Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 RPO31YOR116C 4383 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 COY1YKL179C 2040 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 KRE5YOR336W 4098 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 YEL043WYEL043W 2871 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 URB2YJR041C 3525 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 YGL024WYGL024W 336 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 RAD54YGL163C 2697 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 TRK1YJL129C 3708 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 CFT2YLR115W 2580 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 SIR3YLR442C 2937 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 RPL20BYOR312C 519 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 YPR003CYPR003C 2265 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 SEG1YMR086W 2883 nt3.57□□□□□ -1.84
TY1A-MR1Q04215 YDR182W-AYDR182W-A 204 nt3.56□□□□□ -1.84
TY1A-MR1Q04215 HEH2YDR458C 1992 nt3.56□□□□□ -1.84
TY1A-MR1Q04215 PLC1YPL268W 2610 nt3.56□□□□□ -1.84
TY1A-MR1Q04215 PRE4YFR050C 801 nt3.55□□□□□ -1.84
TY1A-MR1Q04215 LSO2YGR169C-A 279 nt3.55□□□□□ -1.84
TY1A-MR1Q04215 CDC20YGL116W 1833 nt3.55□□□□□ -1.84
TY1A-MR1Q04215 NPR1YNL183C 2373 nt3.55□□□□□ -1.84
TY1A-MR1Q04215 MCD4YKL165C 2760 nt3.55□□□□□ -1.84
TY1A-MR1Q04215 snR62snR62 100 nt3.54□□□□□ -1.84
TY1A-MR1Q04215 SIP3YNL257C 3690 nt3.54□□□□□ -1.84
TY1A-MR1Q04215 YDR089WYDR089W 2610 nt3.54□□□□□ -1.84
TY1A-MR1Q04215 DBP7YKR024C 2229 nt3.54□□□□□ -1.84
TY1A-MR1Q04215 YKL050CYKL050C 2769 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 YLR154W-AYLR154W-A 186 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 SWC7YLR385C 399 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 YOR218CYOR218C 420 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 MGR2YPL098C 342 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 MTC4YBR255W 2085 nt3.53□□□□□ -1.84
TY1A-MR1Q04215 KAR3YPR141C 2190 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 tS(GCU)Q1tS(GCU)Q1 86 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 YIL174WYIL174W 228 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 YJL222W-AYJL222W-A 228 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 YNL211CYNL211C 261 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 snR191snR191 274 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 YBR221W-AYBR221W-A 105 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 RNR1YER070W 2667 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 SWH1YAR042W 3567 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 YDL176WYDL176W 2127 nt3.52□□□□□ -1.85
TY1A-MR1Q04215 DOT6YER088C 2013 nt3.51□□□□□ -1.85
TY1A-MR1Q04215 ALK2YBL009W 2031 nt3.51□□□□□ -1.85
TY1A-MR1Q04215 MSD1YPL104W 1977 nt3.51□□□□□ -1.85
TY1A-MR1Q04215 MCM10YIL150C 1716 nt3.51□□□□□ -1.85
TY1A-MR1Q04215 YLR154W-BYLR154W-B 165 nt3.51□□□□□ -1.85
TY1A-MR1Q04215 CLN3YAL040C 1743 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 CAF130YGR134W 3369 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 SWI1YPL016W 3945 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 CHD1YER164W 4407 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 PAA1YDR071C 576 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 RPS17BYDR447C 411 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 YOR333CYOR333C 417 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 ZDS1YMR273C 2748 nt3.5□□□□□ -1.85
TY1A-MR1Q04215 IOC2YLR095C 2439 nt3.49□□□□□ -1.85
TY1A-MR1Q04215 SPC105YGL093W 2754 nt3.48□□□□□ -1.85
TY1A-MR1Q04215 YDR193WYDR193W 399 nt3.48□□□□□ -1.85
TY1A-MR1Q04215 EMC6YLL014W 327 nt3.48□□□□□ -1.85
TY1A-MR1Q04215 YPL278CYPL278C 303 nt3.48□□□□□ -1.85
TY1A-MR1Q04215 RIX1YHR197W 2292 nt3.47□□□□□ -1.85
TY1A-MR1Q04215 RAM2YKL019W 951 nt3.47□□□□□ -1.85
TY1A-MR1Q04215 LYP1YNL268W 1836 nt3.47□□□□□ -1.85
TY1A-MR1Q04215 ZRG17YNR039C 1818 nt3.47□□□□□ -1.85
TY1A-MR1Q04215 REG1YDR028C 3045 nt3.46□□□□□ -1.86
TY1A-MR1Q04215 YBL065WYBL065W 345 nt3.46□□□□□ -1.86
TY1A-MR1Q04215 YOR072W-BYOR072W-B 162 nt3.46□□□□□ -1.86
TY1A-MR1Q04215 GSC2YGR032W 5688 nt3.46□□□□□ -1.86
TY1A-MR1Q04215 SPT6YGR116W 4356 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 MSK1YNL073W 1731 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 PAN3YKL025C 2040 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 21S_rRNA21S_rRNA 3296 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 GIN4YDR507C 3429 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 MPT5YGL178W 2580 nt3.45□□□□□ -1.86
TY1A-MR1Q04215 YOL075CYOL075C 3885 nt3.44□□□□□ -1.86
TY1A-MR1Q04215 OST4YDL232W 111 nt3.44□□□□□ -1.86
TY1A-MR1Q04215 ATP7YKL016C 525 nt3.44□□□□□ -1.86
TY1A-MR1Q04215 EFR3YMR212C 2349 nt3.44□□□□□ -1.86
TY1A-MR1Q04215 COS111YBR203W 2775 nt3.44□□□□□ -1.86
TY1A-MR1Q04215 PWP2YCR057C 2772 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 CPA2YJR109C 3357 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 RPL25YOL127W 429 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 PTC5YOR090C 1719 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 ABP140YOR239W 1887 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 ELG1YOR144C 2376 nt3.43□□□□□ -1.86
TY1A-MR1Q04215 MSH2YOL090W 2895 nt3.42□□□□□ -1.86
TY1A-MR1Q04215 YDR246W-AYDR246W-A 201 nt3.42□□□□□ -1.86
TY1A-MR1Q04215 YLR416CYLR416C 399 nt3.42□□□□□ -1.86
TY1A-MR1Q04215 YML116W-AYML116W-A 303 nt3.42□□□□□ -1.86
TY1A-MR1Q04215 DUF1YOL087C 3351 nt3.42□□□□□ -1.86
TY1A-MR1Q04215 RSC1YGR056W 2787 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 FAT1YBR041W 2010 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 CMC4YMR194C-B 222 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 RPS23BYPR132W 438 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 INP2YMR163C 2118 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 YNR065CYNR065C 3351 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 COG3YER157W 2406 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 RRM3YHR031C 2172 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 CIN1YOR349W 3045 nt3.41□□□□□ -1.86
TY1A-MR1Q04215 FOX2YKR009C 2703 nt3.4□□□□□ -1.87
TY1A-MR1Q04215 SLM2YNL047C 1971 nt3.4□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 252.3 ms