Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 YMR153C-AYMR153C-A 336 nt1.86□□□□□ -2.11
RPN9Q04062 YMR272W-BYMR272W-B 108 nt1.86□□□□□ -2.11
RPN9Q04062 SNF5YBR289W 2718 nt1.86□□□□□ -2.11
RPN9Q04062 RPH1YER169W 2391 nt1.86□□□□□ -2.11
RPN9Q04062 YLR149CYLR149C 2193 nt1.85□□□□□ -2.11
RPN9Q04062 YJL007CYJL007C 315 nt1.85□□□□□ -2.11
RPN9Q04062 TMA7YLR262C-A 195 nt1.85□□□□□ -2.11
RPN9Q04062 YBR121C-AYBR121C-A 159 nt1.85□□□□□ -2.11
RPN9Q04062 PEX8YGR077C 1770 nt1.85□□□□□ -2.11
RPN9Q04062 PLC1YPL268W 2610 nt1.85□□□□□ -2.11
RPN9Q04062 TIF11YMR260C 462 nt1.84□□□□□ -2.11
RPN9Q04062 CYB5YNL111C 363 nt1.84□□□□□ -2.11
RPN9Q04062 YBL083CYBL083C 426 nt1.84□□□□□ -2.11
RPN9Q04062 YPL205CYPL205C 345 nt1.84□□□□□ -2.11
RPN9Q04062 SEC31YDL195W 3822 nt1.84□□□□□ -2.12
RPN9Q04062 PEP3YLR148W 2757 nt1.83□□□□□ -2.12
RPN9Q04062 INO80YGL150C 4470 nt1.83□□□□□ -2.12
RPN9Q04062 FAB1YFR019W 6837 nt1.83□□□□□ -2.12
RPN9Q04062 RBK1YCR036W 1002 nt1.83□□□□□ -2.12
RPN9Q04062 YJR157WYJR157W 363 nt1.83□□□□□ -2.12
RPN9Q04062 FCF2YLR051C 654 nt1.83□□□□□ -2.12
RPN9Q04062 YLR101CYLR101C 396 nt1.83□□□□□ -2.12
RPN9Q04062 CMC2YBL059C-A 330 nt1.83□□□□□ -2.12
RPN9Q04062 YPL238CYPL238C 390 nt1.83□□□□□ -2.12
RPN9Q04062 MYO4YAL029C 4416 nt1.83□□□□□ -2.12
RPN9Q04062 SMY1YKL079W 1971 nt1.83□□□□□ -2.12
RPN9Q04062 ARP7YPR034W 1434 nt1.83□□□□□ -2.12
RPN9Q04062 AGC1YPR021C 2709 nt1.82□□□□□ -2.12
RPN9Q04062 IRC20YLR247C 4671 nt1.82□□□□□ -2.12
RPN9Q04062 BTT1YDR252W 450 nt1.82□□□□□ -2.12
RPN9Q04062 QCR7YDR529C 384 nt1.82□□□□□ -2.12
RPN9Q04062 YER006C-AYER006C-A 318 nt1.82□□□□□ -2.12
RPN9Q04062 YBR032WYBR032W 303 nt1.82□□□□□ -2.12
RPN9Q04062 SLM1YIL105C 2061 nt1.82□□□□□ -2.12
RPN9Q04062 YER135CYER135C 393 nt1.81□□□□□ -2.12
RPN9Q04062 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
RPN9Q04062 PGA1YNL158W 597 nt1.81□□□□□ -2.12
RPN9Q04062 ATG11YPR049C 3537 nt1.81□□□□□ -2.12
RPN9Q04062 DOT6YER088C 2013 nt1.81□□□□□ -2.12
RPN9Q04062 CRG1YHR209W 876 nt1.8□□□□□ -2.12
RPN9Q04062 MYO2YOR326W 4725 nt1.8□□□□□ -2.12
RPN9Q04062 MSH6YDR097C 3729 nt1.79□□□□□ -2.12
RPN9Q04062 YHR073W-AYHR073W-A 177 nt1.79□□□□□ -2.12
RPN9Q04062 URM1YIL008W 300 nt1.79□□□□□ -2.12
RPN9Q04062 RPA34YJL148W 702 nt1.79□□□□□ -2.12
RPN9Q04062 YBR184WYBR184W 1572 nt1.79□□□□□ -2.12
RPN9Q04062 VPS34YLR240W 2628 nt1.79□□□□□ -2.12
RPN9Q04062 YNL144CYNL144C 2223 nt1.78□□□□□ -2.12
RPN9Q04062 YER023C-AYER023C-A 213 nt1.78□□□□□ -2.12
RPN9Q04062 YHR210CYHR210C 1026 nt1.78□□□□□ -2.12
RPN9Q04062 TMA22YJR014W 597 nt1.78□□□□□ -2.12
RPN9Q04062 RUF22RUF22 515 nt1.78□□□□□ -2.12
RPN9Q04062 YJR039WYJR039W 3366 nt1.78□□□□□ -2.12
RPN9Q04062 DFG16YOR030W 1860 nt1.77□□□□□ -2.13
RPN9Q04062 HSH155YMR288W 2916 nt1.77□□□□□ -2.13
RPN9Q04062 GDS1YOR355W 1569 nt1.77□□□□□ -2.13
RPN9Q04062 DNF3YMR162C 4971 nt1.77□□□□□ -2.13
RPN9Q04062 YCR043CYCR043C 384 nt1.77□□□□□ -2.13
RPN9Q04062 YCR102W-AYCR102W-A 198 nt1.77□□□□□ -2.13
RPN9Q04062 NFU1YKL040C 771 nt1.77□□□□□ -2.13
RPN9Q04062 ZEO1YOL109W 342 nt1.77□□□□□ -2.13
RPN9Q04062 YOR192C-CYOR192C-C 237 nt1.77□□□□□ -2.13
RPN9Q04062 HSL1YKL101W 4557 nt1.77□□□□□ -2.13
RPN9Q04062 ZRG8YER033C 3231 nt1.76□□□□□ -2.13
RPN9Q04062 DAS1YJL149W 1992 nt1.76□□□□□ -2.13
RPN9Q04062 SEF1YBL066C 3447 nt1.76□□□□□ -2.13
RPN9Q04062 RPL42BYHR141C 321 nt1.76□□□□□ -2.13
RPN9Q04062 YLR255CYLR255C 354 nt1.76□□□□□ -2.13
RPN9Q04062 RPL42AYNL162W 321 nt1.76□□□□□ -2.13
RPN9Q04062 YOL159C-AYOL159C-A 273 nt1.76□□□□□ -2.13
RPN9Q04062 FYV12YOR183W 390 nt1.76□□□□□ -2.13
RPN9Q04062 YPR099CYPR099C 357 nt1.76□□□□□ -2.13
RPN9Q04062 SEC63YOR254C 1992 nt1.75□□□□□ -2.13
RPN9Q04062 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
RPN9Q04062 YJR098CYJR098C 1971 nt1.74□□□□□ -2.13
RPN9Q04062 YER076W-AYER076W-A 348 nt1.74□□□□□ -2.13
RPN9Q04062 YLR222C-AYLR222C-A 231 nt1.74□□□□□ -2.13
RPN9Q04062 YPR177CYPR177C 372 nt1.74□□□□□ -2.13
RPN9Q04062 HIR3YJR140C 4947 nt1.73□□□□□ -2.13
RPN9Q04062 PAN3YKL025C 2040 nt1.73□□□□□ -2.13
RPN9Q04062 YDL152WYDL152W 366 nt1.73□□□□□ -2.13
RPN9Q04062 VAR1Q0140 1197 nt1.73□□□□□ -2.13
RPN9Q04062 YKL183C-AYKL183C-A 213 nt1.73□□□□□ -2.13
RPN9Q04062 YLR264C-AYLR264C-A 117 nt1.73□□□□□ -2.13
RPN9Q04062 CGI121YML036W 546 nt1.73□□□□□ -2.13
RPN9Q04062 PEP1YBL017C 4740 nt1.73□□□□□ -2.13
RPN9Q04062 GUP1YGL084C 1683 nt1.73□□□□□ -2.13
RPN9Q04062 SEY1YOR165W 2331 nt1.72□□□□□ -2.13
RPN9Q04062 YER087C-AYER087C-A 552 nt1.72□□□□□ -2.13
RPN9Q04062 YKL063CYKL063C 504 nt1.72□□□□□ -2.13
RPN9Q04062 YLR287CYLR287C 1068 nt1.72□□□□□ -2.13
RPN9Q04062 YNL324WYNL324W 396 nt1.72□□□□□ -2.13
RPN9Q04062 GNT1YOR320C 1476 nt1.71□□□□□ -2.14
RPN9Q04062 PKH3YDR466W 2697 nt1.71□□□□□ -2.14
RPN9Q04062 MKT1YNL085W 2493 nt1.71□□□□□ -2.14
RPN9Q04062 PAU3YCR104W 375 nt1.71□□□□□ -2.14
RPN9Q04062 YGR042WYGR042W 816 nt1.71□□□□□ -2.14
RPN9Q04062 YLR406C-AYLR406C-A 150 nt1.71□□□□□ -2.14
RPN9Q04062 YML009C-AYML009C-A 327 nt1.71□□□□□ -2.14
RPN9Q04062 TBS1YBR150C 3285 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 156.8 ms