Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 COF1YLL050C 432 nt3.51□□□□□ -1.85
MSH6Q03834 RPL22AYLR061W 366 nt3.51□□□□□ -1.85
MSH6Q03834 RPL20BYOR312C 519 nt3.51□□□□□ -1.85
MSH6Q03834 STU2YLR045C 2667 nt3.51□□□□□ -1.85
MSH6Q03834 YIL166CYIL166C 1629 nt3.51□□□□□ -1.85
MSH6Q03834 COG8YML071C 1824 nt3.51□□□□□ -1.85
MSH6Q03834 GLC3YEL011W 2115 nt3.5□□□□□ -1.85
MSH6Q03834 YER121WYER121W 345 nt3.5□□□□□ -1.85
MSH6Q03834 YAL064W-BYAL064W-B 381 nt3.5□□□□□ -1.85
MSH6Q03834 FAR1YJL157C 2493 nt3.5□□□□□ -1.85
MSH6Q03834 ENA2YDR039C 3276 nt3.5□□□□□ -1.85
MSH6Q03834 ENA1YDR040C 3276 nt3.5□□□□□ -1.85
MSH6Q03834 ECM25YJL201W 1800 nt3.49□□□□□ -1.85
MSH6Q03834 MSR1YHR091C 1932 nt3.49□□□□□ -1.85
MSH6Q03834 PSF1YDR013W 627 nt3.49□□□□□ -1.85
MSH6Q03834 YGL052WYGL052W 306 nt3.49□□□□□ -1.85
MSH6Q03834 GPG1YGL121C 381 nt3.49□□□□□ -1.85
MSH6Q03834 YBR121C-AYBR121C-A 159 nt3.49□□□□□ -1.85
MSH6Q03834 MET10YFR030W 3108 nt3.49□□□□□ -1.85
MSH6Q03834 USE1YGL098W 738 nt3.48□□□□□ -1.85
MSH6Q03834 YLR140WYLR140W 327 nt3.48□□□□□ -1.85
MSH6Q03834 YMR141W-AYMR141W-A 225 nt3.48□□□□□ -1.85
MSH6Q03834 YMR324CYMR324C 243 nt3.48□□□□□ -1.85
MSH6Q03834 NTO1YPR031W 2247 nt3.48□□□□□ -1.85
MSH6Q03834 NOP4YPL043W 2058 nt3.48□□□□□ -1.85
MSH6Q03834 VIK1YPL253C 1944 nt3.48□□□□□ -1.85
MSH6Q03834 VTC4YJL012C 2166 nt3.48□□□□□ -1.85
MSH6Q03834 BOI1YBL085W 2943 nt3.47□□□□□ -1.85
MSH6Q03834 SPB1YCL054W 2526 nt3.47□□□□□ -1.85
MSH6Q03834 TFC1YBR123C 1950 nt3.47□□□□□ -1.85
MSH6Q03834 RLF2YPR018W 1821 nt3.47□□□□□ -1.85
MSH6Q03834 YMR172C-AYMR172C-A 384 nt3.47□□□□□ -1.85
MSH6Q03834 SAR1YPL218W 573 nt3.46□□□□□ -1.86
MSH6Q03834 YAT2YER024W 2772 nt3.46□□□□□ -1.86
MSH6Q03834 SET1YHR119W 3243 nt3.46□□□□□ -1.86
MSH6Q03834 PSK2YOL045W 3306 nt3.46□□□□□ -1.86
MSH6Q03834 MDV1YJL112W 2145 nt3.46□□□□□ -1.86
MSH6Q03834 PKH1YDR490C 2301 nt3.45□□□□□ -1.86
MSH6Q03834 RPA135YPR010C 3612 nt3.45□□□□□ -1.86
MSH6Q03834 SPO71YDR104C 3738 nt3.45□□□□□ -1.86
MSH6Q03834 DIA2YOR080W 2199 nt3.45□□□□□ -1.86
MSH6Q03834 YSP2YDR326C 4317 nt3.45□□□□□ -1.86
MSH6Q03834 RPS27AYKL156W 249 nt3.45□□□□□ -1.86
MSH6Q03834 YLR053CYLR053C 327 nt3.45□□□□□ -1.86
MSH6Q03834 GIS2YNL255C 462 nt3.45□□□□□ -1.86
MSH6Q03834 RPL25YOL127W 429 nt3.45□□□□□ -1.86
MSH6Q03834 GCN1YGL195W 8019 nt3.45□□□□□ -1.86
MSH6Q03834 AKR1YDR264C 2295 nt3.45□□□□□ -1.86
MSH6Q03834 YEL025CYEL025C 3567 nt3.44□□□□□ -1.86
MSH6Q03834 RPN1YHR027C 2982 nt3.44□□□□□ -1.86
MSH6Q03834 LSO2YGR169C-A 279 nt3.44□□□□□ -1.86
MSH6Q03834 YHL041WYHL041W 450 nt3.44□□□□□ -1.86
MSH6Q03834 RAM2YKL019W 951 nt3.44□□□□□ -1.86
MSH6Q03834 GCD6YDR211W 2139 nt3.44□□□□□ -1.86
MSH6Q03834 RBK1YCR036W 1002 nt3.43□□□□□ -1.86
MSH6Q03834 TIM11YDR322C-A 291 nt3.43□□□□□ -1.86
MSH6Q03834 RPL36AYMR194W 303 nt3.43□□□□□ -1.86
MSH6Q03834 RIF1YBR275C 5751 nt3.43□□□□□ -1.86
MSH6Q03834 EPL1YFL024C 2499 nt3.43□□□□□ -1.86
MSH6Q03834 SOK1YDR006C 2706 nt3.42□□□□□ -1.86
MSH6Q03834 YMR317WYMR317W 3423 nt3.42□□□□□ -1.86
MSH6Q03834 ITC1YGL133W 3795 nt3.42□□□□□ -1.86
MSH6Q03834 MET5YJR137C 4329 nt3.42□□□□□ -1.86
MSH6Q03834 DLS1YJL065C 504 nt3.42□□□□□ -1.86
MSH6Q03834 MRPL33YMR286W 261 nt3.42□□□□□ -1.86
MSH6Q03834 MIT1YEL007W 2001 nt3.42□□□□□ -1.86
MSH6Q03834 RAD5YLR032W 3510 nt3.42□□□□□ -1.86
MSH6Q03834 KAR3YPR141C 2190 nt3.42□□□□□ -1.86
MSH6Q03834 PUF6YDR496C 1971 nt3.42□□□□□ -1.86
MSH6Q03834 YDR193WYDR193W 399 nt3.41□□□□□ -1.86
MSH6Q03834 QCR7YDR529C 384 nt3.41□□□□□ -1.86
MSH6Q03834 PAU2YEL049W 363 nt3.41□□□□□ -1.86
MSH6Q03834 YJL222W-BYJL222W-B 138 nt3.41□□□□□ -1.86
MSH6Q03834 SOK2YMR016C 2358 nt3.41□□□□□ -1.86
MSH6Q03834 PSO2YMR137C 1986 nt3.41□□□□□ -1.86
MSH6Q03834 APC2YLR127C 2562 nt3.41□□□□□ -1.86
MSH6Q03834 TSC11YER093C 4293 nt3.4□□□□□ -1.86
MSH6Q03834 snR60snR60 104 nt3.4□□□□□ -1.87
MSH6Q03834 tF(GAA)QtF(GAA)Q 75 nt3.4□□□□□ -1.87
MSH6Q03834 YGL063C-AYGL063C-A 150 nt3.4□□□□□ -1.87
MSH6Q03834 RPS21AYKR057W 264 nt3.4□□□□□ -1.87
MSH6Q03834 STE23YLR389C 3084 nt3.4□□□□□ -1.87
MSH6Q03834 YMR122W-AYMR122W-A 255 nt3.4□□□□□ -1.87
MSH6Q03834 YNL010WYNL010W 726 nt3.4□□□□□ -1.87
MSH6Q03834 REC8YPR007C 2043 nt3.4□□□□□ -1.87
MSH6Q03834 DRS2YAL026C 4068 nt3.39□□□□□ -1.87
MSH6Q03834 YER189WYER189W 369 nt3.39□□□□□ -1.87
MSH6Q03834 CYB5YNL111C 363 nt3.39□□□□□ -1.87
MSH6Q03834 YHR080CYHR080C 4038 nt3.39□□□□□ -1.87
MSH6Q03834 CDC20YGL116W 1833 nt3.39□□□□□ -1.87
MSH6Q03834 BCH1YMR237W 2175 nt3.39□□□□□ -1.87
MSH6Q03834 MAK21YDR060W 3078 nt3.39□□□□□ -1.87
MSH6Q03834 DIS3YOL021C 3006 nt3.38□□□□□ -1.87
MSH6Q03834 ASG1YIL130W 2895 nt3.38□□□□□ -1.87
MSH6Q03834 AI2Q0055 2565 nt3.38□□□□□ -1.87
MSH6Q03834 RPL34BYIL052C 366 nt3.38□□□□□ -1.87
MSH6Q03834 BFA1YJR053W 1725 nt3.38□□□□□ -1.87
MSH6Q03834 CHO2YGR157W 2610 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)DtK(UUU)D 73 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)G1tK(UUU)G1 73 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 64.7 ms