Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 YBR184WYBR184W 1572 nt1.65□□□□□ -2.15
LCP5P40079 YGR045CYGR045C 363 nt1.65□□□□□ -2.15
LCP5P40079 tT(UGU)HtT(UGU)H 72 nt1.65□□□□□ -2.15
LCP5P40079 YHR210CYHR210C 1026 nt1.65□□□□□ -2.15
LCP5P40079 IRE1YHR079C 3348 nt1.65□□□□□ -2.15
LCP5P40079 CDC24YAL041W 2565 nt1.64□□□□□ -2.15
LCP5P40079 YJR039WYJR039W 3366 nt1.64□□□□□ -2.15
LCP5P40079 YCR043CYCR043C 384 nt1.64□□□□□ -2.15
LCP5P40079 YER084W-AYER084W-A 513 nt1.64□□□□□ -2.15
LCP5P40079 YGR025WYGR025W 303 nt1.64□□□□□ -2.15
LCP5P40079 YHR139C-AYHR139C-A 312 nt1.64□□□□□ -2.15
LCP5P40079 CRG1YHR209W 876 nt1.64□□□□□ -2.15
LCP5P40079 YLR269CYLR269C 351 nt1.64□□□□□ -2.15
LCP5P40079 RPS18BYML026C 441 nt1.64□□□□□ -2.15
LCP5P40079 YML108WYML108W 318 nt1.64□□□□□ -2.15
LCP5P40079 TIF11YMR260C 462 nt1.64□□□□□ -2.15
LCP5P40079 snR13snR13 124 nt1.64□□□□□ -2.15
LCP5P40079 DAS1YJL149W 1992 nt1.64□□□□□ -2.15
LCP5P40079 DOT6YER088C 2013 nt1.64□□□□□ -2.15
LCP5P40079 SEC63YOR254C 1992 nt1.63□□□□□ -2.15
LCP5P40079 BRR2YER172C 6492 nt1.63□□□□□ -2.15
LCP5P40079 HMLALPHA2YCL067C 633 nt1.63□□□□□ -2.15
LCP5P40079 MATALPHA2YCR039C 633 nt1.63□□□□□ -2.15
LCP5P40079 ATP17YDR377W 306 nt1.63□□□□□ -2.15
LCP5P40079 FCF2YLR051C 654 nt1.63□□□□□ -2.15
LCP5P40079 YBR121C-AYBR121C-A 159 nt1.63□□□□□ -2.15
LCP5P40079 Q0017Q0017 162 nt1.63□□□□□ -2.15
LCP5P40079 YSW1YBR148W 1830 nt1.63□□□□□ -2.15
LCP5P40079 YLR035C-AYLR035C-A 3468 nt1.63□□□□□ -2.15
LCP5P40079 TFC8YPL007C 1767 nt1.62□□□□□ -2.15
LCP5P40079 TRM3YDL112W 4311 nt1.62□□□□□ -2.15
LCP5P40079 YCR001WYCR001W 315 nt1.62□□□□□ -2.15
LCP5P40079 AIM29YKR074W 468 nt1.62□□□□□ -2.15
LCP5P40079 YBP1YBR216C 2025 nt1.62□□□□□ -2.15
LCP5P40079 HIR3YJR140C 4947 nt1.62□□□□□ -2.15
LCP5P40079 QCR7YDR529C 384 nt1.61□□□□□ -2.15
LCP5P40079 YHR052W-AYHR052W-A 195 nt1.61□□□□□ -2.15
LCP5P40079 YHR054W-AYHR054W-A 195 nt1.61□□□□□ -2.15
LCP5P40079 RPL42BYHR141C 321 nt1.61□□□□□ -2.15
LCP5P40079 RPL42AYNL162W 321 nt1.61□□□□□ -2.15
LCP5P40079 GAL7YBR018C 1101 nt1.61□□□□□ -2.15
LCP5P40079 YBR076C-AYBR076C-A 267 nt1.61□□□□□ -2.15
LCP5P40079 SEF1YBL066C 3447 nt1.61□□□□□ -2.15
LCP5P40079 PKH3YDR466W 2697 nt1.6□□□□□ -2.15
LCP5P40079 SEY1YOR165W 2331 nt1.6□□□□□ -2.15
LCP5P40079 YEL030C-AYEL030C-A 315 nt1.6□□□□□ -2.15
LCP5P40079 BI2Q0110 1272 nt1.6□□□□□ -2.15
LCP5P40079 HUR1YGL168W 333 nt1.6□□□□□ -2.15
LCP5P40079 YKL183C-AYKL183C-A 213 nt1.6□□□□□ -2.15
LCP5P40079 CGI121YML036W 546 nt1.6□□□□□ -2.15
LCP5P40079 HSL1YKL101W 4557 nt1.6□□□□□ -2.15
LCP5P40079 YOR192C-AYOR192C-A 1317 nt1.59□□□□□ -2.16
LCP5P40079 MEC1YBR136W 7107 nt1.59□□□□□ -2.16
LCP5P40079 FRK1YPL141C 2598 nt1.58□□□□□ -2.16
LCP5P40079 TUS1YLR425W 3924 nt1.58□□□□□ -2.16
LCP5P40079 Q0144Q0144 330 nt1.58□□□□□ -2.16
LCP5P40079 NBL1YHR199C-A 222 nt1.58□□□□□ -2.16
LCP5P40079 CDC33YOL139C 642 nt1.58□□□□□ -2.16
LCP5P40079 YGR250CYGR250C 2346 nt1.58□□□□□ -2.16
LCP5P40079 ASM4YDL088C 1587 nt1.58□□□□□ -2.16
LCP5P40079 MON2YNL297C 4911 nt1.57□□□□□ -2.16
LCP5P40079 YHR125WYHR125W 306 nt1.57□□□□□ -2.16
LCP5P40079 PFD1YJL179W 330 nt1.57□□□□□ -2.16
LCP5P40079 YLR171WYLR171W 390 nt1.57□□□□□ -2.16
LCP5P40079 YLR255CYLR255C 354 nt1.57□□□□□ -2.16
LCP5P40079 TOM22YNL131W 459 nt1.57□□□□□ -2.16
LCP5P40079 ATP19YOL077W-A 207 nt1.57□□□□□ -2.16
LCP5P40079 SAR1YPL218W 573 nt1.57□□□□□ -2.16
LCP5P40079 YLR422WYLR422W 5799 nt1.57□□□□□ -2.16
LCP5P40079 CTR9YOL145C 3234 nt1.56□□□□□ -2.16
LCP5P40079 YER088C-AYER088C-A 324 nt1.56□□□□□ -2.16
LCP5P40079 ECL1YGR146C 636 nt1.56□□□□□ -2.16
LCP5P40079 YIL102CYIL102C 306 nt1.56□□□□□ -2.16
LCP5P40079 YLR456WYLR456W 615 nt1.56□□□□□ -2.16
LCP5P40079 YPR099CYPR099C 357 nt1.56□□□□□ -2.16
LCP5P40079 snR41snR41 95 nt1.56□□□□□ -2.16
LCP5P40079 CAT8YMR280C 4302 nt1.56□□□□□ -2.16
LCP5P40079 MSC6YOR354C 2079 nt1.55□□□□□ -2.16
LCP5P40079 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
LCP5P40079 RPL31AYDL075W 342 nt1.55□□□□□ -2.16
LCP5P40079 FMP23YBR047W 528 nt1.55□□□□□ -2.16
LCP5P40079 YPL068CYPL068C 882 nt1.55□□□□□ -2.16
LCP5P40079 snR54snR54 86 nt1.55□□□□□ -2.16
LCP5P40079 PAN3YKL025C 2040 nt1.54□□□□□ -2.16
LCP5P40079 YDL152WYDL152W 366 nt1.54□□□□□ -2.16
LCP5P40079 YER135CYER135C 393 nt1.54□□□□□ -2.16
LCP5P40079 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
LCP5P40079 TMA22YJR014W 597 nt1.54□□□□□ -2.16
LCP5P40079 TRX1YLR043C 312 nt1.54□□□□□ -2.16
LCP5P40079 YOL159C-AYOL159C-A 273 nt1.54□□□□□ -2.16
LCP5P40079 NOP53YPL146C 1368 nt1.54□□□□□ -2.16
LCP5P40079 GNT1YOR320C 1476 nt1.54□□□□□ -2.16
LCP5P40079 YER023C-AYER023C-A 213 nt1.53□□□□□ -2.16
LCP5P40079 MCM22YJR135C 720 nt1.53□□□□□ -2.16
LCP5P40079 YLR202CYLR202C 327 nt1.53□□□□□ -2.16
LCP5P40079 YBR032WYBR032W 303 nt1.53□□□□□ -2.16
LCP5P40079 RLM1YPL089C 2031 nt1.53□□□□□ -2.16
LCP5P40079 RKM1YPL208W 1752 nt1.53□□□□□ -2.16
LCP5P40079 YPR177CYPR177C 372 nt1.53□□□□□ -2.16
LCP5P40079 URM1YIL008W 300 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms