -2.08
VPS38Q05919 YDR341CYDR341C 1824 nt2.04□□□□□ -2.08
VPS38Q05919 YHR138CYHR138C 345 nt2.04□□□□□ -2.08
VPS38Q05919 RPS24BYIL069C 408 nt2.04□□□□□ -2.08
VPS38Q05919 SMY1YKL079W 1971 nt2.04□□□□□ -2.08
VPS38Q05919 PEP3YLR148W 2757 nt2.04□□□□□ -2.08
VPS38Q05919 YOR053WYOR053W 342 nt2.04□□□□□ -2.08
VPS38Q05919 YPR012WYPR012W 255 nt2.04□□□□□ -2.08
VPS38Q05919 YBR285WYBR285W 435 nt2.04□□□□□ -2.08
VPS38Q05919 YPL238CYPL238C 390 nt2.03□□□□□ -2.08
VPS38Q05919 DOT6YER088C 2013 nt2.03□□□□□ -2.08
VPS38Q05919 NAB6YML117W 3405 nt2.03□□□□□ -2.09
VPS38Q05919 SYH1YPL105C 2550 nt2.02□□□□□ -2.09
VPS38Q05919 YDL152WYDL152W 366 nt2.02□□□□□ -2.09
VPS38Q05919 ATP6Q0085 780 nt2.02□□□□□ -2.09
VPS38Q05919 RPL37BYDR500C 267 nt2.02□□□□□ -2.09
VPS38Q05919 RTT102YGR275W 474 nt2.02□□□□□ -2.09
VPS38Q05919 YBL071CYBL071C 309 nt2.02□□□□□ -2.09
VPS38Q05919 YBL083CYBL083C 426 nt2.02□□□□□ -2.09
VPS38Q05919 YPL185WYPL185W 396 nt2.02□□□□□ -2.09
VPS38Q05919 YPR099CYPR099C 357 nt2.02□□□□□ -2.09
VPS38Q05919 DIS3YOL021C 3006 nt2.02□□□□□ -2.09
VPS38Q05919 YML009C-AYML009C-A 327 nt2.01□□□□□ -2.09
VPS38Q05919 YOR293C-AYOR293C-A 150 nt2.01□□□□□ -2.09
VPS38Q05919 RTP1YMR185W 2946 nt2.01□□□□□ -2.09
VPS38Q05919 SLM1YIL105C 2061 nt2.01□□□□□ -2.09
VPS38Q05919 SNF5YBR289W 2718 nt2.01□□□□□ -2.09
VPS38Q05919 GCN2YDR283C 4980 nt2□□□□□ -2.09
VPS38Q05919 UBP1YDL122W 2430 nt2□□□□□ -2.09
VPS38Q05919 YCR043CYCR043C 384 nt2□□□□□ -2.09
VPS38Q05919 YGL239CYGL239C 315 nt2□□□□□ -2.09
VPS38Q05919 YOR146WYOR146W 306 nt2□□□□□ -2.09
VPS38Q05919 YBR184WYBR184W 1572 nt2□□□□□ -2.09
VPS38Q05919 SEF1YBL066C 3447 nt2□□□□□ -2.09
VPS38Q05919 BUD2YKL092C 3315 nt1.99□□□□□ -2.09
VPS38Q05919 ZRG8YER033C 3231 nt1.99□□□□□ -2.09
VPS38Q05919 NAM7YMR080C 2916 nt1.99□□□□□ -2.09
VPS38Q05919 RPH1YER169W 2391 nt1.99□□□□□ -2.09
VPS38Q05919 ELG1YOR144C 2376 nt1.99□□□□□ -2.09
VPS38Q05919 VPS34YLR240W 2628 nt1.99□□□□□ -2.09
VPS38Q05919 snR56snR56 88 nt1.99□□□□□ -2.09
VPS38Q05919 DAD4YDR320C-A 219 nt1.99□□□□□ -2.09
VPS38Q05919 YAL068W-AYAL068W-A 255 nt1.99□□□□□ -2.09
VPS38Q05919 CYB5YNL111C 363 nt1.99□□□□□ -2.09
VPS38Q05919 PUT3YKL015W 2940 nt1.98□□□□□ -2.09
VPS38Q05919 PLC1YPL268W 2610 nt1.98□□□□□ -2.09
VPS38Q05919 YHR071C-AYHR071C-A 321 nt1.98□□□□□ -2.09
VPS38Q05919 YLR334CYLR334C 381 nt1.98□□□□□ -2.09
VPS38Q05919 YLR434CYLR434C 384 nt1.98□□□□□ -2.09
VPS38Q05919 YPL182CYPL182C 384 nt1.98□□□□□ -2.09
VPS38Q05919 GNT1YOR320C 1476 nt1.98□□□□□ -2.09
VPS38Q05919 PAN3YKL025C 2040 nt1.98□□□□□ -2.09
VPS38Q05919 CAT2YML042W 2013 nt1.98□□□□□ -2.09
VPS38Q05919 DAS1YJL149W 1992 nt1.98□□□□□ -2.09
VPS38Q05919 YCR087C-AYCR087C-A 462 nt1.97□□□□□ -2.09
VPS38Q05919 BSC3YLR465C 309 nt1.97□□□□□ -2.09
VPS38Q05919 PET309YLR067C 2898 nt1.97□□□□□ -2.09
VPS38Q05919 CHC1YGL206C 4962 nt1.96□□□□□ -2.1
VPS38Q05919 IRR1YIL026C 3453 nt1.96□□□□□ -2.1
VPS38Q05919 TOF2YKR010C 2316 nt1.96□□□□□ -2.1
VPS38Q05919 ARP7YPR034W 1434 nt1.95□□□□□ -2.1
VPS38Q05919 ATG9YDL149W 2994 nt1.95□□□□□ -2.1
VPS38Q05919 YHL046W-AYHL046W-A 327 nt1.95□□□□□ -2.1
VPS38Q05919 YMR272W-BYMR272W-B 108 nt1.95□□□□□ -2.1
VPS38Q05919 HER1YOR227W 3741 nt1.95□□□□□ -2.1
VPS38Q05919 YCR102W-AYCR102W-A 198 nt1.94□□□□□ -2.1
VPS38Q05919 YIL066W-AYIL066W-A 444 nt1.94□□□□□ -2.1
VPS38Q05919 YKL183C-AYKL183C-A 213 nt1.94□□□□□ -2.1
VPS38Q05919 PDR8YLR266C 2106 nt1.93□□□□□ -2.1
VPS38Q05919 YDL011CYDL011C 324 nt1.93□□□□□ -2.1
VPS38Q05919 RPA34YJL148W 702 nt1.93□□□□□ -2.1
VPS38Q05919 YPL261CYPL261C 309 nt1.93□□□□□ -2.1
VPS38Q05919 YMR045CYMR045C 5268 nt1.92□□□□□ -2.1
VPS38Q05919 WIP1YDR374W-A 270 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 109.1 ms