Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 tW(CCA)G1tW(CCA)G1 72 nt2.57□□□□□ -2
NMD5P46970 tW(CCA)G2tW(CCA)G2 72 nt2.57□□□□□ -2
NMD5P46970 tW(CCA)JtW(CCA)J 72 nt2.57□□□□□ -2
NMD5P46970 tW(CCA)KtW(CCA)K 72 nt2.57□□□□□ -2
NMD5P46970 tW(CCA)MtW(CCA)M 72 nt2.57□□□□□ -2
NMD5P46970 tW(CCA)PtW(CCA)P 72 nt2.57□□□□□ -2
NMD5P46970 HYR1YIR037W 492 nt2.57□□□□□ -2
NMD5P46970 HCH1YNL281W 462 nt2.57□□□□□ -2
NMD5P46970 VPS41YDR080W 2979 nt2.57□□□□□ -2
NMD5P46970 APC2YLR127C 2562 nt2.56□□□□□ -2
NMD5P46970 BRO1YPL084W 2535 nt2.56□□□□□ -2
NMD5P46970 YMR31YFR049W 372 nt2.56□□□□□ -2
NMD5P46970 YPR099CYPR099C 357 nt2.56□□□□□ -2
NMD5P46970 LYS9YNR050C 1341 nt2.56□□□□□ -2
NMD5P46970 TRA1YHR099W 11235 nt2.56□□□□□ -2
NMD5P46970 IRC10YOL015W 1761 nt2.56□□□□□ -2
NMD5P46970 GCV2YMR189W 3105 nt2.55□□□□□ -2
NMD5P46970 RPL35AYDL191W 363 nt2.55□□□□□ -2
NMD5P46970 CSN9YDR179C 489 nt2.55□□□□□ -2
NMD5P46970 RPS24AYER074W 408 nt2.55□□□□□ -2
NMD5P46970 YLR154W-EYLR154W-E 204 nt2.55□□□□□ -2
NMD5P46970 SUL1YBR294W 2580 nt2.55□□□□□ -2
NMD5P46970 FUS1YCL027W 1539 nt2.55□□□□□ -2
NMD5P46970 NUM1YDR150W 8247 nt2.54□□□□□ -2
NMD5P46970 REV1YOR346W 2958 nt2.54□□□□□ -2
NMD5P46970 YGL149WYGL149W 306 nt2.54□□□□□ -2
NMD5P46970 YGR265WYGR265W 411 nt2.54□□□□□ -2
NMD5P46970 GPI14YJR013W 1212 nt2.54□□□□□ -2
NMD5P46970 MRPL33YMR286W 261 nt2.54□□□□□ -2
NMD5P46970 YNL198CYNL198C 303 nt2.54□□□□□ -2
NMD5P46970 YOR072W-AYOR072W-A 249 nt2.54□□□□□ -2
NMD5P46970 SPB1YCL054W 2526 nt2.54□□□□□ -2
NMD5P46970 SVL3YPL032C 2478 nt2.53□□□□□ -2
NMD5P46970 OSW7YFR039C 1533 nt2.53□□□□□ -2
NMD5P46970 YGL188C-AYGL188C-A 141 nt2.53□□□□□ -2
NMD5P46970 YGR069WYGR069W 336 nt2.53□□□□□ -2
NMD5P46970 BLI1YKL061W 342 nt2.53□□□□□ -2
NMD5P46970 TAR1YLR154W-C 375 nt2.53□□□□□ -2
NMD5P46970 RPS18BYML026C 441 nt2.53□□□□□ -2
NMD5P46970 YMR194C-AYMR194C-A 225 nt2.53□□□□□ -2
NMD5P46970 YPR146CYPR146C 330 nt2.53□□□□□ -2
NMD5P46970 YIL166CYIL166C 1629 nt2.53□□□□□ -2
NMD5P46970 MMS1YPR164W 4224 nt2.53□□□□□ -2.01
NMD5P46970 SSE1YPL106C 2082 nt2.53□□□□□ -2.01
NMD5P46970 SPF1YEL031W 3648 nt2.53□□□□□ -2.01
NMD5P46970 SLN1YIL147C 3663 nt2.52□□□□□ -2.01
NMD5P46970 SGO1YOR073W 1773 nt2.52□□□□□ -2.01
NMD5P46970 CDC24YAL041W 2565 nt2.52□□□□□ -2.01
NMD5P46970 MSB1YOR188W 3414 nt2.52□□□□□ -2.01
NMD5P46970 YGL007C-AYGL007C-A 87 nt2.52□□□□□ -2.01
NMD5P46970 YLR294CYLR294C 330 nt2.52□□□□□ -2.01
NMD5P46970 CCW14YLR390W-A 717 nt2.52□□□□□ -2.01
NMD5P46970 YLR458WYLR458W 381 nt2.52□□□□□ -2.01
NMD5P46970 MGR1YCL044C 1254 nt2.52□□□□□ -2.01
NMD5P46970 PHO91YNR013C 2685 nt2.52□□□□□ -2.01
NMD5P46970 SGS1YMR190C 4344 nt2.51□□□□□ -2.01
NMD5P46970 SWR1YDR334W 4545 nt2.51□□□□□ -2.01
NMD5P46970 MZM1YDR493W 372 nt2.51□□□□□ -2.01
NMD5P46970 HYP2YEL034W 474 nt2.51□□□□□ -2.01
NMD5P46970 YGR174W-AYGR174W-A 87 nt2.51□□□□□ -2.01
NMD5P46970 YJL020W-AYJL020W-A 258 nt2.51□□□□□ -2.01
NMD5P46970 RPL32YBL092W 393 nt2.51□□□□□ -2.01
NMD5P46970 RPL25YOL127W 429 nt2.51□□□□□ -2.01
NMD5P46970 RLF2YPR018W 1821 nt2.51□□□□□ -2.01
NMD5P46970 NPR3YHL023C 3441 nt2.5□□□□□ -2.01
NMD5P46970 YMR324CYMR324C 243 nt2.5□□□□□ -2.01
NMD5P46970 KTI11YBL071W-A 249 nt2.5□□□□□ -2.01
NMD5P46970 FPR1YNL135C 345 nt2.5□□□□□ -2.01
NMD5P46970 YBR121C-AYBR121C-A 159 nt2.5□□□□□ -2.01
NMD5P46970 PAC1YOR269W 1485 nt2.5□□□□□ -2.01
NMD5P46970 RLI1YDR091C 1827 nt2.49□□□□□ -2.01
NMD5P46970 ISW1YBR245C 3390 nt2.49□□□□□ -2.01
NMD5P46970 YGL041CYGL041C 204 nt2.49□□□□□ -2.01
NMD5P46970 AIM9YER080W 1884 nt2.49□□□□□ -2.01
NMD5P46970 ECM25YJL201W 1800 nt2.49□□□□□ -2.01
NMD5P46970 DNL4YOR005C 2835 nt2.49□□□□□ -2.01
NMD5P46970 YBT1YLL048C 4986 nt2.49□□□□□ -2.01
NMD5P46970 YDR239CYDR239C 2364 nt2.49□□□□□ -2.01
NMD5P46970 TOR1YJR066W 7413 nt2.48□□□□□ -2.01
NMD5P46970 TOP2YNL088W 4287 nt2.48□□□□□ -2.01
NMD5P46970 CDC36YDL165W 576 nt2.48□□□□□ -2.01
NMD5P46970 YDR048CYDR048C 315 nt2.48□□□□□ -2.01
NMD5P46970 LSO2YGR169C-A 279 nt2.48□□□□□ -2.01
NMD5P46970 YIL066W-AYIL066W-A 444 nt2.48□□□□□ -2.01
NMD5P46970 RPL40AYIL148W 387 nt2.48□□□□□ -2.01
NMD5P46970 HSK3YKL138C-A 210 nt2.48□□□□□ -2.01
NMD5P46970 YMR046W-AYMR046W-A 129 nt2.48□□□□□ -2.01
NMD5P46970 YPL182CYPL182C 384 nt2.48□□□□□ -2.01
NMD5P46970 TRM7YBR061C 933 nt2.48□□□□□ -2.01
NMD5P46970 NAB6YML117W 3405 nt2.48□□□□□ -2.01
NMD5P46970 PUF4YGL014W 2667 nt2.47□□□□□ -2.01
NMD5P46970 VPS13YLL040C 9435 nt2.47□□□□□ -2.01
NMD5P46970 YDL062WYDL062W 426 nt2.47□□□□□ -2.01
NMD5P46970 YDL211CYDL211C 1119 nt2.47□□□□□ -2.01
NMD5P46970 YDR406W-AYDR406W-A 246 nt2.47□□□□□ -2.01
NMD5P46970 YER121WYER121W 345 nt2.47□□□□□ -2.01
NMD5P46970 AYR1YIL124W 894 nt2.47□□□□□ -2.01
NMD5P46970 PSK2YOL045W 3306 nt2.46□□□□□ -2.02
NMD5P46970 HTL1YCR020W-B 237 nt2.46□□□□□ -2.02
NMD5P46970 YDR344CYDR344C 444 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms