Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 KSP1YHR082C 3090 nt3.04□□□□□ -1.92
TY4A-JP47023 YJL070CYJL070C 2667 nt3.04□□□□□ -1.92
TY4A-JP47023 SRB8YCR081W 4284 nt3.03□□□□□ -1.92
TY4A-JP47023 ECM29YHL030W 5607 nt3.03□□□□□ -1.92
TY4A-JP47023 ORC1YML065W 2745 nt3.03□□□□□ -1.92
TY4A-JP47023 YJL222W-BYJL222W-B 138 nt3.03□□□□□ -1.92
TY4A-JP47023 GPI14YJR013W 1212 nt3.03□□□□□ -1.92
TY4A-JP47023 TMA22YJR014W 597 nt3.03□□□□□ -1.92
TY4A-JP47023 YMR158W-BYMR158W-B 321 nt3.03□□□□□ -1.92
TY4A-JP47023 RPL25YOL127W 429 nt3.03□□□□□ -1.92
TY4A-JP47023 SIR3YLR442C 2937 nt3.03□□□□□ -1.93
TY4A-JP47023 YHR078WYHR078W 1659 nt3.02□□□□□ -1.93
TY4A-JP47023 TRS130YMR218C 3309 nt3.02□□□□□ -1.93
TY4A-JP47023 YER023C-AYER023C-A 213 nt3.02□□□□□ -1.93
TY4A-JP47023 UTP30YKR060W 825 nt3.02□□□□□ -1.93
TY4A-JP47023 ROG1YGL144C 2058 nt3.02□□□□□ -1.93
TY4A-JP47023 YDL011CYDL011C 324 nt3.01□□□□□ -1.93
TY4A-JP47023 YDR366CYDR366C 399 nt3.01□□□□□ -1.93
TY4A-JP47023 YFR056CYFR056C 369 nt3.01□□□□□ -1.93
TY4A-JP47023 YGR050CYGR050C 357 nt3.01□□□□□ -1.93
TY4A-JP47023 tW(UCA)QtW(UCA)Q 74 nt3.01□□□□□ -1.93
TY4A-JP47023 YPR146CYPR146C 330 nt3.01□□□□□ -1.93
TY4A-JP47023 DRS2YAL026C 4068 nt3.01□□□□□ -1.93
TY4A-JP47023 RIF1YBR275C 5751 nt3.01□□□□□ -1.93
TY4A-JP47023 RGA2YDR379W 3030 nt3□□□□□ -1.93
TY4A-JP47023 YGL014C-AYGL014C-A 162 nt3□□□□□ -1.93
TY4A-JP47023 YAL042C-AYAL042C-A 378 nt3□□□□□ -1.93
TY4A-JP47023 HSK3YKL138C-A 210 nt3□□□□□ -1.93
TY4A-JP47023 FCF2YLR051C 654 nt3□□□□□ -1.93
TY4A-JP47023 YAR029WYAR029W 225 nt3□□□□□ -1.93
TY4A-JP47023 COA4YLR218C 453 nt3□□□□□ -1.93
TY4A-JP47023 YPL229WYPL229W 621 nt3□□□□□ -1.93
TY4A-JP47023 JIP5YPR169W 1479 nt3□□□□□ -1.93
TY4A-JP47023 STE5YDR103W 2754 nt3□□□□□ -1.93
TY4A-JP47023 YNL018CYNL018C 1839 nt2.99□□□□□ -1.93
TY4A-JP47023 FLO11YIR019C 4104 nt2.99□□□□□ -1.93
TY4A-JP47023 UBP14YBR058C 2346 nt2.99□□□□□ -1.93
TY4A-JP47023 YPR089WYPR089W 2667 nt2.99□□□□□ -1.93
TY4A-JP47023 MRD1YPR112C 2664 nt2.99□□□□□ -1.93
TY4A-JP47023 DAD4YDR320C-A 219 nt2.98□□□□□ -1.93
TY4A-JP47023 HYP2YEL034W 474 nt2.98□□□□□ -1.93
TY4A-JP47023 RGM1YMR182C 636 nt2.98□□□□□ -1.93
TY4A-JP47023 RPL36AYMR194W 303 nt2.98□□□□□ -1.93
TY4A-JP47023 YBL073WYBL073W 312 nt2.98□□□□□ -1.93
TY4A-JP47023 HRD3YLR207W 2502 nt2.98□□□□□ -1.93
TY4A-JP47023 INP52YNL106C 3552 nt2.97□□□□□ -1.93
TY4A-JP47023 SHE2YKL130C 741 nt2.97□□□□□ -1.93
TY4A-JP47023 RPS27AYKL156W 249 nt2.97□□□□□ -1.93
TY4A-JP47023 RPL26AYLR344W 384 nt2.97□□□□□ -1.93
TY4A-JP47023 ISF1YMR081C 1017 nt2.97□□□□□ -1.93
TY4A-JP47023 SAK1YER129W 3429 nt2.97□□□□□ -1.93
TY4A-JP47023 HOS4YIL112W 3252 nt2.97□□□□□ -1.93
TY4A-JP47023 YBP1YBR216C 2025 nt2.97□□□□□ -1.93
TY4A-JP47023 ASG1YIL130W 2895 nt2.96□□□□□ -1.94
TY4A-JP47023 INP51YIL002C 2841 nt2.96□□□□□ -1.94
TY4A-JP47023 PRK1YIL095W 2433 nt2.96□□□□□ -1.94
TY4A-JP47023 HMRA2YCR096C 360 nt2.96□□□□□ -1.94
TY4A-JP47023 RPL40AYIL148W 387 nt2.96□□□□□ -1.94
TY4A-JP47023 MBB1YJL199C 327 nt2.96□□□□□ -1.94
TY4A-JP47023 SAP1YER047C 2694 nt2.96□□□□□ -1.94
TY4A-JP47023 GIN4YDR507C 3429 nt2.96□□□□□ -1.94
TY4A-JP47023 PSD2YGR170W 3417 nt2.96□□□□□ -1.94
TY4A-JP47023 AIM9YER080W 1884 nt2.96□□□□□ -1.94
TY4A-JP47023 SOK2YMR016C 2358 nt2.96□□□□□ -1.94
TY4A-JP47023 PTC5YOR090C 1719 nt2.96□□□□□ -1.94
TY4A-JP47023 VPS64YDR200C 1815 nt2.96□□□□□ -1.94
TY4A-JP47023 PHO2YDL106C 1680 nt2.95□□□□□ -1.94
TY4A-JP47023 LSO2YGR169C-A 279 nt2.95□□□□□ -1.94
TY4A-JP47023 tQ(UUG)BtQ(UUG)B 72 nt2.95□□□□□ -1.94
TY4A-JP47023 EDS1YBR033W 2760 nt2.95□□□□□ -1.94
TY4A-JP47023 CDC20YGL116W 1833 nt2.95□□□□□ -1.94
TY4A-JP47023 GCD6YDR211W 2139 nt2.95□□□□□ -1.94
TY4A-JP47023 PMR1YGL167C 2853 nt2.94□□□□□ -1.94
TY4A-JP47023 KAR3YPR141C 2190 nt2.94□□□□□ -1.94
TY4A-JP47023 snR8snR8 190 nt2.94□□□□□ -1.94
TY4A-JP47023 RPS24AYER074W 408 nt2.94□□□□□ -1.94
TY4A-JP47023 PSY1YKL076C 384 nt2.94□□□□□ -1.94
TY4A-JP47023 MMS1YPR164W 4224 nt2.94□□□□□ -1.94
TY4A-JP47023 NOT5YPR072W 1683 nt2.94□□□□□ -1.94
TY4A-JP47023 NCL1YBL024W 2055 nt2.94□□□□□ -1.94
TY4A-JP47023 CDC24YAL041W 2565 nt2.94□□□□□ -1.94
TY4A-JP47023 YDL025W-AYDL025W-A 105 nt2.93□□□□□ -1.94
TY4A-JP47023 YDR169C-AYDR169C-A 150 nt2.93□□□□□ -1.94
TY4A-JP47023 YDR183C-AYDR183C-A 258 nt2.93□□□□□ -1.94
TY4A-JP47023 YER121WYER121W 345 nt2.93□□□□□ -1.94
TY4A-JP47023 TIM13YGR181W 318 nt2.93□□□□□ -1.94
TY4A-JP47023 SNU114YKL173W 3027 nt2.93□□□□□ -1.94
TY4A-JP47023 RGC1YPR115W 3252 nt2.93□□□□□ -1.94
TY4A-JP47023 OST1YJL002C 1431 nt2.93□□□□□ -1.94
TY4A-JP47023 YDR186CYDR186C 2634 nt2.92□□□□□ -1.94
TY4A-JP47023 ESL1YIL151C 3357 nt2.92□□□□□ -1.94
TY4A-JP47023 YGL024WYGL024W 336 nt2.92□□□□□ -1.94
TY4A-JP47023 YGL239CYGL239C 315 nt2.92□□□□□ -1.94
TY4A-JP47023 YJL020W-AYJL020W-A 258 nt2.92□□□□□ -1.94
TY4A-JP47023 YMR320WYMR320W 306 nt2.92□□□□□ -1.94
TY4A-JP47023 YMR324CYMR324C 243 nt2.92□□□□□ -1.94
TY4A-JP47023 HSC82YMR186W 2118 nt2.92□□□□□ -1.94
TY4A-JP47023 UBP11YKR098C 2154 nt2.91□□□□□ -1.94
TY4A-JP47023 ATG13YPR185W 2217 nt2.91□□□□□ -1.94
TY4A-JP47023 TFC4YGR047C 3078 nt2.91□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms