Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 MDM32YOR147W 1869 nt1.33□□□□□ -2.2
LDB7P38210 NCA2YPR155C 1851 nt1.33□□□□□ -2.2
LDB7P38210 PET127YOR017W 2403 nt1.32□□□□□ -2.2
LDB7P38210 PHR1YOR386W 1698 nt1.32□□□□□ -2.2
LDB7P38210 RLM1YPL089C 2031 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)E1tH(GUG)E1 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)E2tH(GUG)E2 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)G1tH(GUG)G1 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)G2tH(GUG)G2 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)HtH(GUG)H 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)KtH(GUG)K 72 nt1.32□□□□□ -2.2
LDB7P38210 tH(GUG)MtH(GUG)M 72 nt1.32□□□□□ -2.2
LDB7P38210 YLR140WYLR140W 327 nt1.32□□□□□ -2.2
LDB7P38210 RPL37AYLR185W 267 nt1.32□□□□□ -2.2
LDB7P38210 YNL226WYNL226W 411 nt1.32□□□□□ -2.2
LDB7P38210 SSK2YNR031C 4740 nt1.32□□□□□ -2.2
LDB7P38210 SGD1YLR336C 2700 nt1.32□□□□□ -2.2
LDB7P38210 YFL002W-BYFL002W-B 1317 nt1.32□□□□□ -2.2
LDB7P38210 YGR161W-AYGR161W-A 1317 nt1.32□□□□□ -2.2
LDB7P38210 YBL100W-AYBL100W-A 1317 nt1.32□□□□□ -2.2
LDB7P38210 YCL020WYCL020W 1317 nt1.32□□□□□ -2.2
LDB7P38210 RRI2YOL117W 1938 nt1.32□□□□□ -2.2
LDB7P38210 NUP82YJL061W 2142 nt1.31□□□□□ -2.2
LDB7P38210 CDC25YLR310C 4770 nt1.31□□□□□ -2.2
LDB7P38210 IES5YER092W 378 nt1.31□□□□□ -2.2
LDB7P38210 BMT5YIL096C 1011 nt1.31□□□□□ -2.2
LDB7P38210 RPS7BYNL096C 573 nt1.31□□□□□ -2.2
LDB7P38210 YNL235CYNL235C 432 nt1.31□□□□□ -2.2
LDB7P38210 RPB11YOL005C 363 nt1.31□□□□□ -2.2
LDB7P38210 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
LDB7P38210 YLR419WYLR419W 4308 nt1.31□□□□□ -2.2
LDB7P38210 YIL030W-AYIL030W-A 339 nt1.3□□□□□ -2.2
LDB7P38210 YJL015CYJL015C 285 nt1.3□□□□□ -2.2
LDB7P38210 TIM8YJR135W-A 264 nt1.3□□□□□ -2.2
LDB7P38210 SEC22YLR268W 645 nt1.3□□□□□ -2.2
LDB7P38210 YPR170CYPR170C 336 nt1.3□□□□□ -2.2
LDB7P38210 YBR224WYBR224W 516 nt1.3□□□□□ -2.2
LDB7P38210 FYV8YGR196C 2454 nt1.3□□□□□ -2.2
LDB7P38210 SMY1YKL079W 1971 nt1.3□□□□□ -2.2
LDB7P38210 PEP3YLR148W 2757 nt1.29□□□□□ -2.2
LDB7P38210 MSN5YDR335W 3675 nt1.29□□□□□ -2.2
LDB7P38210 RTR2YDR066C 591 nt1.29□□□□□ -2.2
LDB7P38210 YPL039WYPL039W 951 nt1.29□□□□□ -2.2
LDB7P38210 EST2YLR318W 2655 nt1.29□□□□□ -2.2
LDB7P38210 KAP122YGL016W 3246 nt1.28□□□□□ -2.2
LDB7P38210 MLH3YPL164C 2148 nt1.28□□□□□ -2.2
LDB7P38210 SNF5YBR289W 2718 nt1.28□□□□□ -2.2
LDB7P38210 HKR1YDR420W 5409 nt1.28□□□□□ -2.2
LDB7P38210 YFL012W-AYFL012W-A 375 nt1.28□□□□□ -2.2
LDB7P38210 YIR018C-AYIR018C-A 138 nt1.28□□□□□ -2.2
LDB7P38210 YKL183C-AYKL183C-A 213 nt1.28□□□□□ -2.2
LDB7P38210 SDS22YKL193C 1017 nt1.28□□□□□ -2.2
LDB7P38210 YAL066WYAL066W 309 nt1.28□□□□□ -2.2
LDB7P38210 YPR172WYPR172W 603 nt1.28□□□□□ -2.2
LDB7P38210 ALK1YGL021W 2283 nt1.27□□□□□ -2.21
LDB7P38210 YCR100CYCR100C 951 nt1.27□□□□□ -2.21
LDB7P38210 YLR307C-AYLR307C-A 264 nt1.27□□□□□ -2.21
LDB7P38210 CGI121YML036W 546 nt1.27□□□□□ -2.21
LDB7P38210 YMR304C-AYMR304C-A 351 nt1.27□□□□□ -2.21
LDB7P38210 YMR324CYMR324C 243 nt1.27□□□□□ -2.21
LDB7P38210 LSO2YGR169C-A 279 nt1.26□□□□□ -2.21
LDB7P38210 PIK1YNL267W 3201 nt1.25□□□□□ -2.21
LDB7P38210 RSM22YKL155C 1887 nt1.25□□□□□ -2.21
LDB7P38210 YJL022WYJL022W 309 nt1.25□□□□□ -2.21
LDB7P38210 FMP23YBR047W 528 nt1.25□□□□□ -2.21
LDB7P38210 YCL002CYCL002C 792 nt1.25□□□□□ -2.21
LDB7P38210 KAR3YPR141C 2190 nt1.25□□□□□ -2.21
LDB7P38210 YHR054CYHR054C 1065 nt1.24□□□□□ -2.21
LDB7P38210 YJL119CYJL119C 324 nt1.24□□□□□ -2.21
LDB7P38210 VPS55YJR044C 423 nt1.24□□□□□ -2.21
LDB7P38210 ABM1YJR108W 372 nt1.24□□□□□ -2.21
LDB7P38210 COF1YLL050C 432 nt1.24□□□□□ -2.21
LDB7P38210 IPP1YBR011C 864 nt1.24□□□□□ -2.21
LDB7P38210 YOR152CYOR152C 771 nt1.24□□□□□ -2.21
LDB7P38210 MAD1YGL086W 2250 nt1.24□□□□□ -2.21
LDB7P38210 YGR130CYGR130C 2451 nt1.24□□□□□ -2.21
LDB7P38210 REF2YDR195W 1602 nt1.23□□□□□ -2.21
LDB7P38210 EMC5YIL027C 426 nt1.23□□□□□ -2.21
LDB7P38210 HHT1YBR010W 411 nt1.23□□□□□ -2.21
LDB7P38210 BI4Q0120 1917 nt1.23□□□□□ -2.21
LDB7P38210 YBR184WYBR184W 1572 nt1.22□□□□□ -2.21
LDB7P38210 PKR1YMR123W 369 nt1.22□□□□□ -2.21
LDB7P38210 YBL073WYBL073W 312 nt1.22□□□□□ -2.21
LDB7P38210 MTC7YEL033W 420 nt1.21□□□□□ -2.22
LDB7P38210 TIM10YHR005C-A 282 nt1.21□□□□□ -2.22
LDB7P38210 CIC1YHR052W 1131 nt1.21□□□□□ -2.22
LDB7P38210 RRT15YLR162W-A 189 nt1.21□□□□□ -2.22
LDB7P38210 YMR013C-AYMR013C-A 150 nt1.21□□□□□ -2.22
LDB7P38210 RPL33BYOR234C 324 nt1.21□□□□□ -2.22
LDB7P38210 AZF1YOR113W 2745 nt1.21□□□□□ -2.22
LDB7P38210 IRR1YIL026C 3453 nt1.21□□□□□ -2.22
LDB7P38210 IML1YJR138W 4755 nt1.21□□□□□ -2.22
LDB7P38210 TRM732YMR259C 4263 nt1.2□□□□□ -2.22
LDB7P38210 RVS161YCR009C 798 nt1.2□□□□□ -2.22
LDB7P38210 snR5snR5 204 nt1.2□□□□□ -2.22
LDB7P38210 YGR228WYGR228W 345 nt1.2□□□□□ -2.22
LDB7P38210 YGR265WYGR265W 411 nt1.2□□□□□ -2.22
LDB7P38210 YJR140W-AYJR140W-A 150 nt1.2□□□□□ -2.22
LDB7P38210 CLU1YMR012W 3834 nt1.2□□□□□ -2.22
LDB7P38210 ATP20YPR020W 348 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms