Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 tR(ACG)LtR(ACG)L 73 nt5.1□□□□□ -1.59
YCK3P39962 tR(ACG)OtR(ACG)O 73 nt5.1□□□□□ -1.59
YCK3P39962 RPL23AYBL087C 414 nt5.1□□□□□ -1.59
YCK3P39962 YGR237CYGR237C 2358 nt5.09□□□□□ -1.59
YCK3P39962 EGT2YNL327W 3126 nt5.09□□□□□ -1.59
YCK3P39962 TTI1YKL033W 3117 nt5.09□□□□□ -1.59
YCK3P39962 YFL034WYFL034W 3222 nt5.08□□□□□ -1.6
YCK3P39962 PRM7YDL039C 2097 nt5.08□□□□□ -1.6
YCK3P39962 MLH2YLR035C 2088 nt5.08□□□□□ -1.6
YCK3P39962 SOD1YJR104C 465 nt5.08□□□□□ -1.6
YCK3P39962 TRP5YGL026C 2124 nt5.08□□□□□ -1.6
YCK3P39962 LHS1YKL073W 2646 nt5.08□□□□□ -1.6
YCK3P39962 YDR193WYDR193W 399 nt5.07□□□□□ -1.6
YCK3P39962 RPG1YBR079C 2895 nt5.07□□□□□ -1.6
YCK3P39962 CRM1YGR218W 3255 nt5.07□□□□□ -1.6
YCK3P39962 EPO1YMR124W 2832 nt5.07□□□□□ -1.6
YCK3P39962 SPO24YPR036W-A 204 nt5.06□□□□□ -1.6
YCK3P39962 TMA108YIL137C 2841 nt5.06□□□□□ -1.6
YCK3P39962 MCM2YBL023C 2607 nt5.06□□□□□ -1.6
YCK3P39962 YFL042CYFL042C 2025 nt5.06□□□□□ -1.6
YCK3P39962 YTA6YPL074W 2265 nt5.06□□□□□ -1.6
YCK3P39962 SIP3YNL257C 3690 nt5.05□□□□□ -1.6
YCK3P39962 GLN4YOR168W 2430 nt5.05□□□□□ -1.6
YCK3P39962 YML116W-AYML116W-A 303 nt5.05□□□□□ -1.6
YCK3P39962 HOR7YMR251W-A 180 nt5.05□□□□□ -1.6
YCK3P39962 DOA1YKL213C 2148 nt5.05□□□□□ -1.6
YCK3P39962 FAP7YDL166C 594 nt5.04□□□□□ -1.6
YCK3P39962 MTC4YBR255W 2085 nt5.04□□□□□ -1.6
YCK3P39962 HIR1YBL008W 2523 nt5.03□□□□□ -1.6
YCK3P39962 DAL81YIR023W 2913 nt5.03□□□□□ -1.6
YCK3P39962 PFF1YBR074W 2931 nt5.03□□□□□ -1.6
YCK3P39962 YDR210WYDR210W 228 nt5.03□□□□□ -1.6
YCK3P39962 YHL006W-AYHL006W-A 354 nt5.03□□□□□ -1.6
YCK3P39962 SRS2YJL092W 3525 nt5.02□□□□□ -1.61
YCK3P39962 STE13YOR219C 2796 nt5.02□□□□□ -1.61
YCK3P39962 MTC5YDR128W 3447 nt5.02□□□□□ -1.61
YCK3P39962 MRPS12YNR036C 462 nt5.02□□□□□ -1.61
YCK3P39962 PXA2YKL188C 2562 nt5.02□□□□□ -1.61
YCK3P39962 YLR154W-BYLR154W-B 165 nt5.01□□□□□ -1.61
YCK3P39962 SWI3YJL176C 2478 nt5□□□□□ -1.61
YCK3P39962 snR76snR76 109 nt5□□□□□ -1.61
YCK3P39962 PUF3YLL013C 2640 nt5□□□□□ -1.61
YCK3P39962 TAF5YBR198C 2397 nt5□□□□□ -1.61
YCK3P39962 SRO77YBL106C 3033 nt4.99□□□□□ -1.61
YCK3P39962 GIP4YAL031C 2283 nt4.99□□□□□ -1.61
YCK3P39962 FLC1YPL221W 2382 nt4.99□□□□□ -1.61
YCK3P39962 RSM22YKL155C 1887 nt4.99□□□□□ -1.61
YCK3P39962 PAU13YHL046C 363 nt4.99□□□□□ -1.61
YCK3P39962 SCD5YOR329C 2619 nt4.99□□□□□ -1.61
YCK3P39962 PUT3YKL015W 2940 nt4.99□□□□□ -1.61
YCK3P39962 KEX2YNL238W 2445 nt4.98□□□□□ -1.61
YCK3P39962 YDL022C-AYDL022C-A 249 nt4.98□□□□□ -1.61
YCK3P39962 RPL41AYDL184C 78 nt4.98□□□□□ -1.61
YCK3P39962 VAM7YGL212W 951 nt4.98□□□□□ -1.61
YCK3P39962 YGR146C-AYGR146C-A 162 nt4.98□□□□□ -1.61
YCK3P39962 GPB2YAL056W 2643 nt4.98□□□□□ -1.61
YCK3P39962 ZDS1YMR273C 2748 nt4.97□□□□□ -1.61
YCK3P39962 PAU11YGL261C 363 nt4.97□□□□□ -1.61
YCK3P39962 MTR4YJL050W 3222 nt4.97□□□□□ -1.61
YCK3P39962 YDR109CYDR109C 2148 nt4.97□□□□□ -1.61
YCK3P39962 HOS3YPL116W 2094 nt4.96□□□□□ -1.61
YCK3P39962 MCM3YEL032W 2916 nt4.96□□□□□ -1.62
YCK3P39962 YMR31YFR049W 372 nt4.96□□□□□ -1.62
YCK3P39962 SUP19tS(UGA)E 82 nt4.96□□□□□ -1.62
YCK3P39962 SUP17tS(UGA)I 82 nt4.96□□□□□ -1.62
YCK3P39962 SUP16tS(UGA)P 82 nt4.96□□□□□ -1.62
YCK3P39962 SUP2tY(GUA)D 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP11tY(GUA)F1 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP6tY(GUA)F2 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP7tY(GUA)J1 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP4tY(GUA)J2 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP5tY(GUA)M1 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP8tY(GUA)M2 75 nt4.96□□□□□ -1.62
YCK3P39962 SUP3tY(GUA)O 75 nt4.96□□□□□ -1.62
YCK3P39962 PAU18YLL064C 363 nt4.96□□□□□ -1.62
YCK3P39962 RSM19YNR037C 276 nt4.96□□□□□ -1.62
YCK3P39962 PAU6YNR076W 363 nt4.96□□□□□ -1.62
YCK3P39962 RAD53YPL153C 2466 nt4.96□□□□□ -1.62
YCK3P39962 IMH1YLR309C 2736 nt4.95□□□□□ -1.62
YCK3P39962 SKP2YNL311C 2292 nt4.95□□□□□ -1.62
YCK3P39962 CIN1YOR349W 3045 nt4.94□□□□□ -1.62
YCK3P39962 YGR266WYGR266W 2106 nt4.94□□□□□ -1.62
YCK3P39962 UBP12YJL197W 3765 nt4.94□□□□□ -1.62
YCK3P39962 YGL036WYGL036W 2730 nt4.94□□□□□ -1.62
YCK3P39962 YDR354C-AYDR354C-A 144 nt4.94□□□□□ -1.62
YCK3P39962 IOC2YLR095C 2439 nt4.94□□□□□ -1.62
YCK3P39962 MGM1YOR211C 2646 nt4.93□□□□□ -1.62
YCK3P39962 PDC1YLR044C 1692 nt4.92□□□□□ -1.62
YCK3P39962 TAH1YCR060W 336 nt4.92□□□□□ -1.62
YCK3P39962 snR40snR40 97 nt4.92□□□□□ -1.62
YCK3P39962 WAR1YML076C 2835 nt4.92□□□□□ -1.62
YCK3P39962 ROT2YBR229C 2865 nt4.92□□□□□ -1.62
YCK3P39962 RPH1YER169W 2391 nt4.91□□□□□ -1.62
YCK3P39962 RRP12YPL012W 3687 nt4.91□□□□□ -1.62
YCK3P39962 PYC1YGL062W 3537 nt4.9□□□□□ -1.62
YCK3P39962 FIR1YER032W 2631 nt4.9□□□□□ -1.62
YCK3P39962 INP53YOR109W 3324 nt4.9□□□□□ -1.63
YCK3P39962 HUL4YJR036C 2679 nt4.9□□□□□ -1.63
YCK3P39962 RDS1YCR106W 2499 nt4.89□□□□□ -1.63
YCK3P39962 SUL1YBR294W 2580 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 117 ms