Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YBL077WYBL077W 432 nt-0.29□□□□□ -2.46
TRA1P38811 YOR108C-AYOR108C-A 210 nt-0.29□□□□□ -2.46
TRA1P38811 TRS20YBR254C 528 nt-0.29□□□□□ -2.46
TRA1P38811 PIG1YLR273C 1947 nt-0.29□□□□□ -2.46
TRA1P38811 CHS6YJL099W 2241 nt-0.29□□□□□ -2.46
TRA1P38811 RPL26BYGR034W 384 nt-0.29□□□□□ -2.46
TRA1P38811 YIL161WYIL161W 708 nt-0.29□□□□□ -2.46
TRA1P38811 YBR071WYBR071W 636 nt-0.29□□□□□ -2.46
TRA1P38811 PDE2YOR360C 1581 nt-0.3□□□□□ -2.46
TRA1P38811 tT(UGU)G1tT(UGU)G1 72 nt-0.3□□□□□ -2.46
TRA1P38811 tT(UGU)G2tT(UGU)G2 72 nt-0.3□□□□□ -2.46
TRA1P38811 tT(UGU)PtT(UGU)P 72 nt-0.3□□□□□ -2.46
TRA1P38811 DLT1YMR126C 1029 nt-0.3□□□□□ -2.46
TRA1P38811 MED8YBR193C 672 nt-0.3□□□□□ -2.46
TRA1P38811 COS12YGL263W 1143 nt-0.3□□□□□ -2.46
TRA1P38811 VMA21YGR105W 234 nt-0.3□□□□□ -2.46
TRA1P38811 YJL127W-AYJL127W-A 117 nt-0.3□□□□□ -2.46
TRA1P38811 SEC8YPR055W 3198 nt-0.3□□□□□ -2.46
TRA1P38811 YEL030C-AYEL030C-A 315 nt-0.3□□□□□ -2.46
TRA1P38811 YLR101CYLR101C 396 nt-0.3□□□□□ -2.46
TRA1P38811 MVP1YMR004W 1536 nt-0.31□□□□□ -2.46
TRA1P38811 SWI5YDR146C 2130 nt-0.31□□□□□ -2.46
TRA1P38811 DIG2YDR480W 972 nt-0.32□□□□□ -2.46
TRA1P38811 MIC19YFR011C 513 nt-0.32□□□□□ -2.46
TRA1P38811 NFU1YKL040C 771 nt-0.32□□□□□ -2.46
TRA1P38811 YKL136WYKL136W 399 nt-0.32□□□□□ -2.46
TRA1P38811 FYV6YNL133C 522 nt-0.32□□□□□ -2.46
TRA1P38811 YOR263CYOR263C 408 nt-0.32□□□□□ -2.46
TRA1P38811 MNE1YOR350C 1992 nt-0.32□□□□□ -2.46
TRA1P38811 YKL183C-AYKL183C-A 213 nt-0.33□□□□□ -2.46
TRA1P38811 YPL197CYPL197C 414 nt-0.33□□□□□ -2.46
TRA1P38811 snR33snR33 183 nt-0.33□□□□□ -2.46
TRA1P38811 MON1YGL124C 1935 nt-0.33□□□□□ -2.46
TRA1P38811 COBQ0105 1158 nt-0.33□□□□□ -2.46
TRA1P38811 GRX7YBR014C 612 nt-0.33□□□□□ -2.46
TRA1P38811 HAL9YOL089C 3093 nt-0.33□□□□□ -2.46
TRA1P38811 AIM44YPL158C 2277 nt-0.33□□□□□ -2.46
TRA1P38811 YLR042CYLR042C 486 nt-0.34□□□□□ -2.46
TRA1P38811 YPR153WYPR153W 423 nt-0.34□□□□□ -2.46
TRA1P38811 MGA1YGR249W 1371 nt-0.34□□□□□ -2.46
TRA1P38811 SSS1YDR086C 243 nt-0.34□□□□□ -2.46
TRA1P38811 YKL111CYKL111C 336 nt-0.35□□□□□ -2.46
TRA1P38811 NME1NME1 340 nt-0.35□□□□□ -2.46
TRA1P38811 YPR148CYPR148C 1308 nt-0.35□□□□□ -2.46
TRA1P38811 GRX8YLR364W 330 nt-0.35□□□□□ -2.47
TRA1P38811 NDD1YOR372C 1665 nt-0.35□□□□□ -2.47
TRA1P38811 YOR169CYOR169C 465 nt-0.35□□□□□ -2.47
TRA1P38811 MMS2YGL087C 414 nt-0.36□□□□□ -2.47
TRA1P38811 PTP2YOR208W 2253 nt-0.36□□□□□ -2.47
TRA1P38811 NOP12YOL041C 1380 nt-0.36□□□□□ -2.47
TRA1P38811 YDR261W-AYDR261W-A 1317 nt-0.36□□□□□ -2.47
TRA1P38811 SEC5YDR166C 2916 nt-0.37□□□□□ -2.47
TRA1P38811 YCR022CYCR022C 345 nt-0.37□□□□□ -2.47
TRA1P38811 SPR2YOR214C 711 nt-0.37□□□□□ -2.47
TRA1P38811 YBR134WYBR134W 402 nt-0.37□□□□□ -2.47
TRA1P38811 MSC6YOR354C 2079 nt-0.37□□□□□ -2.47
TRA1P38811 BDP1YNL039W 1785 nt-0.37□□□□□ -2.47
TRA1P38811 YLR031WYLR031W 561 nt-0.38□□□□□ -2.47
TRA1P38811 YHL009W-AYHL009W-A 1242 nt-0.38□□□□□ -2.47
TRA1P38811 PET111YMR257C 2403 nt-0.39□□□□□ -2.47
TRA1P38811 YPR172WYPR172W 603 nt-0.39□□□□□ -2.47
TRA1P38811 PES4YFR023W 1836 nt-0.39□□□□□ -2.47
TRA1P38811 YBP2YGL060W 1926 nt-0.39□□□□□ -2.47
TRA1P38811 KAR3YPR141C 2190 nt-0.39□□□□□ -2.47
TRA1P38811 PRP42YDR235W 1635 nt-0.39□□□□□ -2.47
TRA1P38811 YCR015CYCR015C 954 nt-0.4□□□□□ -2.47
TRA1P38811 YLL020CYLL020C 306 nt-0.4□□□□□ -2.47
TRA1P38811 YDL187CYDL187C 330 nt-0.41□□□□□ -2.47
TRA1P38811 RTR1YER139C 681 nt-0.41□□□□□ -2.47
TRA1P38811 YGL193CYGL193C 312 nt-0.41□□□□□ -2.47
TRA1P38811 YHR212CYHR212C 336 nt-0.41□□□□□ -2.47
TRA1P38811 YAR060CYAR060C 336 nt-0.41□□□□□ -2.47
TRA1P38811 SFM1YOR021C 642 nt-0.41□□□□□ -2.47
TRA1P38811 NUP120YKL057C 3114 nt-0.41□□□□□ -2.48
TRA1P38811 YDL157CYDL157C 357 nt-0.41□□□□□ -2.48
TRA1P38811 YDL196WYDL196W 330 nt-0.41□□□□□ -2.48
TRA1P38811 ATG10YLL042C 504 nt-0.41□□□□□ -2.48
TRA1P38811 YOL114CYOL114C 609 nt-0.41□□□□□ -2.48
TRA1P38811 NNF2YGR089W 2811 nt-0.42□□□□□ -2.48
TRA1P38811 SLD5YDR489W 885 nt-0.42□□□□□ -2.48
TRA1P38811 YOR282WYOR282W 321 nt-0.42□□□□□ -2.48
TRA1P38811 YTH1YPR107C 627 nt-0.42□□□□□ -2.48
TRA1P38811 snR8snR8 190 nt-0.42□□□□□ -2.48
TRA1P38811 YNL050CYNL050C 813 nt-0.43□□□□□ -2.48
TRA1P38811 RAD61YDR014W 1944 nt-0.43□□□□□ -2.48
TRA1P38811 BIT61YJL058C 1632 nt-0.43□□□□□ -2.48
TRA1P38811 RPM2YML091C 3609 nt-0.43□□□□□ -2.48
TRA1P38811 YIL134C-AYIL134C-A 204 nt-0.43□□□□□ -2.48
TRA1P38811 STB6YKL072W 2301 nt-0.44□□□□□ -2.48
TRA1P38811 UPS2YLR168C 693 nt-0.44□□□□□ -2.48
TRA1P38811 YJR011CYJR011C 786 nt-0.44□□□□□ -2.48
TRA1P38811 RPB10YOR210W 213 nt-0.44□□□□□ -2.48
TRA1P38811 OSH6YKR003W 1347 nt-0.44□□□□□ -2.48
TRA1P38811 MRPL49YJL096W 486 nt-0.44□□□□□ -2.48
TRA1P38811 YEL009C-AYEL009C-A 408 nt-0.45□□□□□ -2.48
TRA1P38811 YEL073CYEL073C 324 nt-0.45□□□□□ -2.48
TRA1P38811 PET130YJL023C 1044 nt-0.45□□□□□ -2.48
TRA1P38811 SBH2YER019C-A 267 nt-0.45□□□□□ -2.48
TRA1P38811 MXR1YER042W 555 nt-0.45□□□□□ -2.48
TRA1P38811 CCE1YKL011C 1062 nt-0.45□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms