Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 DGR2YKL121W 2559 nt1.2□□□□□ -2.22
LDB7P38210 MVP1YMR004W 1536 nt1.2□□□□□ -2.22
LDB7P38210 OSH6YKR003W 1347 nt1.19□□□□□ -2.22
LDB7P38210 MAK10YEL053C 2202 nt1.19□□□□□ -2.22
LDB7P38210 CRG1YHR209W 876 nt1.19□□□□□ -2.22
LDB7P38210 IRC19YLL033W 693 nt1.19□□□□□ -2.22
LDB7P38210 YLR198CYLR198C 360 nt1.19□□□□□ -2.22
LDB7P38210 AHC1YOR023C 1701 nt1.19□□□□□ -2.22
LDB7P38210 YOR376WYOR376W 369 nt1.19□□□□□ -2.22
LDB7P38210 YPR147CYPR147C 915 nt1.19□□□□□ -2.22
LDB7P38210 PBY1YBR094W 2262 nt1.19□□□□□ -2.22
LDB7P38210 SWT1YOR166C 1377 nt1.19□□□□□ -2.22
LDB7P38210 MSH5YDL154W 2706 nt1.18□□□□□ -2.22
LDB7P38210 MUK1YPL070W 1839 nt1.18□□□□□ -2.22
LDB7P38210 SPO75YLL005C 2607 nt1.18□□□□□ -2.22
LDB7P38210 YML003WYML003W 873 nt1.18□□□□□ -2.22
LDB7P38210 CTK3YML112W 891 nt1.18□□□□□ -2.22
LDB7P38210 YNL146C-AYNL146C-A 195 nt1.18□□□□□ -2.22
LDB7P38210 YPL197CYPL197C 414 nt1.18□□□□□ -2.22
LDB7P38210 YLR422WYLR422W 5799 nt1.18□□□□□ -2.22
LDB7P38210 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
LDB7P38210 YCS4YLR272C 3531 nt1.18□□□□□ -2.22
LDB7P38210 UFD2YDL190C 2886 nt1.17□□□□□ -2.22
LDB7P38210 YGL015CYGL015C 393 nt1.17□□□□□ -2.22
LDB7P38210 tT(UGU)Q1tT(UGU)Q1 76 nt1.17□□□□□ -2.22
LDB7P38210 PMD1YER132C 5262 nt1.17□□□□□ -2.22
LDB7P38210 CDC36YDL165W 576 nt1.16□□□□□ -2.22
LDB7P38210 MND1YGL183C 660 nt1.16□□□□□ -2.22
LDB7P38210 YIL020C-AYIL020C-A 339 nt1.16□□□□□ -2.22
LDB7P38210 VPS52YDR484W 1926 nt1.16□□□□□ -2.22
LDB7P38210 YDR169C-AYDR169C-A 150 nt1.15□□□□□ -2.23
LDB7P38210 SMB1YER029C 591 nt1.15□□□□□ -2.23
LDB7P38210 tV(UAC)BtV(UAC)B 74 nt1.15□□□□□ -2.23
LDB7P38210 tV(UAC)DtV(UAC)D 74 nt1.15□□□□□ -2.23
LDB7P38210 YKL111CYKL111C 336 nt1.15□□□□□ -2.23
LDB7P38210 DCP1YOL149W 696 nt1.15□□□□□ -2.23
LDB7P38210 YPR096CYPR096C 303 nt1.15□□□□□ -2.23
LDB7P38210 SEC3YER008C 4011 nt1.15□□□□□ -2.23
LDB7P38210 SIP4YJL089W 2490 nt1.15□□□□□ -2.23
LDB7P38210 UTP13YLR222C 2454 nt1.15□□□□□ -2.23
LDB7P38210 SEF1YBL066C 3447 nt1.14□□□□□ -2.23
LDB7P38210 snR9snR9 187 nt1.14□□□□□ -2.23
LDB7P38210 YEL018C-AYEL018C-A 534 nt1.14□□□□□ -2.23
LDB7P38210 CHZ1YER030W 462 nt1.14□□□□□ -2.23
LDB7P38210 RTT102YGR275W 474 nt1.14□□□□□ -2.23
LDB7P38210 LRP1YHR081W 555 nt1.14□□□□□ -2.23
LDB7P38210 ECM9YKR004C 1134 nt1.14□□□□□ -2.23
LDB7P38210 YOR161W-BYOR161W-B 261 nt1.14□□□□□ -2.23
LDB7P38210 BPH1YCR032W 6504 nt1.13□□□□□ -2.23
LDB7P38210 FSH1YHR049W 732 nt1.13□□□□□ -2.23
LDB7P38210 SPC1YJR010C-A 285 nt1.13□□□□□ -2.23
LDB7P38210 RPL40BYKR094C 387 nt1.13□□□□□ -2.23
LDB7P38210 CSM4YPL200W 471 nt1.13□□□□□ -2.23
LDB7P38210 YPR063CYPR063C 423 nt1.13□□□□□ -2.23
LDB7P38210 TTI1YKL033W 3117 nt1.13□□□□□ -2.23
LDB7P38210 SEC5YDR166C 2916 nt1.12□□□□□ -2.23
LDB7P38210 YDR461C-AYDR461C-A 243 nt1.12□□□□□ -2.23
LDB7P38210 YER121WYER121W 345 nt1.12□□□□□ -2.23
LDB7P38210 YOL159CYOL159C 516 nt1.12□□□□□ -2.23
LDB7P38210 YBR012W-AYBR012W-A 1323 nt1.12□□□□□ -2.23
LDB7P38210 YOR142W-AYOR142W-A 1323 nt1.12□□□□□ -2.23
LDB7P38210 YPR158W-AYPR158W-A 1323 nt1.12□□□□□ -2.23
LDB7P38210 NST1YNL091W 3723 nt1.12□□□□□ -2.23
LDB7P38210 SMC4YLR086W 4257 nt1.12□□□□□ -2.23
LDB7P38210 snR79snR79 84 nt1.11□□□□□ -2.23
LDB7P38210 YDR220CYDR220C 294 nt1.11□□□□□ -2.23
LDB7P38210 RPL42BYHR141C 321 nt1.11□□□□□ -2.23
LDB7P38210 YJL047C-AYJL047C-A 135 nt1.11□□□□□ -2.23
LDB7P38210 RCN1YKL159C 636 nt1.11□□□□□ -2.23
LDB7P38210 RPL42AYNL162W 321 nt1.11□□□□□ -2.23
LDB7P38210 TIM18YOR297C 579 nt1.11□□□□□ -2.23
LDB7P38210 YPR146CYPR146C 330 nt1.11□□□□□ -2.23
LDB7P38210 YSY6YBR162W-A 198 nt1.11□□□□□ -2.23
LDB7P38210 SPR3YGR059W 1539 nt1.1□□□□□ -2.23
LDB7P38210 PIP2YOR363C 2991 nt1.1□□□□□ -2.23
LDB7P38210 YDL211CYDL211C 1119 nt1.1□□□□□ -2.23
LDB7P38210 SNO3YFL060C 669 nt1.1□□□□□ -2.23
LDB7P38210 YLR271WYLR271W 825 nt1.1□□□□□ -2.23
LDB7P38210 YLR366WYLR366W 306 nt1.1□□□□□ -2.23
LDB7P38210 COX7YMR256C 183 nt1.1□□□□□ -2.23
LDB7P38210 SNO2YNL334C 669 nt1.1□□□□□ -2.23
LDB7P38210 YLL054CYLL054C 2532 nt1.1□□□□□ -2.23
LDB7P38210 YHL009W-AYHL009W-A 1242 nt1.09□□□□□ -2.23
LDB7P38210 FCF2YLR051C 654 nt1.09□□□□□ -2.23
LDB7P38210 YBR063CYBR063C 1215 nt1.09□□□□□ -2.23
LDB7P38210 ZRG17YNR039C 1818 nt1.09□□□□□ -2.23
LDB7P38210 SPT7YBR081C 3999 nt1.08□□□□□ -2.24
LDB7P38210 NBP1YLR457C 960 nt1.08□□□□□ -2.24
LDB7P38210 SGO1YOR073W 1773 nt1.07□□□□□ -2.24
LDB7P38210 YLR285C-AYLR285C-A 171 nt1.07□□□□□ -2.24
LDB7P38210 YMR254CYMR254C 309 nt1.07□□□□□ -2.24
LDB7P38210 SWS2YNL081C 432 nt1.07□□□□□ -2.24
LDB7P38210 YCL046WYCL046W 324 nt1.07□□□□□ -2.24
LDB7P38210 RAD50YNL250W 3939 nt1.07□□□□□ -2.24
LDB7P38210 HDA3YPR179C 1968 nt1.07□□□□□ -2.24
LDB7P38210 VPS54YDR027C 2670 nt1.06□□□□□ -2.24
LDB7P38210 YDL152WYDL152W 366 nt1.06□□□□□ -2.24
LDB7P38210 YGL217CYGL217C 342 nt1.06□□□□□ -2.24
LDB7P38210 SCEIQ0160 708 nt1.06□□□□□ -2.24
LDB7P38210 YGR283CYGR283C 1026 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 76.9 ms