Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 YLR154C-HYLR154C-H 132 nt3.39□□□□□ -1.87
PUF4P25339 YLR156C-AYLR156C-A 132 nt3.39□□□□□ -1.87
PUF4P25339 YLR157C-CYLR157C-C 132 nt3.39□□□□□ -1.87
PUF4P25339 YLR159C-AYLR159C-A 132 nt3.39□□□□□ -1.87
PUF4P25339 RPS18BYML026C 441 nt3.39□□□□□ -1.87
PUF4P25339 YBL065WYBL065W 345 nt3.39□□□□□ -1.87
PUF4P25339 YOR072W-AYOR072W-A 249 nt3.39□□□□□ -1.87
PUF4P25339 ECM25YJL201W 1800 nt3.39□□□□□ -1.87 RIP-Chip
PUF4P25339 YPP1YGR198W 2454 nt3.38□□□□□ -1.87
PUF4P25339 BNA4YBL098W 1383 nt3.38□□□□□ -1.87
PUF4P25339 APC2YLR127C 2562 nt3.38□□□□□ -1.87
PUF4P25339 YOL155W-AYOL155W-A 135 nt3.38□□□□□ -1.87
PUF4P25339 CDC24YAL041W 2565 nt3.38□□□□□ -1.87
PUF4P25339 GYP7YDL234C 2241 nt3.38□□□□□ -1.87
PUF4P25339 RPS24AYER074W 408 nt3.37□□□□□ -1.87
PUF4P25339 GPI14YJR013W 1212 nt3.37□□□□□ -1.87
PUF4P25339 REV1YOR346W 2958 nt3.37□□□□□ -1.87
PUF4P25339 YIL166CYIL166C 1629 nt3.37□□□□□ -1.87
PUF4P25339 TAF2YCR042C 4224 nt3.36□□□□□ -1.87
PUF4P25339 YJL181WYJL181W 1836 nt3.36□□□□□ -1.87
PUF4P25339 YGR174W-AYGR174W-A 87 nt3.36□□□□□ -1.87
PUF4P25339 APC9YLR102C 798 nt3.36□□□□□ -1.87
PUF4P25339 YBR064WYBR064W 429 nt3.36□□□□□ -1.87
PUF4P25339 NPR2YEL062W 1848 nt3.35□□□□□ -1.87
PUF4P25339 MGR1YCL044C 1254 nt3.35□□□□□ -1.87
PUF4P25339 RRM3YHR031C 2172 nt3.35□□□□□ -1.87
PUF4P25339 RAD61YDR014W 1944 nt3.34□□□□□ -1.87
PUF4P25339 RCY1YJL204C 2523 nt3.34□□□□□ -1.87
PUF4P25339 SSE1YPL106C 2082 nt3.34□□□□□ -1.87
PUF4P25339 CIN8YEL061C 3003 nt3.34□□□□□ -1.87
PUF4P25339 PSK1YAL017W 4071 nt3.34□□□□□ -1.87
PUF4P25339 YIL020C-AYIL020C-A 339 nt3.34□□□□□ -1.87
PUF4P25339 YMR122W-AYMR122W-A 255 nt3.34□□□□□ -1.87
PUF4P25339 YOL057WYOL057W 2136 nt3.34□□□□□ -1.88
PUF4P25339 TRS65YGR166W 1683 nt3.33□□□□□ -1.88
PUF4P25339 NAB6YML117W 3405 nt3.33□□□□□ -1.88
PUF4P25339 snR85snR85 171 nt3.33□□□□□ -1.88
PUF4P25339 YJL020W-AYJL020W-A 258 nt3.33□□□□□ -1.88
PUF4P25339 HSK3YKL138C-A 210 nt3.33□□□□□ -1.88
PUF4P25339 YKR033CYKR033C 426 nt3.33□□□□□ -1.88
PUF4P25339 RPL36BYPL249C-A 303 nt3.33□□□□□ -1.88 RIP-Chip
PUF4P25339 YMR317WYMR317W 3423 nt3.32□□□□□ -1.88
PUF4P25339 snR79snR79 84 nt3.32□□□□□ -1.88
PUF4P25339 MF(ALPHA)1YPL187W 498 nt3.32□□□□□ -1.88
PUF4P25339 AIM9YER080W 1884 nt3.32□□□□□ -1.88
PUF4P25339 DRS2YAL026C 4068 nt3.32□□□□□ -1.88
PUF4P25339 RSE1YML049C 4086 nt3.31□□□□□ -1.88
PUF4P25339 YDL185C-AYDL185C-A 228 nt3.31□□□□□ -1.88
PUF4P25339 SDH6YDR379C-A 240 nt3.31□□□□□ -1.88
PUF4P25339 RPL32YBL092W 393 nt3.31□□□□□ -1.88
PUF4P25339 YOR302WYOR302W 78 nt3.31□□□□□ -1.88
PUF4P25339 TRM7YBR061C 933 nt3.31□□□□□ -1.88 RIP-Chip
PUF4P25339 DUF1YOL087C 3351 nt3.31□□□□□ -1.88
PUF4P25339 SKT5YBL061C 2091 nt3.31□□□□□ -1.88
PUF4P25339 YDR048CYDR048C 315 nt3.3□□□□□ -1.88
PUF4P25339 YJL150WYJL150W 303 nt3.3□□□□□ -1.88
PUF4P25339 YJL222W-BYJL222W-B 138 nt3.3□□□□□ -1.88
PUF4P25339 CCW14YLR390W-A 717 nt3.3□□□□□ -1.88
PUF4P25339 KAP104YBR017C 2757 nt3.3□□□□□ -1.88
PUF4P25339 DBP6YNR038W 1890 nt3.3□□□□□ -1.88
PUF4P25339 VPS64YDR200C 1815 nt3.3□□□□□ -1.88
PUF4P25339 NAB3YPL190C 2409 nt3.3□□□□□ -1.88
PUF4P25339 CSR2YPR030W 3366 nt3.29□□□□□ -1.88
PUF4P25339 YER121WYER121W 345 nt3.29□□□□□ -1.88 RIP-Chip
PUF4P25339 tQ(UUG)BtQ(UUG)B 72 nt3.29□□□□□ -1.88
PUF4P25339 AYR1YIL124W 894 nt3.29□□□□□ -1.88
PUF4P25339 COA4YLR218C 453 nt3.29□□□□□ -1.88
PUF4P25339 HTB2YBL002W 396 nt3.29□□□□□ -1.88 RIP-Chip
PUF4P25339 YOR008C-AYOR008C-A 225 nt3.29□□□□□ -1.88
PUF4P25339 YAT2YER024W 2772 nt3.29□□□□□ -1.88
PUF4P25339 tF(GAA)DtF(GAA)D 73 nt3.28□□□□□ -1.88
PUF4P25339 tF(GAA)NtF(GAA)N 73 nt3.28□□□□□ -1.88
PUF4P25339 NPR3YHL023C 3441 nt3.28□□□□□ -1.88
PUF4P25339 PSY2YNL201C 2577 nt3.28□□□□□ -1.88
PUF4P25339 ITC1YGL133W 3795 nt3.28□□□□□ -1.88
PUF4P25339 RRP5YMR229C 5190 nt3.27□□□□□ -1.89 RIP-Chip
PUF4P25339 YIL082W-AYIL082W-A 4497 nt3.27□□□□□ -1.89
PUF4P25339 DYN2YDR424C 279 nt3.27□□□□□ -1.89
PUF4P25339 YER088C-AYER088C-A 324 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)DtK(UUU)D 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)G1tK(UUU)G1 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)G2tK(UUU)G2 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)KtK(UUU)K 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)LtK(UUU)L 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)OtK(UUU)O 73 nt3.27□□□□□ -1.89
PUF4P25339 tK(UUU)PtK(UUU)P 73 nt3.27□□□□□ -1.89
PUF4P25339 YGL239CYGL239C 315 nt3.27□□□□□ -1.89
PUF4P25339 YIL102CYIL102C 306 nt3.27□□□□□ -1.89
PUF4P25339 RPL40AYIL148W 387 nt3.27□□□□□ -1.89
PUF4P25339 RAM2YKL019W 951 nt3.27□□□□□ -1.89
PUF4P25339 PSO2YMR137C 1986 nt3.27□□□□□ -1.89
PUF4P25339 NUP120YKL057C 3114 nt3.26□□□□□ -1.89 RIP-Chip
PUF4P25339 MVP1YMR004W 1536 nt3.26□□□□□ -1.89
PUF4P25339 YNL010WYNL010W 726 nt3.26□□□□□ -1.89
PUF4P25339 YPR146CYPR146C 330 nt3.26□□□□□ -1.89
PUF4P25339 CHS2YBR038W 2892 nt3.26□□□□□ -1.89
PUF4P25339 RPA190YOR341W 4995 nt3.25□□□□□ -1.89 RIP-Chip
PUF4P25339 MET5YJR137C 4329 nt3.25□□□□□ -1.89
PUF4P25339 NMD2YHR077C 3270 nt3.25□□□□□ -1.89
PUF4P25339 GCN1YGL195W 8019 nt3.25□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 81.5 ms