Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	SDS22	YKL193C	1017 nt		1.22	□□□□□ -2.21
MRPS28	P21771	CMS1	YLR003C	876 nt		1.22	□□□□□ -2.21
MRPS28	P21771	YLR140W	YLR140W	327 nt		1.22	□□□□□ -2.21
MRPS28	P21771	URA10	YMR271C	684 nt		1.22	□□□□□ -2.21
MRPS28	P21771	YMR324C	YMR324C	243 nt		1.22	□□□□□ -2.21
MRPS28	P21771	SNC2	YOR327C	348 nt		1.22	□□□□□ -2.21
MRPS28	P21771	YCL002C	YCL002C	792 nt		1.22	□□□□□ -2.21
MRPS28	P21771	CTF4	YPR135W	2784 nt		1.21	□□□□□ -2.22
MRPS28	P21771	BNA7	YDR428C	786 nt		1.21	□□□□□ -2.22
MRPS28	P21771	TIM8	YJR135W-A	264 nt		1.21	□□□□□ -2.22
MRPS28	P21771	YNL226W	YNL226W	411 nt		1.21	□□□□□ -2.22
MRPS28	P21771	GRX5	YPL059W	453 nt		1.21	□□□□□ -2.22
MRPS28	P21771	YBR063C	YBR063C	1215 nt		1.21	□□□□□ -2.22
MRPS28	P21771	YPR172W	YPR172W	603 nt		1.21	□□□□□ -2.22
MRPS28	P21771	YJR029W	YJR029W	5268 nt		1.21	□□□□□ -2.22
MRPS28	P21771	YPR137C-B	YPR137C-B	5268 nt		1.21	□□□□□ -2.22
MRPS28	P21771	RAD9	YDR217C	3930 nt		1.21	□□□□□ -2.22
MRPS28	P21771	MDM20	YOL076W	2391 nt		1.21	□□□□□ -2.22
MRPS28	P21771	NUP82	YJL061W	2142 nt		1.21	□□□□□ -2.22
MRPS28	P21771	BST1	YFL025C	3090 nt		1.2	□□□□□ -2.22
MRPS28	P21771	snR5	snR5	204 nt		1.2	□□□□□ -2.22
MRPS28	P21771	MND1	YGL183C	660 nt		1.2	□□□□□ -2.22
MRPS28	P21771	YNL010W	YNL010W	726 nt		1.2	□□□□□ -2.22
MRPS28	P21771	NOP15	YNL110C	663 nt		1.2	□□□□□ -2.22
MRPS28	P21771	YSW1	YBR148W	1830 nt		1.19	□□□□□ -2.22
MRPS28	P21771	DAS1	YJL149W	1992 nt		1.19	□□□□□ -2.22
MRPS28	P21771	FRK1	YPL141C	2598 nt		1.19	□□□□□ -2.22
MRPS28	P21771	RIC1	YLR039C	3171 nt		1.19	□□□□□ -2.22
MRPS28	P21771	RRI2	YOL117W	1938 nt		1.19	□□□□□ -2.22
MRPS28	P21771	snR83	snR83	306 nt		1.19	□□□□□ -2.22
MRPS28	P21771	MCM22	YJR135C	720 nt		1.19	□□□□□ -2.22
MRPS28	P21771	YMR013C-A	YMR013C-A	150 nt		1.19	□□□□□ -2.22
MRPS28	P21771	TIF11	YMR260C	462 nt		1.19	□□□□□ -2.22
MRPS28	P21771	CTR9	YOL145C	3234 nt		1.19	□□□□□ -2.22
MRPS28	P21771	YPL080C	YPL080C	327 nt		1.19	□□□□□ -2.22
MRPS28	P21771	MMS22	YLR320W	4365 nt		1.19	□□□□□ -2.22
MRPS28	P21771	NOP53	YPL146C	1368 nt		1.19	□□□□□ -2.22
MRPS28	P21771	SEY1	YOR165W	2331 nt		1.18	□□□□□ -2.22
MRPS28	P21771	MSH5	YDL154W	2706 nt		1.18	□□□□□ -2.22
MRPS28	P21771	MDM32	YOR147W	1869 nt		1.18	□□□□□ -2.22
MRPS28	P21771	YHR054C	YHR054C	1065 nt		1.18	□□□□□ -2.22
MRPS28	P21771	RPC25	YKL144C	639 nt		1.18	□□□□□ -2.22
MRPS28	P21771	LCL2	YLR104W	396 nt		1.18	□□□□□ -2.22
MRPS28	P21771	PGA1	YNL158W	597 nt		1.18	□□□□□ -2.22
MRPS28	P21771	DOT6	YER088C	2013 nt		1.18	□□□□□ -2.22
MRPS28	P21771	COX1	Q0045	1605 nt		1.18	□□□□□ -2.22
MRPS28	P21771	TRM732	YMR259C	4263 nt		1.18	□□□□□ -2.22
MRPS28	P21771	IRE1	YHR079C	3348 nt		1.17	□□□□□ -2.22
MRPS28	P21771	YLR149C	YLR149C	2193 nt		1.17	□□□□□ -2.22
MRPS28	P21771	GIC1	YHR061C	945 nt		1.17	□□□□□ -2.22
MRPS28	P21771	YHR214W-A	YHR214W-A	486 nt		1.17	□□□□□ -2.22
MRPS28	P21771	YAR068W	YAR068W	486 nt		1.17	□□□□□ -2.22
MRPS28	P21771	YBL083C	YBL083C	426 nt		1.17	□□□□□ -2.22
MRPS28	P21771	RPB11	YOL005C	363 nt		1.17	□□□□□ -2.22
MRPS28	P21771	HMI1	YOL095C	2121 nt		1.17	□□□□□ -2.22
MRPS28	P21771	RSM22	YKL155C	1887 nt		1.17	□□□□□ -2.22
MRPS28	P21771	MSC6	YOR354C	2079 nt		1.17	□□□□□ -2.22
MRPS28	P21771	ZRG8	YER033C	3231 nt		1.17	□□□□□ -2.22
MRPS28	P21771	MSH3	YCR092C	3057 nt		1.17	□□□□□ -2.22
MRPS28	P21771	NOT5	YPR072W	1683 nt		1.16	□□□□□ -2.22
MRPS28	P21771	YCR043C	YCR043C	384 nt		1.16	□□□□□ -2.22
MRPS28	P21771	YDL068W	YDL068W	330 nt		1.16	□□□□□ -2.22
MRPS28	P21771	YER088C-A	YER088C-A	324 nt		1.16	□□□□□ -2.22
MRPS28	P21771	LSO2	YGR169C-A	279 nt		1.16	□□□□□ -2.22
MRPS28	P21771	SPO11	YHL022C	1197 nt		1.16	□□□□□ -2.22
MRPS28	P21771	SEC22	YLR268W	645 nt		1.16	□□□□□ -2.22
MRPS28	P21771	YNL050C	YNL050C	813 nt		1.16	□□□□□ -2.22
MRPS28	P21771	GPX2	YBR244W	489 nt		1.16	□□□□□ -2.22
MRPS28	P21771	APL1	YJR005W	2103 nt		1.16	□□□□□ -2.22
MRPS28	P21771	KAP122	YGL016W	3246 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)E1	tH(GUG)E1	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)E2	tH(GUG)E2	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)G1	tH(GUG)G1	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)G2	tH(GUG)G2	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)H	tH(GUG)H	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)K	tH(GUG)K	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	tH(GUG)M	tH(GUG)M	72 nt		1.15	□□□□□ -2.23
MRPS28	P21771	YGR228W	YGR228W	345 nt		1.15	□□□□□ -2.23
MRPS28	P21771	IRC19	YLL033W	693 nt		1.15	□□□□□ -2.23
MRPS28	P21771	PET123	YOR158W	957 nt		1.15	□□□□□ -2.23
MRPS28	P21771	LAA1	YJL207C	6045 nt		1.15	□□□□□ -2.23
MRPS28	P21771	DCP2	YNL118C	2913 nt		1.15	□□□□□ -2.23
MRPS28	P21771	Q0255	Q0255	1419 nt		1.15	□□□□□ -2.23
MRPS28	P21771	YFL002W-B	YFL002W-B	1317 nt		1.15	□□□□□ -2.23
MRPS28	P21771	YGR161W-A	YGR161W-A	1317 nt		1.15	□□□□□ -2.23
MRPS28	P21771	YBL100W-A	YBL100W-A	1317 nt		1.15	□□□□□ -2.23
MRPS28	P21771	YCL020W	YCL020W	1317 nt		1.15	□□□□□ -2.23
MRPS28	P21771	MNL2	YLR057W	2550 nt		1.14	□□□□□ -2.23
MRPS28	P21771	RTR2	YDR066C	591 nt		1.14	□□□□□ -2.23
MRPS28	P21771	CIC1	YHR052W	1131 nt		1.14	□□□□□ -2.23
MRPS28	P21771	YMR254C	YMR254C	309 nt		1.14	□□□□□ -2.23
MRPS28	P21771	YBR224W	YBR224W	516 nt		1.14	□□□□□ -2.23
MRPS28	P21771	YGR250C	YGR250C	2346 nt		1.14	□□□□□ -2.23
MRPS28	P21771	SMC4	YLR086W	4257 nt		1.13	□□□□□ -2.23
MRPS28	P21771	YEL018C-A	YEL018C-A	534 nt		1.13	□□□□□ -2.23
MRPS28	P21771	YJL015C	YJL015C	285 nt		1.13	□□□□□ -2.23
MRPS28	P21771	YPL039W	YPL039W	951 nt		1.13	□□□□□ -2.23
MRPS28	P21771	ATP20	YPR020W	348 nt		1.13	□□□□□ -2.23
MRPS28	P21771	SCC2	YDR180W	4482 nt		1.13	□□□□□ -2.23
MRPS28	P21771	MLH3	YPL164C	2148 nt		1.12	□□□□□ -2.23

Retrieved 100 of 7,029 protein–RNA pairs in 111.1 ms